Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0007_I24
(584 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC777.10c |ubc12||ubiquitin conjugating enzyme Ubc12|Schizosac... 194 6e-51
SPBC119.02 |ubc4||ubiquitin conjugating enzyme Ubc4|Schizosaccha... 100 1e-22
SPAC1250.03 |ubc14||ubiquitin conjugating enzyme Ubc14|Schizosac... 92 5e-20
SPAC11E3.04c |ubc13|spu13|ubiquitin conjugating enzyme Ubc13|Sch... 89 4e-19
SPCC1259.15c |ubc11|ubcdp, ubcp4|ubiquitin conjugating enzyme E2... 89 4e-19
SPBC2D10.20 |ubc1||ubiquitin conjugating enzyme Ubc1|Schizosacch... 86 4e-18
SPBC1105.09 |ubc15||ubiquitin conjugating enzyme Ubc15|Schizosac... 80 3e-16
SPAC18B11.07c |rhp6|ubc2|Rad6 homolog, ubiquitin conjugating enz... 77 2e-15
SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme Hus5|Schizosacch... 73 3e-14
SPBC1198.09 |ubc16||ubiquitin conjugating enzyme Ubc16|Schizosac... 66 4e-12
SPBP16F5.04 |ubc3|ubcp3|ubiquitin conjugating enzyme Ubc3|Schizo... 65 8e-12
SPBC211.07c |ubc8||ubiquitin conjugating enzyme Ubc8|Schizosacch... 63 3e-11
SPAC10F6.05c |ubc6||ubiquitin conjugating enzyme Ubc6|Schizosacc... 32 0.071
SPBC800.03 |clr3||histone deacetylase |Schizosaccharomyces pombe... 26 4.7
SPAC4F10.04 |||protein phosphatase type 2A, intrinsic regulator ... 25 6.2
SPAC6F6.17 |rif1|tap1, tap11, SPAPJ736.01|telomere length regula... 25 6.2
>SPCC777.10c |ubc12||ubiquitin conjugating enzyme
Ubc12|Schizosaccharomyces pombe|chr 3|||Manual
Length = 177
Score = 194 bits (474), Expect = 6e-51
Identities = 94/179 (52%), Positives = 121/179 (67%)
Frame = +1
Query: 46 MIKLFSLKQQKKDEEGSARAGGSQKKASAAQLRITKDLNELNLPKTCSTEFSDPDDLLNF 225
M K++ LK KK+ + A G S AQ+RI KD+ +L +P T ST + DP L
Sbjct: 1 MRKIWELK--KKEAQKEKNASG----ISPAQIRIQKDVTDLEIPSTMSTSWPDPIKLNVL 54
Query: 226 KLIICPDEGFYRGGRFIFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVCLNILREDWK 405
L I PDEG+Y+GG+F F ++ NYPH+PPKVKC +YHPNID+EGNVCLNILR+DW
Sbjct: 55 HLEIRPDEGYYKGGKFKFRIQIDDNYPHDPPKVKCLNKIYHPNIDIEGNVCLNILRQDWN 114
Query: 406 PVLTVNSIVYGLQYLFLEPNPEDPLNKEAADELQSNRRLFEQHVQRAMRGGYVGSNYFE 582
PVL +NSI+ GLQ+LFL PN EDPLNKEAA +L + + F V+ AM+GG V F+
Sbjct: 115 PVLNLNSILVGLQFLFLSPNAEDPLNKEAAADLHKDPQGFASRVRTAMKGGLVNGISFD 173
>SPBC119.02 |ubc4||ubiquitin conjugating enzyme
Ubc4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 147
Score = 100 bits (240), Expect = 1e-22
Identities = 50/132 (37%), Positives = 77/132 (58%), Gaps = 3/132 (2%)
Frame = +1
Query: 142 RITKDLNELNL--PKTCSTEFSDPDDLLNFKLIIC-PDEGFYRGGRFIFSFKVGPNYPHE 312
RI ++L +L P +CS DDL +++ I P + Y GG F S +YP +
Sbjct: 5 RINRELADLGKDPPSSCSAG-PVGDDLFHWQATIMGPADSPYAGGVFFLSIHFPTDYPFK 63
Query: 313 PPKVKCETAVYHPNIDLEGNVCLNILREDWKPVLTVNSIVYGLQYLFLEPNPEDPLNKEA 492
PPKV T +YHPNI+ G++CL+ILR+ W P LT++ ++ + L +PNP+DPL E
Sbjct: 64 PPKVNFTTRIYHPNINSNGSICLDILRDQWSPALTISKVLLSICSLLTDPNPDDPLVPEI 123
Query: 493 ADELQSNRRLFE 528
A +++R +E
Sbjct: 124 AHVYKTDRSRYE 135
>SPAC1250.03 |ubc14||ubiquitin conjugating enzyme
Ubc14|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 92.3 bits (219), Expect = 5e-20
Identities = 40/98 (40%), Positives = 63/98 (64%), Gaps = 1/98 (1%)
Frame = +1
Query: 241 PDEGFYRGGRFIFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVCLNILRED-WKPVLT 417
P + Y GG+F FS K +YP +PP ++ T +YHPN D EGNVCL IL++ +KP +
Sbjct: 46 PSDSVYAGGKFHFSLKFPLDYPFQPPTIEFTTRIYHPNFDSEGNVCLAILKQQVFKPSIK 105
Query: 418 VNSIVYGLQYLFLEPNPEDPLNKEAADELQSNRRLFEQ 531
+ S++ + L EPNP+DPL A++ +++R F++
Sbjct: 106 LRSVLEQILQLLREPNPDDPLVASIAEQYRNDRPSFDK 143
>SPAC11E3.04c |ubc13|spu13|ubiquitin conjugating enzyme
Ubc13|Schizosaccharomyces pombe|chr 1|||Manual
Length = 148
Score = 89.0 bits (211), Expect = 4e-19
Identities = 43/126 (34%), Positives = 67/126 (53%), Gaps = 2/126 (1%)
Frame = +1
Query: 142 RITKDLNELNL-PKTCSTEFSDPDDLLNFKLII-CPDEGFYRGGRFIFSFKVGPNYPHEP 315
RI K++ L P D+L FK+ + P + Y GG+F + YP P
Sbjct: 6 RIIKEIETLTRDPPPGIVAAPTEDNLRYFKITMEGPQQSAYEGGKFHLELFLPDEYPMMP 65
Query: 316 PKVKCETAVYHPNIDLEGNVCLNILREDWKPVLTVNSIVYGLQYLFLEPNPEDPLNKEAA 495
P V+ T +YHPN+D G +CL+ L++DW P L + +++ +Q L PNP+DPL+ + A
Sbjct: 66 PNVRFLTKIYHPNVDKLGRICLSTLKKDWSPALQIRTVLLSIQALMGAPNPDDPLDNDVA 125
Query: 496 DELQSN 513
+ N
Sbjct: 126 KIWKEN 131
>SPCC1259.15c |ubc11|ubcdp, ubcp4|ubiquitin conjugating enzyme E2-C
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 176
Score = 89.0 bits (211), Expect = 4e-19
Identities = 49/142 (34%), Positives = 79/142 (55%), Gaps = 3/142 (2%)
Frame = +1
Query: 82 DEEGSARAGGSQKKASAAQLRITKDLNELNLPKTCS-TEFSDPD-DLLNFK-LIICPDEG 252
+ + S+ AG + S + R+ +L L + T + F D D +LL++ I P +
Sbjct: 13 NSKNSSSAGMAVDGHSVTK-RLRSELMSLMMSNTPGISAFPDSDSNLLHWAGTITGPSDT 71
Query: 253 FYRGGRFIFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVCLNILREDWKPVLTVNSIV 432
+Y G +F S NYP+ PP + + ++HPN+D+ GN+CL+IL++ W V V +I+
Sbjct: 72 YYEGLKFKISMSFPANYPYSPPTIIFTSPMWHPNVDMSGNICLDILKDKWSAVYNVQTIL 131
Query: 433 YGLQYLFLEPNPEDPLNKEAAD 498
LQ L EPN PLN +AA+
Sbjct: 132 LSLQSLLGEPNNASPLNAQAAE 153
>SPBC2D10.20 |ubc1||ubiquitin conjugating enzyme
Ubc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 217
Score = 85.8 bits (203), Expect = 4e-18
Identities = 43/131 (32%), Positives = 71/131 (54%), Gaps = 3/131 (2%)
Frame = +1
Query: 142 RITKDLNELNLPKTCSTE-FSDPDDLLNFKLIICPDEGF-YRGGRFIFSFKVGPNYPHEP 315
RI K+L ++ K + ++ DD+ + K + EG Y GG F+ ++ +YP P
Sbjct: 8 RIAKELADVQQDKQAGIQVWTINDDISHLKGMFRGPEGTPYEGGYFVVDIEIPIDYPFRP 67
Query: 316 PKVKCETAVYHPNIDLE-GNVCLNILREDWKPVLTVNSIVYGLQYLFLEPNPEDPLNKEA 492
PK+ +T +YHPN+ + G +CL+IL++ W PV T+ S + LQ L P P +P + +
Sbjct: 68 PKMNFDTKIYHPNVSSQTGAICLDILKDQWSPVYTMKSALISLQSLLCTPEPSNPQDAQV 127
Query: 493 ADELQSNRRLF 525
A N + F
Sbjct: 128 AQVYLQNYQQF 138
>SPBC1105.09 |ubc15||ubiquitin conjugating enzyme
Ubc15|Schizosaccharomyces pombe|chr 2|||Manual
Length = 167
Score = 79.8 bits (188), Expect = 3e-16
Identities = 49/159 (30%), Positives = 81/159 (50%), Gaps = 16/159 (10%)
Frame = +1
Query: 124 ASAAQLRITKDLNEL--NLPKTCSTEFSDPDDLLNFK-LIICPDEGFYRGGRFIFSFKVG 294
+SA++ + K L E+ N P+ S D + ++ +II P++ Y GG F +
Sbjct: 3 SSASEQLLRKQLKEIQKNPPQGFSVGLVDDKSIFEWEVMIIGPEDTLYEGGFFHATLSFP 62
Query: 295 PNYPHEPPKVKCETAVYHPNIDLEGNVCLNILR-------------EDWKPVLTVNSIVY 435
+YP PPK+K T ++HPN+ G VC++IL E W PV + +I+
Sbjct: 63 QDYPLMPPKMKFTTEIWHPNVHPNGEVCISILHPPGDDKYGYEDAGERWLPVHSPETILI 122
Query: 436 GLQYLFLEPNPEDPLNKEAADELQSNRRLFEQHVQRAMR 552
+ + PN E P N +AA E + N + F++ V+R +R
Sbjct: 123 SVISMLSSPNDESPANIDAAKEFRENPQEFKKRVRRLVR 161
>SPAC18B11.07c |rhp6|ubc2|Rad6 homolog, ubiquitin conjugating enzyme
E2 Rhp6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 151
Score = 77.0 bits (181), Expect = 2e-15
Identities = 40/148 (27%), Positives = 72/148 (48%), Gaps = 2/148 (1%)
Frame = +1
Query: 124 ASAAQLRITKDLNELNLPKTCSTEFSDPDD--LLNFKLIICPDEGFYRGGRFIFSFKVGP 297
++ A+ R+ +D + S D +L +II P + + G F
Sbjct: 2 STTARRRLMRDFKRMQQDPPAGVSASPVSDNVMLWNAVIIGPADTPFEDGTFKLVLSFDE 61
Query: 298 NYPHEPPKVKCETAVYHPNIDLEGNVCLNILREDWKPVLTVNSIVYGLQYLFLEPNPEDP 477
YP++PP VK + ++HPN+ G +CL+IL+ W P V +I+ +Q L +PN P
Sbjct: 62 QYPNKPPLVKFVSTMFHPNVYANGELCLDILQNRWSPTYDVAAILTSIQSLLNDPNNASP 121
Query: 478 LNKEAADELQSNRRLFEQHVQRAMRGGY 561
N EAA + N++ + + V++ + +
Sbjct: 122 ANAEAAQLHRENKKEYVRRVRKTVEDSW 149
>SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme
Hus5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 157
Score = 72.9 bits (171), Expect = 3e-14
Identities = 38/117 (32%), Positives = 62/117 (52%), Gaps = 3/117 (2%)
Frame = +1
Query: 211 DLLNFKL-IICPDEGFYRGGRFIFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVCLNI 387
DL+N+K+ I + + GG + + YP PPK + ++HPN+ G VCL+I
Sbjct: 37 DLMNWKVGIPGKPKTSWEGGLYKLTMAFPEEYPTRPPKCRFTPPLFHPNVYPSGTVCLSI 96
Query: 388 LRED--WKPVLTVNSIVYGLQYLFLEPNPEDPLNKEAADELQSNRRLFEQHVQRAMR 552
L E+ WKP +T+ I+ G+Q L +PN P EA + ++ +E+ V+ R
Sbjct: 97 LNEEEGWKPAITIKQILLGIQDLLDDPNIASPAQTEAYTMFKKDKVEYEKRVRAQAR 153
>SPBC1198.09 |ubc16||ubiquitin conjugating enzyme
Ubc16|Schizosaccharomyces pombe|chr 2|||Manual
Length = 160
Score = 66.1 bits (154), Expect = 4e-12
Identities = 34/102 (33%), Positives = 53/102 (51%), Gaps = 2/102 (1%)
Frame = +1
Query: 211 DLLNFKLII-CPDEGFYRGGRFIFSFKVGPNYPHEPPKVKCETAVYHPNID-LEGNVCLN 384
D+ ++K +I P E Y GG+++ V YP PP V +T + HPNI G VC++
Sbjct: 33 DMFHWKAVIEGPTETPYEGGQWVLDIHVHEGYPISPPSVYFQTKIVHPNISWTNGEVCMD 92
Query: 385 ILREDWKPVLTVNSIVYGLQYLFLEPNPEDPLNKEAADELQS 510
IL+ W P ++ S + L + PLN +AA L++
Sbjct: 93 ILKTHWSPAWSLQSACLAIISLLSNYDASSPLNVDAAKLLRT 134
>SPBP16F5.04 |ubc3|ubcp3|ubiquitin conjugating enzyme
Ubc3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 166
Score = 64.9 bits (151), Expect = 8e-12
Identities = 48/160 (30%), Positives = 75/160 (46%), Gaps = 16/160 (10%)
Frame = +1
Query: 121 KASAAQLRITKDLNEL--NLPKTCSTEFSDPDDLLNFKLIIC-PDEGFYRGGRFIFSFKV 291
KA A + R+ K+ EL N P + S+ DD + +I PD + GG + + K
Sbjct: 3 KAMALR-RLMKEYKELTENGPDGITAGPSNEDDFFTWDCLIQGPDGTPFEGGLYPATLKF 61
Query: 292 GPNYPHEPPKVKCETAVYHPNIDLEGNVCLNILR-------------EDWKPVLTVNSIV 432
+YP PP +K E +HPN+ +G VC++IL E W PV +V I+
Sbjct: 62 PSDYPLGPPTLKFECEFFHPNVYKDGTVCISILHAPGDDPNMYESSSERWSPVQSVEKIL 121
Query: 433 YGLQYLFLEPNPEDPLNKEAADELQSNRRLFEQHVQRAMR 552
+ + EPN E N +A + +R + + V+R R
Sbjct: 122 LSVMSMLAEPNDESGANIDACKMWREDREEYCRVVRRLAR 161
>SPBC211.07c |ubc8||ubiquitin conjugating enzyme
Ubc8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 63.3 bits (147), Expect = 3e-11
Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Frame = +1
Query: 241 PDEGFYRGGRFIFSFKVGPNYPHEPPKVKCETAVYHPNID-LEGNVCLNILREDWKPVL- 414
P E Y GG + ++ YP + P + ++HPNID L G+VCL+++ + W P+
Sbjct: 39 PSETPYSGGIWKVHVELPSEYPWKSPSIGFVNRIFHPNIDELSGSVCLDVINQTWSPMFD 98
Query: 415 TVNSIVYGLQYLFLEPNPEDPLNKEAA 495
+N L L PN DPLN EAA
Sbjct: 99 MINIFEVFLPQLLRYPNASDPLNGEAA 125
>SPAC10F6.05c |ubc6||ubiquitin conjugating enzyme
Ubc6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 227
Score = 31.9 bits (69), Expect = 0.071
Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
Frame = +1
Query: 208 DDLLNFKLIIC-PDEGFYRGGRFIFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVCLN 384
+++L + II P + Y GG++ + P+YP +PP ++ T +CL+
Sbjct: 32 ENILEWHYIITGPPDTPYEGGQYHGTLIFPPDYPFKPPAIRMITP--SGRFQTNTRLCLS 89
Query: 385 IL---REDWKPVLTVNSIVYGL 441
+ W P V++I+ GL
Sbjct: 90 FSDFHPKSWNPSWMVSTILVGL 111
>SPBC800.03 |clr3||histone deacetylase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 687
Score = 25.8 bits (54), Expect = 4.7
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = -2
Query: 361 GLCWDDKLLFHISLLEVHE 305
GLC+D ++ FH +L EV +
Sbjct: 58 GLCYDPRMRFHATLSEVDD 76
>SPAC4F10.04 |||protein phosphatase type 2A, intrinsic regulator
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 325
Score = 25.4 bits (53), Expect = 6.2
Identities = 15/50 (30%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
Frame = +1
Query: 172 LPKTCSTEFSDPDDLLNFKLII--CPDEGFYRGGRFIFSFKVGPNYPHEP 315
L S+ PD +LN K++ ++ +FI K GP Y H P
Sbjct: 226 LADKASSSIIKPDAILNKKIVDEKANSNLYFSAIKFINVMKKGPFYEHSP 275
>SPAC6F6.17 |rif1|tap1, tap11, SPAPJ736.01|telomere length regulator
protein Rif1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1400
Score = 25.4 bits (53), Expect = 6.2
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +2
Query: 446 IYFWNQIQKIL*TKKLPMNFKVTVDCLNNTY 538
I FWNQ+ +++ P+ + T+ L+ TY
Sbjct: 997 IKFWNQVFGKFESEEYPIELQKTISYLSKTY 1027
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,065,140
Number of Sequences: 5004
Number of extensions: 40498
Number of successful extensions: 154
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 143
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 146
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 252150250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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