Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0007_I23
         (625 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U29612-3|AAA68802.2|  289|Caenorhabditis elegans Hypothetical pr...    40   0.002
AF098993-5|AAC67468.1|  325|Caenorhabditis elegans Hypothetical ...    34   0.072
U67952-2|AAB07576.1|  139|Caenorhabditis elegans Hypothetical pr...    31   0.67 
Z74031-8|CAA98451.1|  372|Caenorhabditis elegans Hypothetical pr...    29   2.7  
AL021493-2|CAA16393.1|  382|Caenorhabditis elegans Hypothetical ...    29   3.6  

>U29612-3|AAA68802.2|  289|Caenorhabditis elegans Hypothetical
           protein C09B8.4 protein.
          Length = 289

 Score = 39.5 bits (88), Expect = 0.002
 Identities = 29/112 (25%), Positives = 52/112 (46%)
 Frame = +2

Query: 5   KPLCIIMNWMLAKSNHVMKYANIYLEQDYDVVNVSCSPLQLMWPLKGSQVIAAELMNFLE 184
           KP+ +++ W  A + H+ KY+ +Y ++ YDV  + C P         S  I   ++  LE
Sbjct: 54  KPVVLMIGWAGAANKHMEKYSKLYNDKGYDVALI-CPPTFSFTVPNNS--IGKRMLPILE 110

Query: 185 SNKDFAHYVVHGFSVGAYVWAELLVQATENNQRYQPVLDRVAAQIWDSPADV 340
              + +  ++H FS+        L +AT N +    + D V   I+DS   +
Sbjct: 111 KYGN-SPIMIHSFSINGIRGIVSLAKATGNPK----LFDNVQGIIFDSAPSI 157


>AF098993-5|AAC67468.1|  325|Caenorhabditis elegans Hypothetical
           protein T10B11.6 protein.
          Length = 325

 Score = 34.3 bits (75), Expect = 0.072
 Identities = 29/116 (25%), Positives = 56/116 (48%), Gaps = 8/116 (6%)
 Frame = +2

Query: 5   KPLCIIMNWMLAKSNHVMKYANIYLEQDYDVVNVSCSPLQLMWPLKGSQV--IAAELMNF 178
           KP+ +++ W  A   H+ KY  +Y ++ Y VV++ C P    + +  S+V    + L   
Sbjct: 68  KPVILMVGWAGANPKHIDKYIKVYNDEGYRVVSL-CPPC-YHYSIPNSRVGFYMSPLFRA 125

Query: 179 LESNK-DFAHY-----VVHGFSVGAYVWAELLVQATENNQRYQPVLDRVAAQIWDS 328
           +++   DF  +     +VH FS+          + TE  ++ Q + +R+   I+DS
Sbjct: 126 IDAKPGDFRSFAKCPIIVHSFSMNGVRGLISFWKWTEAEEKPQ-LRERIKGIIFDS 180


>U67952-2|AAB07576.1|  139|Caenorhabditis elegans Hypothetical
           protein F39B3.3 protein.
          Length = 139

 Score = 31.1 bits (67), Expect = 0.67
 Identities = 20/49 (40%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
 Frame = +1

Query: 229 RSLRMGRVVGASHGKQPKVSTSAG-PRGRTNMGLPS*CLRNTSRFTSSG 372
           RS R+ RV          +STS G PRG T+  L     RN +R+T+SG
Sbjct: 72  RSSRIRRVPDRYGSSVEHLSTSTGTPRGSTSTQLGQASTRNGNRYTASG 120


>Z74031-8|CAA98451.1|  372|Caenorhabditis elegans Hypothetical
           protein F32D8.8 protein.
          Length = 372

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = -3

Query: 398 PAGIYFLGTPLEVNRLVFRRHQLGSPI 318
           P G+ FLG P  ++ ++F  H++  PI
Sbjct: 299 PGGLLFLGLPFGLDAVIFNTHRVYGPI 325


>AL021493-2|CAA16393.1|  382|Caenorhabditis elegans Hypothetical
           protein Y51A2B.2 protein.
          Length = 382

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = -3

Query: 443 CETVSYAILCMILKLPAGIYFLGTPLEVNRLVF 345
           CETV Y  + + +  PAG+  + T L++   +F
Sbjct: 237 CETVGYGNIIISMATPAGVQLMETVLQIGIPIF 269


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,357,243
Number of Sequences: 27780
Number of extensions: 380521
Number of successful extensions: 1018
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 982
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1018
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1363963182
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)