Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0007_J01
         (542 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U11313-1|AAB41286.1|  547|Homo sapiens sterol carrier protein-X/...   138   1e-32
M75883-1|AAA03557.1|  547|Homo sapiens sterol carrier protein-X/...   138   1e-32
AL445183-3|CAH72590.1|  547|Homo sapiens sterol carrier protein ...   138   1e-32
AB208789-1|BAD92026.1|  406|Homo sapiens sterol carrier protein ...   138   1e-32
BC067108-1|AAH67108.1|  322|Homo sapiens sterol carrier protein ...    70   6e-12

>U11313-1|AAB41286.1|  547|Homo sapiens sterol carrier
           protein-X/sterol carrier protein-2 protein.
          Length = 547

 Score =  138 bits (334), Expect = 1e-32
 Identities = 65/101 (64%), Positives = 79/101 (78%), Gaps = 3/101 (2%)
 Frame = +1

Query: 244 RKVFVVGVGMTNFIKPSTGG--DYPELGKEAVLAALADARIKYDDIQQAVCGYVFGDSTC 417
           R+VFVVGVGMT F+KP      DYP+L +EA   ALADA+I Y  + QA  GYVFGDSTC
Sbjct: 12  RRVFVVGVGMTKFVKPGAENSRDYPDLAEEAGKKALADAQIPYSAVDQACVGYVFGDSTC 71

Query: 418 GQRVLY-QVGMTGIPIYNVNNNCSTGSNALFLSKQLIEGGI 537
           GQR +Y  +GMTGIPI NVNNNC+TGS ALF+++QLI+GG+
Sbjct: 72  GQRAIYHSLGMTGIPIINVNNNCATGSTALFMARQLIQGGV 112


>M75883-1|AAA03557.1|  547|Homo sapiens sterol carrier
           protein-X/sterol carrier protein-2 protein.
          Length = 547

 Score =  138 bits (334), Expect = 1e-32
 Identities = 65/101 (64%), Positives = 79/101 (78%), Gaps = 3/101 (2%)
 Frame = +1

Query: 244 RKVFVVGVGMTNFIKPSTGG--DYPELGKEAVLAALADARIKYDDIQQAVCGYVFGDSTC 417
           R+VFVVGVGMT F+KP      DYP+L +EA   ALADA+I Y  + QA  GYVFGDSTC
Sbjct: 12  RRVFVVGVGMTKFVKPGAENSRDYPDLAEEAGKKALADAQIPYSAVDQACVGYVFGDSTC 71

Query: 418 GQRVLY-QVGMTGIPIYNVNNNCSTGSNALFLSKQLIEGGI 537
           GQR +Y  +GMTGIPI NVNNNC+TGS ALF+++QLI+GG+
Sbjct: 72  GQRAIYHSLGMTGIPIINVNNNCATGSTALFMARQLIQGGV 112


>AL445183-3|CAH72590.1|  547|Homo sapiens sterol carrier protein 2
           protein.
          Length = 547

 Score =  138 bits (334), Expect = 1e-32
 Identities = 65/101 (64%), Positives = 79/101 (78%), Gaps = 3/101 (2%)
 Frame = +1

Query: 244 RKVFVVGVGMTNFIKPSTGG--DYPELGKEAVLAALADARIKYDDIQQAVCGYVFGDSTC 417
           R+VFVVGVGMT F+KP      DYP+L +EA   ALADA+I Y  + QA  GYVFGDSTC
Sbjct: 12  RRVFVVGVGMTKFVKPGAENSRDYPDLAEEAGKKALADAQIPYSAVDQACVGYVFGDSTC 71

Query: 418 GQRVLY-QVGMTGIPIYNVNNNCSTGSNALFLSKQLIEGGI 537
           GQR +Y  +GMTGIPI NVNNNC+TGS ALF+++QLI+GG+
Sbjct: 72  GQRAIYHSLGMTGIPIINVNNNCATGSTALFMARQLIQGGV 112


>AB208789-1|BAD92026.1|  406|Homo sapiens sterol carrier protein X
           isoform 1 proprotein variant protein.
          Length = 406

 Score =  138 bits (334), Expect = 1e-32
 Identities = 65/101 (64%), Positives = 79/101 (78%), Gaps = 3/101 (2%)
 Frame = +1

Query: 244 RKVFVVGVGMTNFIKPSTGG--DYPELGKEAVLAALADARIKYDDIQQAVCGYVFGDSTC 417
           R+VFVVGVGMT F+KP      DYP+L +EA   ALADA+I Y  + QA  GYVFGDSTC
Sbjct: 52  RRVFVVGVGMTKFVKPGAENSRDYPDLAEEAGKKALADAQIPYSAVDQACVGYVFGDSTC 111

Query: 418 GQRVLY-QVGMTGIPIYNVNNNCSTGSNALFLSKQLIEGGI 537
           GQR +Y  +GMTGIPI NVNNNC+TGS ALF+++QLI+GG+
Sbjct: 112 GQRAIYHSLGMTGIPIINVNNNCATGSTALFMARQLIQGGV 152


>BC067108-1|AAH67108.1|  322|Homo sapiens sterol carrier protein 2
           protein.
          Length = 322

 Score = 69.7 bits (163), Expect = 6e-12
 Identities = 34/60 (56%), Positives = 41/60 (68%), Gaps = 2/60 (3%)
 Frame = +1

Query: 244 RKVFVVGVGMTNFIKPSTGG--DYPELGKEAVLAALADARIKYDDIQQAVCGYVFGDSTC 417
           R+VFVVGVGMT F+KP      DYP+L +EA   ALADA+I Y  + QA  GYVFG + C
Sbjct: 12  RRVFVVGVGMTKFVKPGAENSRDYPDLAEEAGKKALADAQIPYSAVDQACVGYVFGVAEC 71


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,736,354
Number of Sequences: 237096
Number of extensions: 1607537
Number of successful extensions: 2571
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2520
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2560
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5308067764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)