Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0007_I23
         (625 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U77700-1|AAC51648.1| 1928|Homo sapiens HsGCN1 protein.                 30   5.8  
D86973-1|BAA13209.2| 2675|Homo sapiens KIAA0219 protein.               30   5.8  
AC004812-3|AAC83183.1| 2392|Homo sapiens WUGSC:H_267D11.3 protein.     30   5.8  

>U77700-1|AAC51648.1| 1928|Homo sapiens HsGCN1 protein.
          Length = 1928

 Score = 30.3 bits (65), Expect = 5.8
 Identities = 19/57 (33%), Positives = 28/57 (49%)
 Frame = +2

Query: 233 AYVWAELLVQATENNQRYQPVLDRVAAQIWDSPADVYEIPVGLPLAVFPKNKFLQEA 403
           A V   L+    E   R  PVLD +   I +SP D +E   GL LA+   +++L  +
Sbjct: 354 AEVMGRLMEIYQEKLYRPPPVLDALGRVISESPPDQWEARCGLALALNKLSQYLDSS 410


>D86973-1|BAA13209.2| 2675|Homo sapiens KIAA0219 protein.
          Length = 2675

 Score = 30.3 bits (65), Expect = 5.8
 Identities = 19/57 (33%), Positives = 28/57 (49%)
 Frame = +2

Query: 233  AYVWAELLVQATENNQRYQPVLDRVAAQIWDSPADVYEIPVGLPLAVFPKNKFLQEA 403
            A V   L+    E   R  PVLD +   I +SP D +E   GL LA+   +++L  +
Sbjct: 1199 AEVMGRLMEIYQEKLYRPPPVLDALGRVISESPPDQWEARCGLALALNKLSQYLDSS 1255


>AC004812-3|AAC83183.1| 2392|Homo sapiens WUGSC:H_267D11.3 protein.
          Length = 2392

 Score = 30.3 bits (65), Expect = 5.8
 Identities = 19/57 (33%), Positives = 28/57 (49%)
 Frame = +2

Query: 233  AYVWAELLVQATENNQRYQPVLDRVAAQIWDSPADVYEIPVGLPLAVFPKNKFLQEA 403
            A V   L+    E   R  PVLD +   I +SP D +E   GL LA+   +++L  +
Sbjct: 916  AEVMGRLMEIYQEKLYRPPPVLDALGRVISESPPDQWEARCGLALALNKLSQYLDSS 972


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,064,258
Number of Sequences: 237096
Number of extensions: 2410890
Number of successful extensions: 9002
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8648
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8998
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6747805200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)