Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0007_J01
(542 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D86473-1|BAA20377.1| 412|Caenorhabditis elegans 3-keto-acyl-CoA... 136 1e-32
AL023847-7|CAA19548.1| 412|Caenorhabditis elegans Hypothetical ... 136 1e-32
U41105-4|AAA82397.2| 407|Caenorhabditis elegans 3-ketoacyl-coa ... 39 0.003
U41105-8|AAA82403.1| 460|Caenorhabditis elegans Hypothetical pr... 36 0.025
Z81546-11|CAB04455.2| 394|Caenorhabditis elegans Hypothetical p... 32 0.23
M77697-2|AAA27897.2| 448|Caenorhabditis elegans Hypothetical pr... 28 3.8
AC024765-2|AAF60523.3| 345|Caenorhabditis elegans Hypothetical ... 28 3.8
U42830-3|AAC48275.1| 195|Caenorhabditis elegans Hypothetical pr... 27 6.6
AL021448-1|CAA16276.2| 898|Caenorhabditis elegans Hypothetical ... 27 6.6
AF233290-1|AAF62516.1| 898|Caenorhabditis elegans maternal-effe... 27 6.6
AF038612-1|AAB92043.1| 348|Caenorhabditis elegans Hypothetical ... 27 6.6
AY373340-1|AAQ76550.1| 1007|Caenorhabditis elegans BAM-2 protein. 27 8.7
AC024853-1|AAO21419.1| 1007|Caenorhabditis elegans Branching abn... 27 8.7
>D86473-1|BAA20377.1| 412|Caenorhabditis elegans 3-keto-acyl-CoA
thiolase protein.
Length = 412
Score = 136 bits (329), Expect = 1e-32
Identities = 61/98 (62%), Positives = 77/98 (78%), Gaps = 2/98 (2%)
Frame = +1
Query: 247 KVFVVGVGMTNFIKPST--GGDYPELGKEAVLAALADARIKYDDIQQAVCGYVFGDSTCG 420
KV++VGVGMT F KP + G DYP++ KEAV AL D ++KY DIQQA GY+FG + CG
Sbjct: 7 KVYIVGVGMTKFCKPGSVPGWDYPDMVKEAVTTALDDCKMKYSDIQQATVGYLFGGTCCG 66
Query: 421 QRVLYQVGMTGIPIYNVNNNCSTGSNALFLSKQLIEGG 534
QR LY+VG+TGIPI+NVNN C++GS+ LFL KQ+IE G
Sbjct: 67 QRALYEVGLTGIPIFNVNNACASGSSGLFLGKQIIESG 104
>AL023847-7|CAA19548.1| 412|Caenorhabditis elegans Hypothetical
protein Y57A10C.6 protein.
Length = 412
Score = 136 bits (329), Expect = 1e-32
Identities = 61/98 (62%), Positives = 77/98 (78%), Gaps = 2/98 (2%)
Frame = +1
Query: 247 KVFVVGVGMTNFIKPST--GGDYPELGKEAVLAALADARIKYDDIQQAVCGYVFGDSTCG 420
KV++VGVGMT F KP + G DYP++ KEAV AL D ++KY DIQQA GY+FG + CG
Sbjct: 7 KVYIVGVGMTKFCKPGSVPGWDYPDMVKEAVTTALDDCKMKYSDIQQATVGYLFGGTCCG 66
Query: 421 QRVLYQVGMTGIPIYNVNNNCSTGSNALFLSKQLIEGG 534
QR LY+VG+TGIPI+NVNN C++GS+ LFL KQ+IE G
Sbjct: 67 QRALYEVGLTGIPIFNVNNACASGSSGLFLGKQIIESG 104
>U41105-4|AAA82397.2| 407|Caenorhabditis elegans 3-ketoacyl-coa
thiolase protein 1 protein.
Length = 407
Score = 38.7 bits (86), Expect = 0.003
Identities = 30/105 (28%), Positives = 45/105 (42%), Gaps = 8/105 (7%)
Frame = +1
Query: 244 RKVFVVGVGMT---NFIKPSTGGDYPELGKEAVLAALADARIKYDDIQQAVCGYVFGDST 414
+ F+VG T +F + PEL A+ AAL +K IQ+ G V +
Sbjct: 22 KHAFIVGAARTPIGSFRSSLSSVTAPELASVAIKAALERGAVKPSSIQEVFLGQVC-QAN 80
Query: 415 CGQRVLYQVGM-----TGIPIYNVNNNCSTGSNALFLSKQLIEGG 534
GQ Q + + + VN CS+G A+ L+ Q I+ G
Sbjct: 81 AGQAPARQAALGAGLDLSVAVTTVNKVCSSGLKAIILAAQQIQTG 125
>U41105-8|AAA82403.1| 460|Caenorhabditis elegans Hypothetical
protein T02G5.4 protein.
Length = 460
Score = 35.5 bits (78), Expect = 0.025
Identities = 30/106 (28%), Positives = 45/106 (42%), Gaps = 9/106 (8%)
Frame = +1
Query: 244 RKVFVVGVGMT---NFIKPSTGGDYPELGKEAVLAALADARIKYDDIQQA------VCGY 396
+ F+VG T +F + PEL A+ AAL +K IQ+A VC
Sbjct: 100 KDAFIVGAARTPIGSFRSSLSSVTAPELASVAIKAALERGAVKPSSIQEANVFLGQVCHA 159
Query: 397 VFGDSTCGQRVLYQVGMTGIPIYNVNNNCSTGSNALFLSKQLIEGG 534
G ++ Q L + + VN S+G A+ L+ Q I+ G
Sbjct: 160 NAGQASARQAALGAGLDLSVAVTTVNKGWSSGMKAIILAAQQIQTG 205
>Z81546-11|CAB04455.2| 394|Caenorhabditis elegans Hypothetical
protein F53A2.7 protein.
Length = 394
Score = 32.3 bits (70), Expect = 0.23
Identities = 30/103 (29%), Positives = 44/103 (42%), Gaps = 8/103 (7%)
Frame = +1
Query: 250 VFVVGVGMT---NFIKPSTGGDYPELGKEAVLAALADARIKYDDIQQAVCGYVFGDSTCG 420
VF+VG T F G +LG A AAL A + D + + G V S G
Sbjct: 6 VFIVGAKRTAFGTFGGKLKGLSATDLGVVASQAALKHANVGADAVDHVIFGNVVASSRDG 65
Query: 421 QRVLYQVGM-TGIP----IYNVNNNCSTGSNALFLSKQLIEGG 534
+ +G+ +G+P VN C +G A+ + Q I+ G
Sbjct: 66 IYLSRHIGLKSGVPQNVGALTVNRLCGSGFQAVVNAAQAIKLG 108
>M77697-2|AAA27897.2| 448|Caenorhabditis elegans Hypothetical
protein B0303.3 protein.
Length = 448
Score = 28.3 bits (60), Expect = 3.8
Identities = 18/77 (23%), Positives = 31/77 (40%), Gaps = 2/77 (2%)
Frame = +1
Query: 235 NMPRKVFVVGVGMTNFIKPSTGGDYP--ELGKEAVLAALADARIKYDDIQQAVCGYVFGD 408
NMP V V V + + D +L KEA+ A + ++ Y+ + +CG V +
Sbjct: 22 NMPNIVLVDAVRTPFVVSGTVFKDLMAVDLQKEAIKALVEKTKLPYEQLDHIICGTVIQE 81
Query: 409 STCGQRVLYQVGMTGIP 459
+ G+P
Sbjct: 82 CKTSNIAREAALLAGVP 98
>AC024765-2|AAF60523.3| 345|Caenorhabditis elegans Hypothetical
protein Y39A3CR.6 protein.
Length = 345
Score = 28.3 bits (60), Expect = 3.8
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = -1
Query: 542 SHMPPSMSCLDKNSAFEPVEQLLFTL*IGIPVIPTWYKTRWPQVESP 402
S M SM+C K SA +P E +L + +P +P P + SP
Sbjct: 163 SFMAKSMTCRIKESAEKPTETVLVCVPDELPALPVTVPKAPPILASP 209
>U42830-3|AAC48275.1| 195|Caenorhabditis elegans Hypothetical
protein C53B7.2 protein.
Length = 195
Score = 27.5 bits (58), Expect = 6.6
Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Frame = -2
Query: 484 NSCCSHCR*VY-RSYQPGTRLAGRKSNHRIHNHRLLAEC 371
N C VY R+ + L+ S HR H+HR EC
Sbjct: 104 NGYCGAASGVYTRTVVSSSSLSSSSSGHRHHSHRSQGEC 142
>AL021448-1|CAA16276.2| 898|Caenorhabditis elegans Hypothetical
protein Y2H9A.1 protein.
Length = 898
Score = 27.5 bits (58), Expect = 6.6
Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
Frame = +1
Query: 199 FVKRYSTKTNFTNMPRKVFVVGVGMTNFIKPSTGGDYPELGKEAVLAALADARIKYDDIQ 378
FV KT FT++PRK V T + G P+ + V+ + D+
Sbjct: 87 FVDTDYPKTTFTHVPRKFLSVS-PFTPIEADAEGEFLPDADSKCVICHEEKDKTGKSDL- 144
Query: 379 QAVC-GYVFGDSTCGQRVLYQVGM 447
C GY+ G+ G+R+L + M
Sbjct: 145 -ITCHGYINGEMDDGKRLLGNIPM 167
>AF233290-1|AAF62516.1| 898|Caenorhabditis elegans maternal-effect
sterile 4 protein.
Length = 898
Score = 27.5 bits (58), Expect = 6.6
Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
Frame = +1
Query: 199 FVKRYSTKTNFTNMPRKVFVVGVGMTNFIKPSTGGDYPELGKEAVLAALADARIKYDDIQ 378
FV KT FT++PRK V T + G P+ + V+ + D+
Sbjct: 87 FVDTDYPKTTFTHVPRKFLSVS-PFTPIEADAEGEFLPDADSKCVICHEEKDKTGKSDL- 144
Query: 379 QAVC-GYVFGDSTCGQRVLYQVGM 447
C GY+ G+ G+R+L + M
Sbjct: 145 -ITCHGYINGEMDDGKRLLGNIPM 167
>AF038612-1|AAB92043.1| 348|Caenorhabditis elegans Hypothetical
protein F13B6.1 protein.
Length = 348
Score = 27.5 bits (58), Expect = 6.6
Identities = 23/108 (21%), Positives = 42/108 (38%)
Frame = +1
Query: 193 DVFVKRYSTKTNFTNMPRKVFVVGVGMTNFIKPSTGGDYPELGKEAVLAALADARIKYDD 372
+V + + F +P +V ++ I+ T D EL + A IKY+
Sbjct: 148 NVVIGKNQVLNGFVGLPDSKDMVQFFDSDSIEGLTNYDQLELPMDMFHFTSNSADIKYEI 207
Query: 373 IQQAVCGYVFGDSTCGQRVLYQVGMTGIPIYNVNNNCSTGSNALFLSK 516
A G G S + G G Y++NN+ +++F+ +
Sbjct: 208 TYAARKGITIGSSGLLMTDSFPTGTFGTNDYDLNNSKGVNVDSIFIPR 255
>AY373340-1|AAQ76550.1| 1007|Caenorhabditis elegans BAM-2 protein.
Length = 1007
Score = 27.1 bits (57), Expect = 8.7
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +1
Query: 19 VT*SKPEESWTLVTIDSLS*TF*SIDILAISDPFNLYHQ 135
VT ++ E+ W+ V + L ++ + AIS P N+ HQ
Sbjct: 759 VTAAETEDEWSSVIVHDLGLSYEYDEHFAISHPSNVIHQ 797
>AC024853-1|AAO21419.1| 1007|Caenorhabditis elegans Branching
abnormal protein 2 protein.
Length = 1007
Score = 27.1 bits (57), Expect = 8.7
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +1
Query: 19 VT*SKPEESWTLVTIDSLS*TF*SIDILAISDPFNLYHQ 135
VT ++ E+ W+ V + L ++ + AIS P N+ HQ
Sbjct: 759 VTAAETEDEWSSVIVHDLGLSYEYDEHFAISHPSNVIHQ 797
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,706,279
Number of Sequences: 27780
Number of extensions: 262372
Number of successful extensions: 602
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 589
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 599
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1091917214
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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