Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0007_I05
(651 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41009-3|AAO44916.1| 353|Caenorhabditis elegans Hypothetical pr... 95 4e-20
U41009-2|AAA82279.1| 404|Caenorhabditis elegans Hypothetical pr... 95 4e-20
U41009-4|AAA82280.1| 404|Caenorhabditis elegans Hypothetical pr... 92 4e-19
AL110479-11|CAB54357.1| 363|Caenorhabditis elegans Hypothetical... 92 4e-19
AL110479-10|CAD56249.1| 345|Caenorhabditis elegans Hypothetical... 92 4e-19
Z81485-1|CAB03975.1| 403|Caenorhabditis elegans Hypothetical pr... 91 5e-19
U56963-10|AAM97949.1| 353|Caenorhabditis elegans Temporarily as... 86 2e-17
U56963-9|AAB38126.2| 404|Caenorhabditis elegans Temporarily ass... 86 2e-17
Z81506-10|CAB04123.2| 270|Caenorhabditis elegans Hypothetical p... 28 6.6
Z81115-1|CAB03291.1| 365|Caenorhabditis elegans Hypothetical pr... 28 6.6
D83738-1|BAA12091.1| 366|Caenorhabditis elegans aldolase Ce1 pr... 28 6.6
AL023836-2|CAC42371.1| 270|Caenorhabditis elegans Hypothetical ... 28 6.6
>U41009-3|AAO44916.1| 353|Caenorhabditis elegans Hypothetical
protein C06E7.3b protein.
Length = 353
Score = 95.1 bits (226), Expect = 4e-20
Identities = 40/70 (57%), Positives = 53/70 (75%)
Frame = +1
Query: 1 VAEPLSITVFDYGTSHKTQQQLLSIVKKNFDLRPGKIVKELNLRAPIYQKTSTYGHFGRE 180
VA+PLS+ VF +GTS +++ LL+IV NFDLRPGKI+K L+L+ PIY+ T+ GHFG
Sbjct: 261 VAKPLSVMVFSFGTSALSEEDLLTIVNDNFDLRPGKIIKNLDLKRPIYEPTAENGHFGHN 320
Query: 181 GFPWESPKPL 210
FPWE P+ L
Sbjct: 321 NFPWEQPRNL 330
>U41009-2|AAA82279.1| 404|Caenorhabditis elegans Hypothetical
protein C06E7.3a protein.
Length = 404
Score = 95.1 bits (226), Expect = 4e-20
Identities = 40/70 (57%), Positives = 53/70 (75%)
Frame = +1
Query: 1 VAEPLSITVFDYGTSHKTQQQLLSIVKKNFDLRPGKIVKELNLRAPIYQKTSTYGHFGRE 180
VA+PLS+ VF +GTS +++ LL+IV NFDLRPGKI+K L+L+ PIY+ T+ GHFG
Sbjct: 312 VAKPLSVMVFSFGTSALSEEDLLTIVNDNFDLRPGKIIKNLDLKRPIYEPTAENGHFGHN 371
Query: 181 GFPWESPKPL 210
FPWE P+ L
Sbjct: 372 NFPWEQPRNL 381
>U41009-4|AAA82280.1| 404|Caenorhabditis elegans Hypothetical
protein C06E7.1a protein.
Length = 404
Score = 91.9 bits (218), Expect = 4e-19
Identities = 39/73 (53%), Positives = 53/73 (72%)
Frame = +1
Query: 1 VAEPLSITVFDYGTSHKTQQQLLSIVKKNFDLRPGKIVKELNLRAPIYQKTSTYGHFGRE 180
VA+PLS+ VF +GTS + +LL IV NFDLRPG I+K+L+L+ PIY+ T+ GHFG
Sbjct: 312 VAKPLSVMVFSFGTSALNEGELLKIVNDNFDLRPGMIIKDLDLKKPIYEPTAENGHFGHN 371
Query: 181 GFPWESPKPLIVE 219
FPWE P+ L ++
Sbjct: 372 EFPWEQPRHLQID 384
>AL110479-11|CAB54357.1| 363|Caenorhabditis elegans Hypothetical
protein Y105C5B.12b protein.
Length = 363
Score = 91.9 bits (218), Expect = 4e-19
Identities = 39/73 (53%), Positives = 53/73 (72%)
Frame = +1
Query: 1 VAEPLSITVFDYGTSHKTQQQLLSIVKKNFDLRPGKIVKELNLRAPIYQKTSTYGHFGRE 180
VA+PLS+ VF +GTS + +LL IV NFDLRPG I+K+L+L+ PIY+ T+ GHFG
Sbjct: 271 VAKPLSVMVFSFGTSALNEGELLKIVNDNFDLRPGMIIKDLDLKKPIYEPTAENGHFGHN 330
Query: 181 GFPWESPKPLIVE 219
FPWE P+ L ++
Sbjct: 331 EFPWEQPRHLQID 343
>AL110479-10|CAD56249.1| 345|Caenorhabditis elegans Hypothetical
protein Y105C5B.12a protein.
Length = 345
Score = 91.9 bits (218), Expect = 4e-19
Identities = 39/73 (53%), Positives = 53/73 (72%)
Frame = +1
Query: 1 VAEPLSITVFDYGTSHKTQQQLLSIVKKNFDLRPGKIVKELNLRAPIYQKTSTYGHFGRE 180
VA+PLS+ VF +GTS + +LL IV NFDLRPG I+K+L+L+ PIY+ T+ GHFG
Sbjct: 253 VAKPLSVMVFSFGTSALNEGELLKIVNDNFDLRPGMIIKDLDLKKPIYEPTAENGHFGHN 312
Query: 181 GFPWESPKPLIVE 219
FPWE P+ L ++
Sbjct: 313 EFPWEQPRHLQID 325
>Z81485-1|CAB03975.1| 403|Caenorhabditis elegans Hypothetical
protein C49F5.1 protein.
Length = 403
Score = 91.5 bits (217), Expect = 5e-19
Identities = 38/70 (54%), Positives = 53/70 (75%)
Frame = +1
Query: 1 VAEPLSITVFDYGTSHKTQQQLLSIVKKNFDLRPGKIVKELNLRAPIYQKTSTYGHFGRE 180
+A+P+S+ V+ +GTS T ++L IV+ +FDL PGKI+KEL+L+ PIY+KT+ GHFG
Sbjct: 311 IAKPISVLVYAFGTSPLTDEELHQIVEDSFDLTPGKIIKELDLKRPIYEKTAENGHFGHS 370
Query: 181 GFPWESPKPL 210
FPWE PK L
Sbjct: 371 EFPWEQPKAL 380
>U56963-10|AAM97949.1| 353|Caenorhabditis elegans Temporarily
assigned gene nameprotein 32, isoform b protein.
Length = 353
Score = 85.8 bits (203), Expect = 2e-17
Identities = 37/73 (50%), Positives = 50/73 (68%)
Frame = +1
Query: 1 VAEPLSITVFDYGTSHKTQQQLLSIVKKNFDLRPGKIVKELNLRAPIYQKTSTYGHFGRE 180
VA+PLS+ VF +GTS + +LL IV NFDLRPG I+K L+L+ IY+ T+ GHFG
Sbjct: 261 VAKPLSVMVFSFGTSALNEAELLKIVNDNFDLRPGMIIKNLDLKRAIYEPTAENGHFGHN 320
Query: 181 GFPWESPKPLIVE 219
FPWE + L ++
Sbjct: 321 DFPWEQARKLKID 333
>U56963-9|AAB38126.2| 404|Caenorhabditis elegans Temporarily
assigned gene nameprotein 32, isoform a protein.
Length = 404
Score = 85.8 bits (203), Expect = 2e-17
Identities = 37/73 (50%), Positives = 50/73 (68%)
Frame = +1
Query: 1 VAEPLSITVFDYGTSHKTQQQLLSIVKKNFDLRPGKIVKELNLRAPIYQKTSTYGHFGRE 180
VA+PLS+ VF +GTS + +LL IV NFDLRPG I+K L+L+ IY+ T+ GHFG
Sbjct: 312 VAKPLSVMVFSFGTSALNEAELLKIVNDNFDLRPGMIIKNLDLKRAIYEPTAENGHFGHN 371
Query: 181 GFPWESPKPLIVE 219
FPWE + L ++
Sbjct: 372 DFPWEQARKLKID 384
>Z81506-10|CAB04123.2| 270|Caenorhabditis elegans Hypothetical
protein F16H6.10 protein.
Length = 270
Score = 27.9 bits (59), Expect = 6.6
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +1
Query: 1 VAEPLSITVFDYGTSHKTQQQLLSIVKKNFDLRPGKIV 114
V LSIT+ + + +KT L +K+ DLRP ++
Sbjct: 87 VLSHLSITISEESSLNKTDVTFLKHLKRILDLRPSSLI 124
>Z81115-1|CAB03291.1| 365|Caenorhabditis elegans Hypothetical
protein T05D4.1 protein.
Length = 365
Score = 27.9 bits (59), Expect = 6.6
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = -1
Query: 426 NAAVT*GRGFLTAVPQFHSRGSLDTNINSSKETNARDNLASFLQ 295
NA VT G+G L A S GS+D +NS N +N + Q
Sbjct: 21 NAIVTPGKGILAAD---ESTGSMDKRLNSIGLENTEENRRKYRQ 61
>D83738-1|BAA12091.1| 366|Caenorhabditis elegans aldolase Ce1
protein.
Length = 366
Score = 27.9 bits (59), Expect = 6.6
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = -1
Query: 426 NAAVT*GRGFLTAVPQFHSRGSLDTNINSSKETNARDNLASFLQ 295
NA VT G+G L A S GS+D +NS N +N + Q
Sbjct: 21 NAIVTPGKGILAAD---ESTGSMDKRLNSIGLENTEENRRKYRQ 61
>AL023836-2|CAC42371.1| 270|Caenorhabditis elegans Hypothetical
protein F16H6.10 protein.
Length = 270
Score = 27.9 bits (59), Expect = 6.6
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +1
Query: 1 VAEPLSITVFDYGTSHKTQQQLLSIVKKNFDLRPGKIV 114
V LSIT+ + + +KT L +K+ DLRP ++
Sbjct: 87 VLSHLSITISEESSLNKTDVTFLKHLKRILDLRPSSLI 124
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,986,686
Number of Sequences: 27780
Number of extensions: 317904
Number of successful extensions: 698
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 675
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 698
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -