Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0007_I12
         (707 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    27   0.23 
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    23   2.8  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    23   2.8  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    22   6.6  

>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 26.6 bits (56), Expect = 0.23
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -3

Query: 168 CSPGCLRQ*CLLDYLHRQLELH 103
           C    + + CL +YL++QLELH
Sbjct: 317 CHAEVVARRCLCEYLYKQLELH 338


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = +1

Query: 331 FVNTMTLSANVLCLNVPLKTSRNLSCDLRNLYLP 432
           + N+ T +    CL V L   R  S  L  +Y+P
Sbjct: 218 YCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIP 251


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = +1

Query: 331 FVNTMTLSANVLCLNVPLKTSRNLSCDLRNLYLP 432
           + N+ T +    CL V L   R  S  L  +Y+P
Sbjct: 218 YCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIP 251


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 9/38 (23%), Positives = 18/38 (47%)
 Frame = +3

Query: 141 IIDGDNQVNIVDGPSGPTPRDGSLLK*NGITALEKALF 254
           ++ G +Q +    P GPTP   + ++   I  + +  F
Sbjct: 372 LLSGRSQKSTTGPPPGPTPAQKARMRALNIDRVSRVFF 409


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,514
Number of Sequences: 438
Number of extensions: 3776
Number of successful extensions: 12
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21804885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)