Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0007_H20
         (550 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholi...    22   4.7  
L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.          21   6.2  
AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier...    21   8.2  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    21   8.2  
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      21   8.2  

>DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholine
           receptor alpha1subunit protein.
          Length = 601

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -1

Query: 478 IAEHAATSLRFPSVVERW 425
           IA+HA    +F SV E W
Sbjct: 522 IAQHAKNKDKFESVEEDW 539


>L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.
          Length = 150

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +2

Query: 86  KKLSNDRFMTRCGTTDEKY 142
           K+  ND F+ R  T DEK+
Sbjct: 17  KRSENDPFLKRLITGDEKW 35


>AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier
           protein JHBP-1 protein.
          Length = 253

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 8/23 (34%), Positives = 16/23 (69%)
 Frame = -1

Query: 115 GHKSVIREFLITNIMVSFIAVHI 47
           G  ++IR F++T +++  IAV +
Sbjct: 2   GRITIIRFFVLTTMLMMAIAVEL 24


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +2

Query: 86  KKLSNDRFMTRCGTTDEKY 142
           K+  ND F+ R  T DEK+
Sbjct: 138 KRNENDPFLKRLITGDEKW 156


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -1

Query: 175 LVTPVCPYIHFVFFICCSTSGHKSV 101
           L + VC   H VF    S + HKS+
Sbjct: 399 LNSAVCALCHKVFRTLNSLNNHKSI 423


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,712
Number of Sequences: 438
Number of extensions: 3726
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15704448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)