Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0007_I24
(584 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical pr... 100 7e-22
S56051-1|AAB25489.2| 147|Caenorhabditis elegans ubiquitin-conju... 100 7e-22
U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein. 92 2e-19
AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin con... 92 2e-19
Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical pr... 92 3e-19
U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin conju... 88 4e-18
AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin co... 88 4e-18
Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical p... 78 5e-15
AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin co... 75 4e-14
U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin conju... 75 5e-14
AF106565-1|AAC97374.1| 166|Caenorhabditis elegans ubiquitin-con... 75 5e-14
AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical... 65 3e-11
U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin conju... 64 5e-11
AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin co... 64 5e-11
AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical ... 64 7e-11
Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical pr... 61 7e-10
U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin conju... 60 9e-10
AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin con... 53 2e-07
U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2 (c... 45 3e-05
U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin conju... 38 0.004
Z81516-5|CAB04202.1| 219|Caenorhabditis elegans Hypothetical pr... 36 0.028
AL021487-10|CAA16357.2| 1592|Caenorhabditis elegans Hypothetical... 31 0.60
Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical pr... 30 1.4
AJ512486-1|CAD54736.1| 559|Caenorhabditis elegans core alpha-6-... 28 4.2
AF022968-8|AAN84870.1| 559|Caenorhabditis elegans Fucosyl trans... 28 4.2
Z79754-7|CAB02096.2| 387|Caenorhabditis elegans Hypothetical pr... 27 7.4
AF537093-1|AAO85552.1| 387|Caenorhabditis elegans ubiquitin con... 27 7.4
AF273836-1|AAG15184.1| 362|Caenorhabditis elegans nuclear recep... 27 9.8
AC024776-15|AAK68482.2| 354|Caenorhabditis elegans Nuclear horm... 27 9.8
>Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical
protein M7.1 protein.
Length = 147
Score = 100 bits (240), Expect = 7e-22
Identities = 51/133 (38%), Positives = 76/133 (57%), Gaps = 3/133 (2%)
Frame = +1
Query: 142 RITKDLNELNL--PKTCSTEFSDPDDLLNFKLIIC-PDEGFYRGGRFIFSFKVGPNYPHE 312
RI K+L +L P CS DDL +++ I P E Y+GG F + +YP +
Sbjct: 5 RIQKELQDLGRDPPAQCSAG-PVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFK 63
Query: 313 PPKVKCETAVYHPNIDLEGNVCLNILREDWKPVLTVNSIVYGLQYLFLEPNPEDPLNKEA 492
PPKV T +YHPNI+ G++CL+ILR W P LT++ ++ + L +PNP+DPL E
Sbjct: 64 PPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEI 123
Query: 493 ADELQSNRRLFEQ 531
A +++R + Q
Sbjct: 124 ARIYKTDRERYNQ 136
>S56051-1|AAB25489.2| 147|Caenorhabditis elegans
ubiquitin-conjugating enzyme protein.
Length = 147
Score = 100 bits (240), Expect = 7e-22
Identities = 51/133 (38%), Positives = 76/133 (57%), Gaps = 3/133 (2%)
Frame = +1
Query: 142 RITKDLNELNL--PKTCSTEFSDPDDLLNFKLIIC-PDEGFYRGGRFIFSFKVGPNYPHE 312
RI K+L +L P CS DDL +++ I P E Y+GG F + +YP +
Sbjct: 5 RIQKELQDLGRDPPAQCSAG-PVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFK 63
Query: 313 PPKVKCETAVYHPNIDLEGNVCLNILREDWKPVLTVNSIVYGLQYLFLEPNPEDPLNKEA 492
PPKV T +YHPNI+ G++CL+ILR W P LT++ ++ + L +PNP+DPL E
Sbjct: 64 PPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEI 123
Query: 493 ADELQSNRRLFEQ 531
A +++R + Q
Sbjct: 124 ARIYKTDRERYNQ 136
>U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein.
Length = 192
Score = 92.3 bits (219), Expect = 2e-19
Identities = 44/120 (36%), Positives = 70/120 (58%), Gaps = 1/120 (0%)
Frame = +1
Query: 208 DDLLNFKLIIC-PDEGFYRGGRFIFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVCLN 384
D++L ++ II P E + G F S + YP++PP VK + ++HPN+ +G++CL+
Sbjct: 31 DNILTWEAIIFGPQETPFEDGTFKLSLEFTEEYPNKPPTVKFISKMFHPNVYADGSICLD 90
Query: 385 ILREDWKPVLTVNSIVYGLQYLFLEPNPEDPLNKEAADELQSNRRLFEQHVQRAMRGGYV 564
IL+ W P V +I+ +Q L EPNP P N AA Q NRR +E+ VQ+ + ++
Sbjct: 91 ILQNRWSPTYDVAAILTSIQSLLDEPNPNSPANSLAAQLYQENRREYEKRVQQIVEQSWL 150
>AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein1 protein.
Length = 192
Score = 92.3 bits (219), Expect = 2e-19
Identities = 44/120 (36%), Positives = 70/120 (58%), Gaps = 1/120 (0%)
Frame = +1
Query: 208 DDLLNFKLIIC-PDEGFYRGGRFIFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVCLN 384
D++L ++ II P E + G F S + YP++PP VK + ++HPN+ +G++CL+
Sbjct: 31 DNILTWEAIIFGPQETPFEDGTFKLSLEFTEEYPNKPPTVKFISKMFHPNVYADGSICLD 90
Query: 385 ILREDWKPVLTVNSIVYGLQYLFLEPNPEDPLNKEAADELQSNRRLFEQHVQRAMRGGYV 564
IL+ W P V +I+ +Q L EPNP P N AA Q NRR +E+ VQ+ + ++
Sbjct: 91 ILQNRWSPTYDVAAILTSIQSLLDEPNPNSPANSLAAQLYQENRREYEKRVQQIVEQSWL 150
>Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical
protein R09B3.4 protein.
Length = 180
Score = 91.9 bits (218), Expect = 3e-19
Identities = 47/116 (40%), Positives = 67/116 (57%), Gaps = 7/116 (6%)
Frame = +1
Query: 214 LLNFKLIICPDEGFYRGGRFIFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVCLNILR 393
L +L + P EG YRGG+F F V P Y + PP VKC T V+HPNI+ +G++CL+ILR
Sbjct: 58 LHELELTVTPQEGIYRGGKFRFKITVPPEYNNVPPVVKCLTKVWHPNINEDGSICLSILR 117
Query: 394 ED------WKPVLTVNSIVYGLQYLFLE-PNPEDPLNKEAADELQSNRRLFEQHVQ 540
++ W+P + +V+GL LF + + D LN +AA NR F V+
Sbjct: 118 QNSLDQYGWRPTRNLTDVVHGLVSLFNDLMDFNDALNIQAAQMWSQNRESFNHRVR 173
>U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein18 protein.
Length = 153
Score = 88.2 bits (209), Expect = 4e-18
Identities = 47/145 (32%), Positives = 74/145 (51%), Gaps = 7/145 (4%)
Frame = +1
Query: 130 AAQLRITKDLNELNL--PKTCSTEFSDPDDLLNFKLIICPDEGFYRGGRFIFSFKVGPNY 303
+A R+ K+L +L K + +LL + +++ PD+ Y G F +Y
Sbjct: 2 SATRRLQKELGDLKNCGVKAYENVECEETNLLKWTVLLIPDKEPYNKGAFKVGITFPVDY 61
Query: 304 PHEPPKVKCETAVYHPNIDLEGNVCLNIL-REDWKPVLTVNSIVYGLQYLFLEPNPEDPL 480
P +PPKV ET +YHPN+D EG CL I+ E+WKP ++ L L EP P P+
Sbjct: 62 PFKPPKVAFETKIYHPNVDEEGKFCLPIVTAENWKPATKTEQVMMALLSLINEPEPSHPI 121
Query: 481 NKEAADELQSNRRLF----EQHVQR 543
+ A+E Q + + F E+H ++
Sbjct: 122 RADVAEEFQKDHKKFMKTAEEHTRK 146
>AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein13 protein.
Length = 151
Score = 88.2 bits (209), Expect = 4e-18
Identities = 37/95 (38%), Positives = 57/95 (60%)
Frame = +1
Query: 229 LIICPDEGFYRGGRFIFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVCLNILREDWKP 408
+I PD+ + GG F + YP PKV+ T +YHPNID G +CL+IL++ W P
Sbjct: 39 MIAGPDDSPFAGGVFKLELFLPEEYPMAAPKVRFMTKIYHPNIDKLGRICLDILKDKWSP 98
Query: 409 VLTVNSIVYGLQYLFLEPNPEDPLNKEAADELQSN 513
L + +++ +Q L PNPEDPL + A++ ++N
Sbjct: 99 ALQIRTVLLSIQALLSAPNPEDPLATDVAEQWKTN 133
>Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical
protein F58A4.10 protein.
Length = 164
Score = 77.8 bits (183), Expect = 5e-15
Identities = 45/131 (34%), Positives = 70/131 (53%), Gaps = 14/131 (10%)
Frame = +1
Query: 202 DPDDLLNFK-LIICPDEGFYRGGRFIFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVC 378
D +D+ ++ L+I P + Y GG F +YP +PPK+K + ++HPNID EGNVC
Sbjct: 29 DDNDIYKWEVLVIGPPDTLYEGGFFKAILDFPRDYPQKPPKMKFISEIWHPNIDKEGNVC 88
Query: 379 LNIL-------------REDWKPVLTVNSIVYGLQYLFLEPNPEDPLNKEAADELQSNRR 519
++IL E W PV TV +I+ + + +PN E P N +AA + N
Sbjct: 89 ISILHDPGDDKWGYERPEERWLPVHTVETILLSVISMLTDPNFESPANVDAAKMQRENYA 148
Query: 520 LFEQHVQRAMR 552
F++ V + +R
Sbjct: 149 EFKKKVAQCVR 159
>AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein20 protein.
Length = 199
Score = 74.9 bits (176), Expect = 4e-14
Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 1/97 (1%)
Frame = +1
Query: 241 PDEGFYRGGRFIFSFKVGPNYPHEPPKVKCETAVYHPNIDLE-GNVCLNILREDWKPVLT 417
P + Y GG F K+ YP PP VK T ++HPN+ + G +CL+IL++ W LT
Sbjct: 46 PPDTPYAGGMFDLDIKIPDQYPFSPPNVKFSTKIWHPNVSSQTGVICLDILKDQWAASLT 105
Query: 418 VNSIVYGLQYLFLEPNPEDPLNKEAADELQSNRRLFE 528
+ +++ +Q L P P+DP + A + +F+
Sbjct: 106 LRTVLLSIQALMCTPEPKDPQDAVVAKQYMEKPAVFK 142
>U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein9 protein.
Length = 166
Score = 74.5 bits (175), Expect = 5e-14
Identities = 35/98 (35%), Positives = 54/98 (55%), Gaps = 2/98 (2%)
Frame = +1
Query: 256 YRGGRFIFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVCLNILRE--DWKPVLTVNSI 429
+ GG + ++P PPK K E ++HPN+ G VCL++L E DWKP +++ +
Sbjct: 53 WEGGLYRIRMLFKDDFPSTPPKCKFEPPLFHPNVYPSGTVCLSLLDENKDWKPSISIKQL 112
Query: 430 VYGLQYLFLEPNPEDPLNKEAADELQSNRRLFEQHVQR 543
+ G+Q L PN EDP EA NR +E+ V++
Sbjct: 113 LIGIQDLLNHPNIEDPAQAEAYQIYCQNRAEYEKRVKK 150
>AF106565-1|AAC97374.1| 166|Caenorhabditis elegans
ubiquitin-conjugating enzyme 9homolog protein.
Length = 166
Score = 74.5 bits (175), Expect = 5e-14
Identities = 35/98 (35%), Positives = 54/98 (55%), Gaps = 2/98 (2%)
Frame = +1
Query: 256 YRGGRFIFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVCLNILRE--DWKPVLTVNSI 429
+ GG + ++P PPK K E ++HPN+ G VCL++L E DWKP +++ +
Sbjct: 53 WEGGLYRIRMLFKDDFPSTPPKCKFEPPLFHPNVYPSGTVCLSLLDENKDWKPSISIKQL 112
Query: 430 VYGLQYLFLEPNPEDPLNKEAADELQSNRRLFEQHVQR 543
+ G+Q L PN EDP EA NR +E+ V++
Sbjct: 113 LIGIQDLLNHPNIEDPAQAEAYQIYCQNRAEYEKRVKK 150
>AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical
protein Y87G2A.9 protein.
Length = 170
Score = 65.3 bits (152), Expect = 3e-11
Identities = 38/131 (29%), Positives = 61/131 (46%), Gaps = 14/131 (10%)
Frame = +1
Query: 202 DPDDLLNFKLIIC-PDEGFYRGGRFIFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVC 378
D D+ ++ +I P+E + G F +YP PPK++ ++HPNI +G VC
Sbjct: 30 DEDNFFEWECLITGPEETCFANGVFPARITFPQDYPLSPPKMRFTCGIFHPNIYADGRVC 89
Query: 379 LNIL-------------REDWKPVLTVNSIVYGLQYLFLEPNPEDPLNKEAADELQSNRR 519
++IL E W PV ++ I+ + + EPN E P N AA + +R
Sbjct: 90 ISILHAPGDDPTGYELSNERWSPVQSIEKILLSVVSMLAEPNDESPANVSAAKMWREDRA 149
Query: 520 LFEQHVQRAMR 552
FE+ +R
Sbjct: 150 QFEKIADSLVR 160
>U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein21 protein.
Length = 229
Score = 64.5 bits (150), Expect = 5e-11
Identities = 39/123 (31%), Positives = 61/123 (49%), Gaps = 17/123 (13%)
Frame = +1
Query: 208 DDLLNFKLIICPDEGF-YRGGRFIFSFKVGPNYPHEPPKV---------------KCETA 339
++L++ K I EG Y GG F + +YP EPPKV K T
Sbjct: 48 NNLMDIKGFIKGPEGTPYAGGTFEIKVDIPEHYPFEPPKVTEIIFHIRAFEYIQAKFVTR 107
Query: 340 VYHPNIDLE-GNVCLNILREDWKPVLTVNSIVYGLQYLFLEPNPEDPLNKEAADELQSNR 516
++HPNI + G +CL+IL++ W LT+ +++ LQ + P P DP + A + +N
Sbjct: 108 IWHPNISSQTGTICLDILKDKWTASLTLRTVLLSLQAMLCSPEPSDPQDAVVAKQFINNY 167
Query: 517 RLF 525
+F
Sbjct: 168 PMF 170
>AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein3 protein.
Length = 243
Score = 64.5 bits (150), Expect = 5e-11
Identities = 45/144 (31%), Positives = 71/144 (49%), Gaps = 16/144 (11%)
Frame = +1
Query: 112 SQKKASAAQLR-ITKDLNEL-NLPKTCSTEFSDPDDLLNFKL-IICPDEGFYRGGRFIFS 282
S+ S+ LR +T +L L + P T + D+L + + I P + Y+GG F S
Sbjct: 3 SKASTSSGALRALTMELKNLQSQPVEGFTIDVNEDNLFVWTVGIYGPPKTLYQGGYFKAS 62
Query: 283 FKVGPNYPHEPPKVKCETAVYHPNIDLEGNVCLNILR-------------EDWKPVLTVN 423
+ NYP+ PP +K T V+HPN+ G++C++IL E W P +V
Sbjct: 63 IRFPSNYPYSPPSMKFTTKVWHPNVYENGDLCISILHSPIDDPQSGELACERWNPTQSVR 122
Query: 424 SIVYGLQYLFLEPNPEDPLNKEAA 495
+I+ + L EPN P N +A+
Sbjct: 123 TILLSVISLLNEPNTSSPANVDAS 146
>AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical
protein Y54E5B.4 protein.
Length = 152
Score = 64.1 bits (149), Expect = 7e-11
Identities = 39/108 (36%), Positives = 58/108 (53%), Gaps = 6/108 (5%)
Frame = +1
Query: 124 ASAAQLRITKDLNELN--LPKTCSTE-FSDPDDLLNFKLIICPDEG-FYRGGRFIFSFKV 291
+ AA R+ K+L +L P+ + S +DL +K+ + EG Y G F+ F
Sbjct: 2 SDAATRRLMKELAQLKSEAPEGLLVDNTSTSNDLKQWKIGVVGAEGTLYAGEVFMLQFTF 61
Query: 292 GPNYPHEPPKVKC--ETAVYHPNIDLEGNVCLNILREDWKPVLTVNSI 429
GP YP P+V ET HP+I G++CL+IL +DW P L+V S+
Sbjct: 62 GPQYPFNSPEVMFVGETIPAHPHIYSNGHICLSILSDDWTPALSVQSV 109
>Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical
protein F49E12.4 protein.
Length = 160
Score = 60.9 bits (141), Expect = 7e-10
Identities = 35/104 (33%), Positives = 55/104 (52%), Gaps = 2/104 (1%)
Frame = +1
Query: 211 DLLNFKLIICPDEGFYRGGRFIFSFKVGPNYPHEPPKVKCETAVYHPNID-LEGNVCL-N 384
D+ FK+I D Y+ F + V YP +PP +K VYHPN+D + +C
Sbjct: 44 DIFQFKII--GDGVLYKNMIFTLTLDVNVEYPFKPPYLKFCHNVYHPNVDPVTCELCSPM 101
Query: 385 ILREDWKPVLTVNSIVYGLQYLFLEPNPEDPLNKEAADELQSNR 516
+L+E+WKP T+ ++ L L EP+ P+N +AA + N+
Sbjct: 102 LLQENWKPETTMEDVLLNLIVLLNEPDLSRPVNIDAAHDYIHNK 145
>U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein23 protein.
Length = 546
Score = 60.5 bits (140), Expect = 9e-10
Identities = 28/98 (28%), Positives = 54/98 (55%), Gaps = 2/98 (2%)
Frame = +1
Query: 244 DEGFYRGGRFIFSFKVGPNYPHEPPKVKCETAVYHPNID-LEGNVCLNILRED-WKPVLT 417
+E Y GG F K+G +YP + P VK T ++HP++ +G +CL+ + W +T
Sbjct: 389 EETPYEGGIFELDIKIGESYPFKAPTVKFITKIWHPSVSPFDGTICLHDVDNGVWPVSMT 448
Query: 418 VNSIVYGLQYLFLEPNPEDPLNKEAADELQSNRRLFEQ 531
+ ++ +Q N ++P++ E ++ +NR +FE+
Sbjct: 449 IYKVLIVIQSWMSNFNEKEPIDVEILEQATNNREVFEK 486
>AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein8 protein.
Length = 221
Score = 52.8 bits (121), Expect = 2e-07
Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
Frame = +1
Query: 241 PDEGFYRGGRFIFSFKVGPNYPHEPPKVKCETAVYHPNID-LEGNVCLNILREDWKPVLT 417
P + Y G + + YP + P + ++HPNID G VCL+++ + W +
Sbjct: 42 PKDTAYENGVWRIRVDMPDKYPFKSPSIGFLNKIFHPNIDEASGTVCLDVINQAWTALYD 101
Query: 418 VNSIV-YGLQYLFLEPNPEDPLNKEAA 495
+ +I L L PN DPLN EAA
Sbjct: 102 LTNIFDTFLPQLLTYPNAADPLNGEAA 128
>U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2
(conjugating enzyme)variant protein 2 protein.
Length = 230
Score = 45.2 bits (102), Expect = 3e-05
Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Frame = +1
Query: 256 YRGGRFIFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVCLNIL-REDWKPVLTVNSIV 432
+ GG + S +P PP + +T ++HPN+DL G++ L +L +E W ++ ++
Sbjct: 83 WEGGEYEVSVNFH-KWPIIPPICEFKTPLHHPNVDLRGSIYLKMLEQEHWSSETSLKKLL 141
Query: 433 YGLQYLFLEPNPEDPLNKEAADELQSNRRLFE 528
+ L P+ N EA E ++ R +E
Sbjct: 142 REISNLLATPDLTQAANIEAWMEYENQRENYE 173
>U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein17 protein.
Length = 679
Score = 38.3 bits (85), Expect = 0.004
Identities = 25/84 (29%), Positives = 37/84 (44%), Gaps = 12/84 (14%)
Frame = +1
Query: 229 LIICPDEGFYRGGRFIFSFKVGPNYPHEPPKVKCET-----AVYHPNIDLEGNVCLNIL- 390
LI PD+ Y G F F YP PPK T ++PN+ +G +CL+IL
Sbjct: 448 LISGPDDTPYANGLFEFDIFFPTGYPFSPPKCAFLTTGSGNVRFNPNLYNDGKICLSILG 507
Query: 391 ------REDWKPVLTVNSIVYGLQ 444
E W P ++ ++ +Q
Sbjct: 508 TWEGRPEEKWNPYCSLMQVLVSIQ 531
>Z81516-5|CAB04202.1| 219|Caenorhabditis elegans Hypothetical
protein F26H9.7 protein.
Length = 219
Score = 35.5 bits (78), Expect = 0.028
Identities = 25/90 (27%), Positives = 39/90 (43%), Gaps = 3/90 (3%)
Frame = +1
Query: 184 CSTEFSDPDDLLNFKLIICPDEGFYRGGRFIFSFKVGPNYPHEP-PKVKCETAVYHPNID 360
C + LL +I P Y GG F + P H P+V T ++HPN+
Sbjct: 52 CIMRIDETKQLLFHVIIDGPVGSIYEGGTFFADINIQPYQNHSLIPRVCFHTFIFHPNLG 111
Query: 361 LEGNVCLNILREDWKPVLTV--NSIVYGLQ 444
GN + ++ + + L V N IV G++
Sbjct: 112 KYGNWDMRGIQWERRSNLEVLYNFIVEGMR 141
>AL021487-10|CAA16357.2| 1592|Caenorhabditis elegans Hypothetical
protein Y45F10B.10 protein.
Length = 1592
Score = 31.1 bits (67), Expect = 0.60
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +1
Query: 373 VCLNILREDWKPVLTVNSIVYGLQYLFLEPNPEDP 477
VC + +DWKP TV ++ QY+ + N DP
Sbjct: 856 VCRSFTLKDWKPGNTVLTLSANHQYILISGNQSDP 890
>Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical
protein F39B2.2 protein.
Length = 139
Score = 29.9 bits (64), Expect = 1.4
Identities = 15/48 (31%), Positives = 21/48 (43%)
Frame = +1
Query: 232 IICPDEGFYRGGRFIFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNV 375
II P Y + + G NYP EPP V+ T V+ ++ V
Sbjct: 45 IIGPPRTPYESRIYNLQIQCGGNYPREPPTVRFTTKVHMVGVNQSNGV 92
>AJ512486-1|CAD54736.1| 559|Caenorhabditis elegans core
alpha-6-fucosyltransferase protein.
Length = 559
Score = 28.3 bits (60), Expect = 4.2
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = +1
Query: 46 MIKLFSLKQQKKDEEGSARAGGSQKKASAAQLRITKDLNELNLPKTCS 189
MI L L Q + EGS Q+ +A RI K + +L PK CS
Sbjct: 144 MISLMGLSAQLEKLEGSEEERFKQR--TAITQRIFKSIEKLQNPKACS 189
>AF022968-8|AAN84870.1| 559|Caenorhabditis elegans Fucosyl
transferase protein 8 protein.
Length = 559
Score = 28.3 bits (60), Expect = 4.2
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = +1
Query: 46 MIKLFSLKQQKKDEEGSARAGGSQKKASAAQLRITKDLNELNLPKTCS 189
MI L L Q + EGS Q+ +A RI K + +L PK CS
Sbjct: 144 MISLMGLSAQLEKLEGSEEERFKQR--TAITQRIFKSIEKLQNPKACS 189
>Z79754-7|CAB02096.2| 387|Caenorhabditis elegans Hypothetical
protein F25H2.8 protein.
Length = 387
Score = 27.5 bits (58), Expect = 7.4
Identities = 13/55 (23%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +1
Query: 274 IFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGN-VCLNIL-REDWKPVLTVNSIV 432
+FSF +P +PP V+ + L G +C+ +L ++ W ++ S +
Sbjct: 280 LFSFTFNEKFPCDPPFVRVVAPHINQGFVLGGGAICMELLTKQGWSSAYSIESCI 334
>AF537093-1|AAO85552.1| 387|Caenorhabditis elegans ubiquitin
conjugating enzyme UBC-25 protein.
Length = 387
Score = 27.5 bits (58), Expect = 7.4
Identities = 13/55 (23%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +1
Query: 274 IFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGN-VCLNIL-REDWKPVLTVNSIV 432
+FSF +P +PP V+ + L G +C+ +L ++ W ++ S +
Sbjct: 280 LFSFTFNEKFPCDPPFVRVVAPHINQGFVLGGGAICMELLTKQGWSSAYSIESCI 334
>AF273836-1|AAG15184.1| 362|Caenorhabditis elegans nuclear receptor
NHR-92 protein.
Length = 362
Score = 27.1 bits (57), Expect = 9.8
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +2
Query: 482 TKKLPMNFKVTVDCLNNTYRERCEAVTSAQTT 577
TK L FK+ D +NN++RE E +TT
Sbjct: 148 TKVLLKEFKLVKDWINNSFREFSELPDDQKTT 179
>AC024776-15|AAK68482.2| 354|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 92 protein.
Length = 354
Score = 27.1 bits (57), Expect = 9.8
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +2
Query: 482 TKKLPMNFKVTVDCLNNTYRERCEAVTSAQTT 577
TK L FK+ D +NN++RE E +TT
Sbjct: 140 TKVLLKEFKLVKDWINNSFREFSELPDDQKTT 171
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,541,421
Number of Sequences: 27780
Number of extensions: 227448
Number of successful extensions: 672
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 644
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 660
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1226509528
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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