Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0007_H16
(397 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC21C3.08c |||ornithine aminotransferase|Schizosaccharomyces p... 58 7e-10
SPAC27F1.05c |||aminotransferase class-III, unknown specificty|S... 57 9e-10
SPAC1039.07c |||4-aminobutyrate aminotransferase |Schizosaccharo... 52 4e-08
SPBC1773.03c |||aminotransferase class-III, unknown specificty|S... 42 3e-05
SPCC777.09c |arg1||acetylornithine aminotransferase|Schizosaccha... 37 0.001
SPAC19D5.07 |uga1||4-aminobutyrate aminotransferase |Schizosacch... 37 0.001
SPCC417.11c |||glutamate-1-semialdehyde 2,1-aminomutaseaminotran... 35 0.004
SPCC1902.02 |mug72|SPCC663.16c|ketopantoate reductase |Schizosac... 28 0.60
SPAC24C9.15c |spn5|mde9, meu28|septin Spn5|Schizosaccharomyces p... 28 0.60
SPAC13C5.07 |rad32|mre11|Rad32 nuclease|Schizosaccharomyces pomb... 27 1.1
SPAC24C9.07c |bgs2|meu21, pgs2|1,3-beta-glucan synthase subunit ... 26 2.4
SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|... 26 2.4
SPCC290.02 |rpc34||DNA-directed RNA polymerase III complex subun... 26 2.4
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 26 2.4
SPAC1751.01c |gti1||gluconate transporter inducer Gti1|Schizosac... 25 3.2
SPCC1672.11c |||P-type ATPase |Schizosaccharomyces pombe|chr 3||... 25 3.2
SPBC1A4.05 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 25 3.2
SPAC25B8.06c |||serine-tRNA ligase|Schizosaccharomyces pombe|chr... 25 5.6
SPAC1639.02c |trk2|SPAC1F5.12|potassium ion transporter Trk2|Sch... 25 5.6
SPAC3G6.01 |hrp3||ATP-dependent DNA helicase Hrp3|Schizosaccharo... 24 7.4
SPCC74.02c |||mRNA cleavage and polyadenylation specificity fact... 24 9.8
SPCC970.03 |||cytochrome b5 reductase |Schizosaccharomyces pombe... 24 9.8
SPBC30D10.08 |mgm101||mitochondrial nucleoid protein|Schizosacch... 24 9.8
>SPBC21C3.08c |||ornithine aminotransferase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 438
Score = 57.6 bits (133), Expect = 7e-10
Identities = 27/51 (52%), Positives = 34/51 (66%)
Frame = +1
Query: 223 KIAAFFAESIQGAGGTIQFPKGYLKKAYDLVKKNGGLYVADEVQTGFGRTG 375
K+AAF E IQG G + GYL++AY L K + L++ADEVQTG RTG
Sbjct: 206 KVAAFLVEPIQGEAGVMVPDDGYLEEAYKLCKAHNVLFIADEVQTGVARTG 256
>SPAC27F1.05c |||aminotransferase class-III, unknown
specificty|Schizosaccharomyces pombe|chr 1|||Manual
Length = 484
Score = 57.2 bits (132), Expect = 9e-10
Identities = 31/68 (45%), Positives = 38/68 (55%)
Frame = +1
Query: 193 ELLGNSVPAGKIAAFFAESIQGAGGTIQFPKGYLKKAYDLVKKNGGLYVADEVQTGFGRT 372
E L ++ +G +F E IQG GG I P GYL KA +L K V DE+QTG GRT
Sbjct: 226 EALQVALSSGMYRSFIVEPIQGEGGVIVPPPGYLAKARELCTKYDTYLVLDEIQTGCGRT 285
Query: 373 GDGYWGFE 396
G +W E
Sbjct: 286 GK-FWACE 292
>SPAC1039.07c |||4-aminobutyrate aminotransferase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 448
Score = 51.6 bits (118), Expect = 4e-08
Identities = 23/52 (44%), Positives = 30/52 (57%)
Frame = +1
Query: 220 GKIAAFFAESIQGAGGTIQFPKGYLKKAYDLVKKNGGLYVADEVQTGFGRTG 375
G +A E+I GG I+ P+GYLK ++ G L + DE QTG GRTG
Sbjct: 210 GSLACMIVETILSTGGIIELPQGYLKALKKKCEERGMLLIIDEAQTGIGRTG 261
>SPBC1773.03c |||aminotransferase class-III, unknown
specificty|Schizosaccharomyces pombe|chr 2|||Manual
Length = 459
Score = 42.3 bits (95), Expect = 3e-05
Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Frame = +1
Query: 163 TSDKYAHQLHELLGNS---VPAGKIAAFFAESIQGAGGTIQFP-KGYLKKAYDLVKKNGG 330
T+++Y +L + L + V K+AAF AE++ GA P GY K + K G
Sbjct: 192 TTEEYVARLAKELEDEILRVGPEKVAAFVAETVSGACTGCATPVPGYFKAMRKVCDKYGV 251
Query: 331 LYVADEVQTGFGRTG 375
++ DEV +G GRTG
Sbjct: 252 IFYLDEVMSGIGRTG 266
>SPCC777.09c |arg1||acetylornithine
aminotransferase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 441
Score = 36.7 bits (81), Expect = 0.001
Identities = 19/52 (36%), Positives = 24/52 (46%)
Frame = +1
Query: 223 KIAAFFAESIQGAGGTIQFPKGYLKKAYDLVKKNGGLYVADEVQTGFGRTGD 378
K AA E +QG GG +L K G + DE+Q G GR+GD
Sbjct: 223 KTAAVIVEPVQGEGGICPAKPEFLIALRKACDKVGASLIYDEIQCGLGRSGD 274
>SPAC19D5.07 |uga1||4-aminobutyrate aminotransferase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 474
Score = 36.7 bits (81), Expect = 0.001
Identities = 20/57 (35%), Positives = 26/57 (45%)
Frame = +1
Query: 226 IAAFFAESIQGAGGTIQFPKGYLKKAYDLVKKNGGLYVADEVQTGFGRTGDGYWGFE 396
+ A E IQ GG + K +KK+ ++ DEVQTG G TG W E
Sbjct: 263 VVACIIEPIQSEGGDNHASPDFFHKLQATLKKHDVKFIVDEVQTGVGSTGT-LWAHE 318
>SPCC417.11c |||glutamate-1-semialdehyde
2,1-aminomutaseaminotransferase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 435
Score = 35.1 bits (77), Expect = 0.004
Identities = 21/58 (36%), Positives = 32/58 (55%)
Frame = +1
Query: 184 QLHELLGNSVPAGKIAAFFAESIQGAGGTIQFPKGYLKKAYDLVKKNGGLYVADEVQT 357
Q EL+ +S IAA E++QGAGG I K +++ +KN +++ DEV T
Sbjct: 193 QFKELVNSSQD---IAAVIVEAMQGAGGAIPADKEFMQTIQLECEKNDIVFILDEVMT 247
>SPCC1902.02 |mug72|SPCC663.16c|ketopantoate reductase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 574
Score = 27.9 bits (59), Expect = 0.60
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = +2
Query: 20 HSPTVWRYQCHLASTTLYIRIRSEAFGADAETPYHKCPALAIAPANASP 166
H+ +WR +C + IRIRS FG+ P P + N+ P
Sbjct: 34 HTTLIWRNRCESVLSE-GIRIRSSVFGSTKWKPDVVAPTVEQLAMNSEP 81
>SPAC24C9.15c |spn5|mde9, meu28|septin Spn5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 464
Score = 27.9 bits (59), Expect = 0.60
Identities = 10/28 (35%), Positives = 19/28 (67%)
Frame = +2
Query: 209 QCPRAKSQRSSRSPYKEPEVPYSSLKDI 292
QCP++ + + ++ +K+ EVP S+ K I
Sbjct: 63 QCPQSDTAKDKKTEFKQDEVPNSNGKSI 90
>SPAC13C5.07 |rad32|mre11|Rad32 nuclease|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 649
Score = 27.1 bits (57), Expect = 1.1
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +1
Query: 238 FAESIQGAGGTIQFPKGYLKKAYDLVKKNGGLYVA 342
F + A +QF YLKK Y K+N GLY +
Sbjct: 396 FVGRVANATDVVQF---YLKKKYTRSKRNDGLYTS 427
>SPAC24C9.07c |bgs2|meu21, pgs2|1,3-beta-glucan synthase subunit
Bgs2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1894
Score = 25.8 bits (54), Expect = 2.4
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = -1
Query: 265 LRLLVWTPRRTLRFCPRALNFL 200
L LL W +RFCP L F+
Sbjct: 341 LYLLCWGEANNIRFCPECLCFI 362
>SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 530
Score = 25.8 bits (54), Expect = 2.4
Identities = 18/77 (23%), Positives = 34/77 (44%)
Frame = -3
Query: 365 PKPVCTSSATYSPPFFLTRSYAFFRYPLGNCMVPPAPCMDSAKNAAILPAGTEFPRSSCN 186
P+ TSS+ + + T S + YP + V + S + + PA +E S+ +
Sbjct: 136 PETSATSSSEFFTSYPATSSESSSSYPASSTEVASSYSASSTEVTSSYPASSEVATSTSS 195
Query: 185 W*AYLSEVTHSPVQLQA 135
+ A +S S ++ A
Sbjct: 196 YVAPVSSSVASSSEISA 212
>SPCC290.02 |rpc34||DNA-directed RNA polymerase III complex subunit
Rpc34|Schizosaccharomyces pombe|chr 3|||Manual
Length = 301
Score = 25.8 bits (54), Expect = 2.4
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +2
Query: 74 IRIRSEAFGADAETPYHKCPALAIAPANASPQINTLT 184
IR+ +E A E+P CP I AN+ ++N +T
Sbjct: 258 IRVNNENIDAFTESPCGNCPVSDICDANS--RVNPIT 292
>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 25.8 bits (54), Expect = 2.4
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3
Query: 9 IDSHTVLPYGDTSATWLP 62
I++HT +P T A WLP
Sbjct: 258 INNHTAVPLSPTLAVWLP 275
>SPAC1751.01c |gti1||gluconate transporter inducer
Gti1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 25.4 bits (53), Expect = 3.2
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +1
Query: 319 KNGGLYVADEVQTGFGRTGDG 381
++G ++V DEVQ+G R DG
Sbjct: 50 RSGSVFVFDEVQSGIKRWTDG 70
>SPCC1672.11c |||P-type ATPase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1315
Score = 25.4 bits (53), Expect = 3.2
Identities = 14/50 (28%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = +1
Query: 199 LGNSVPAGKIAAFFAESIQGAG--GTIQFPKGYLKKAYDLVKKNGGLYVA 342
LG S+P+ +++F ++++ + QF YL+ Y+L + N G +A
Sbjct: 42 LGTSIPSS-VSSFHHQTLRPSSDASVSQFSMDYLQSEYNLNRYNDGESIA 90
>SPBC1A4.05 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 700
Score = 25.4 bits (53), Expect = 3.2
Identities = 20/75 (26%), Positives = 33/75 (44%)
Frame = +1
Query: 121 SQVPGACNCTGECVTSDKYAHQLHELLGNSVPAGKIAAFFAESIQGAGGTIQFPKGYLKK 300
S +PG+C T+D++ QL+ LL N V +++A G ++ L+K
Sbjct: 420 SNMPGSCLPGASSNTADEFTEQLN-LLKNEV--ARLSAICPSPNSGINASVLTNADNLEK 476
Query: 301 AYDLVKKNGGLYVAD 345
L+ N V D
Sbjct: 477 ENLLLVNNNAFKVDD 491
>SPAC25B8.06c |||serine-tRNA ligase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 454
Score = 24.6 bits (51), Expect = 5.6
Identities = 20/80 (25%), Positives = 34/80 (42%), Gaps = 10/80 (12%)
Frame = +1
Query: 97 WGGCRDSLSQVPGACNC----TGECVT---SDKYAHQLHELLGNSVPAGKIAAFFAESIQ 255
W R S ++ A NC +T +DK + +H L G + ++ E+ Q
Sbjct: 370 WMPARQSYGEITSASNCLEYQARRLLTRYRNDKDSGFVHTLNGTAAAIPRLIIAILENHQ 429
Query: 256 GAGGTIQFPK---GYLKKAY 306
GT++ P+ Y+ K Y
Sbjct: 430 QEDGTVKVPETLVPYIHKEY 449
>SPAC1639.02c |trk2|SPAC1F5.12|potassium ion transporter
Trk2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 880
Score = 24.6 bits (51), Expect = 5.6
Identities = 13/28 (46%), Positives = 16/28 (57%), Gaps = 3/28 (10%)
Frame = -1
Query: 265 LRLLVWTPRRTLRFCP---RALNFLEAH 191
LR ++W RT RF P +AL FL H
Sbjct: 583 LRFIIWIMIRTTRFSPNFQQALYFLFEH 610
>SPAC3G6.01 |hrp3||ATP-dependent DNA helicase
Hrp3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1388
Score = 24.2 bits (50), Expect = 7.4
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = -2
Query: 114 VSASAPNASERIRMYSVVEARWHWYRH 34
V S P+ SERI + + + +WY++
Sbjct: 597 VEKSLPSKSERILRVELSDLQMYWYKN 623
>SPCC74.02c |||mRNA cleavage and polyadenylation specificity factor
complex associated protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 710
Score = 23.8 bits (49), Expect = 9.8
Identities = 13/30 (43%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Frame = +2
Query: 296 RKRMTSSRKTEDCMSLMRYKLV-SVEPATD 382
RKR +SSR++E+ SL V S +PA++
Sbjct: 465 RKRSSSSRQSEEIASLQAENAVFSSDPASN 494
>SPCC970.03 |||cytochrome b5 reductase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 301
Score = 23.8 bits (49), Expect = 9.8
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +1
Query: 193 ELLGNSVPAGKIAAFFAESIQGAGGTIQFPKGYLKKAYDLVKKNG 327
+LL S P GK++ F+E G ++ PKG K L + G
Sbjct: 126 DLLVKSYPNGKVSKKFSELKIGDTIGVRGPKGNWKHRTGLARHFG 170
>SPBC30D10.08 |mgm101||mitochondrial nucleoid
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 267
Score = 23.8 bits (49), Expect = 9.8
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = -1
Query: 391 SPSIRRRFYRNQFVPHQR 338
SP I +RFY+N + +Q+
Sbjct: 45 SPKITQRFYQNSSIQYQK 62
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,770,466
Number of Sequences: 5004
Number of extensions: 35022
Number of successful extensions: 139
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 132
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 139
length of database: 2,362,478
effective HSP length: 66
effective length of database: 2,032,214
effective search space used: 132093910
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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