Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0007_I13
         (720 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    36   3e-04
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    24   1.7  
AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    23   2.9  
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    22   5.1  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    22   5.1  
AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic ac...    22   6.7  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    22   6.7  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                22   6.7  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 36.3 bits (80), Expect = 3e-04
 Identities = 12/20 (60%), Positives = 18/20 (90%)
 Frame = +2

Query: 638 LLCGGSLISSKYVLTAAHCV 697
           ++CG ++IS +YVLTAAHC+
Sbjct: 186 MICGATIISKRYVLTAAHCI 205



 Score = 24.6 bits (51), Expect = 0.95
 Identities = 12/35 (34%), Positives = 22/35 (62%)
 Frame = +3

Query: 510 ESNNECCGVEDTVVNKIVGGNDTKITQYPWLVVIE 614
           +S N  CG ++   ++IVGG +T I ++P +  I+
Sbjct: 147 DSTNCNCGWKNP--SRIVGGTNTGINEFPMMAGIK 179


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +3

Query: 267 ISNACKTPDDKP 302
           ++NACK  DDKP
Sbjct: 392 LTNACKKKDDKP 403


>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = -1

Query: 303 PVYRLESYKRLKW 265
           P YRLE  KRL W
Sbjct: 333 PKYRLELQKRLPW 345


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +1

Query: 355 IRPERVKWITFDNPF 399
           I PER ++I F  PF
Sbjct: 525 INPERAEFIEFSKPF 539


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
            protein.
          Length = 1143

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 14/49 (28%), Positives = 20/49 (40%)
 Frame = -3

Query: 571  FPPTILLTTVSSTPQHSLLLSSGKAVTALEHLSLRVISSGFISGGGPQH 425
            F P +LL      P+   + SS        HL++ V+      G GP H
Sbjct: 883  FAPLLLLHLTPLQPRFYSISSSPDVHQGQIHLTVAVVQYKTQDGFGPIH 931


>AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic
           acetylcholine receptorApisa2 subunit protein.
          Length = 541

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -1

Query: 249 VYYSHNHIVSLLKVSYPQLFCFY 181
           ++Y+ N IV  + +SY  +  FY
Sbjct: 236 LFYTVNLIVPCVSISYLSVLAFY 258


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = -1

Query: 246 YYSHNHIVSLLKVSYPQLFCF 184
           YYS+  +++L+  S P   C+
Sbjct: 640 YYSYIGVLTLVATSMPTYICY 660


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 11/42 (26%), Positives = 17/42 (40%)
 Frame = +3

Query: 330 EHITYMMLDKTRKSKMDYVRQSVCNGPETFSVCCGPPPEINP 455
           +H+ Y       +S   YV     +G + F+  C P P   P
Sbjct: 362 QHLHYRQPPTLSESYSSYVNSMYASGAQ-FATPCTPSPPRGP 402


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 205,876
Number of Sequences: 438
Number of extensions: 4754
Number of successful extensions: 14
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22292145
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)