Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0007_I13
         (720 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF003384-12|AAB54236.2|  331|Caenorhabditis elegans Trypsin-like...    36   0.038
U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like p...    33   0.16 
Z78013-9|CAB01420.2|  297|Caenorhabditis elegans Hypothetical pr...    30   1.9  
Z69717-1|CAA93531.1| 1391|Caenorhabditis elegans Hypothetical pr...    29   4.4  
U97408-1|AAB93344.2|  360|Caenorhabditis elegans Trypsin-like pr...    28   7.7  

>AF003384-12|AAB54236.2|  331|Caenorhabditis elegans Trypsin-like
           protease protein 5 protein.
          Length = 331

 Score = 35.5 bits (78), Expect = 0.038
 Identities = 13/20 (65%), Positives = 19/20 (95%)
 Frame = +2

Query: 635 KLLCGGSLISSKYVLTAAHC 694
           +++CGG+LI+ K+VLTAAHC
Sbjct: 59  EVICGGTLITLKHVLTAAHC 78


>U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like
           protease protein 1 protein.
          Length = 293

 Score = 33.5 bits (73), Expect = 0.16
 Identities = 13/17 (76%), Positives = 14/17 (82%)
 Frame = +2

Query: 644 CGGSLISSKYVLTAAHC 694
           CGGSLI   +VLTAAHC
Sbjct: 84  CGGSLIDPNFVLTAAHC 100


>Z78013-9|CAB01420.2|  297|Caenorhabditis elegans Hypothetical
           protein F15B9.5 protein.
          Length = 297

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 11/19 (57%), Positives = 15/19 (78%)
 Frame = +2

Query: 641 LCGGSLISSKYVLTAAHCV 697
           +CGG LI+   V+T+AHCV
Sbjct: 45  VCGGVLIAPSIVITSAHCV 63


>Z69717-1|CAA93531.1| 1391|Caenorhabditis elegans Hypothetical
           protein E01G6.1 protein.
          Length = 1391

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 25/93 (26%), Positives = 38/93 (40%), Gaps = 3/93 (3%)
 Frame = +3

Query: 153 CEPLLNLFRNKSRTAEDKKLLGDSQC--GYENNIPMVCCPIS-NACKTPDDKPGICVGLY 323
           C+ L+ L   K+  +E ++   +  C  GYE N    CCP S NAC     +   C G  
Sbjct: 424 CDGLVPL---KNPNSELQRCSEEDPCPAGYECNDSSYCCPSSENACNANMSRGNGCKG-- 478

Query: 324 NCEHITYMMLDKTRKSKMDYVRQSVCNGPETFS 422
                +    DK++K    +V       P  F+
Sbjct: 479 -STQRSMWFYDKSKKKCSQFVYNGCGGTPNRFT 510


>U97408-1|AAB93344.2|  360|Caenorhabditis elegans Trypsin-like
           protease protein 6 protein.
          Length = 360

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = +2

Query: 644 CGGSLISSKYVLTAAHC 694
           C G+L S +++LTA HC
Sbjct: 75  CSGTLTSPRHILTATHC 91


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,009,977
Number of Sequences: 27780
Number of extensions: 369917
Number of successful extensions: 988
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 951
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 987
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1687292480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)