Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0007_I23
         (625 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic ac...    22   4.2  
DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholi...    22   5.6  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    21   7.4  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    21   7.4  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    21   7.4  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    21   7.4  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   9.8  

>AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha-3 protein.
          Length = 537

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 6/10 (60%), Positives = 10/10 (100%)
 Frame = -2

Query: 285 YLWLFSVACT 256
           +LW+F++ACT
Sbjct: 485 FLWVFTLACT 494


>DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholine
           receptor alpha1subunit protein.
          Length = 601

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 6/9 (66%), Positives = 9/9 (100%)
 Frame = -2

Query: 285 YLWLFSVAC 259
           +LW+F+VAC
Sbjct: 550 FLWIFTVAC 558


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = -2

Query: 69  LAYFITWFDFAN 34
           + YFITW  + N
Sbjct: 362 MVYFITWLGYVN 373


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = -2

Query: 69  LAYFITWFDFAN 34
           + YFITW  + N
Sbjct: 362 MVYFITWLGYVN 373


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = -2

Query: 69  LAYFITWFDFAN 34
           + YFITW  + N
Sbjct: 362 MVYFITWLGYVN 373


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +1

Query: 568 TRHVGRDGHQVQLEM 612
           TR+ GR  H + LEM
Sbjct: 367 TRYPGRADHMIMLEM 381


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 7/27 (25%), Positives = 14/27 (51%)
 Frame = -1

Query: 343 VDISWGVPYLCGHAVQHWLIPLVVFRG 263
           V +SW  PY     ++ ++I   + +G
Sbjct: 892 VQLSWAAPYDGNSPIKRYVIEYKISKG 918


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,218
Number of Sequences: 438
Number of extensions: 4572
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18582456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)