Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0007_H16
(397 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0509 + 3836284-3836547,3836927-3837157,3837253-3837423,383... 103 7e-23
03_02_0936 - 12528336-12528379,12528516-12528602,12528696-125288... 98 3e-21
05_05_0202 - 23211342-23211385,23211493-23211579,23211666-232117... 89 2e-18
04_04_1143 + 31202901-31203034,31203312-31203345,31203913-312039... 59 1e-09
02_01_0095 - 679597-679671,679775-679890,682241-682319,682446-68... 58 3e-09
08_01_0699 - 6163662-6163680,6163865-6163943,6163979-6164048,616... 54 6e-08
05_01_0220 + 1644608-1645036,1645147-1645578,1645939-1646475 54 6e-08
07_03_0274 - 16155728-16156180,16156542-16156958,16157044-16157520 53 1e-07
03_05_0467 - 24615243-24615384,24619166-24619450,24619516-246195... 52 1e-07
08_02_1375 - 26524373-26525440,26525566-26525739,26526557-26526751 45 2e-05
10_04_0016 + 7601796-7601999,7602495-7602543,7603140-7603165,760... 34 0.048
06_03_0874 - 25580417-25580419,25580504-25580604,25580828-255814... 33 0.11
12_01_0771 - 7013343-7013861 29 1.0
08_02_1284 - 25864049-25864202,25864690-25864880,25865053-258658... 29 1.4
07_03_1197 + 24719746-24720081,24721726-24721976,24722065-247222... 29 1.8
05_01_0137 + 917533-917814,918080-918352 29 1.8
01_05_0490 + 22672241-22674679 29 1.8
09_04_0081 - 14400293-14400397,14400953-14401036,14401144-144012... 28 2.4
12_01_1064 - 10978039-10978190,10978731-10978865,10979217-109796... 28 3.1
08_02_0672 - 19904353-19904839,19905646-19905704,19906137-199063... 28 3.1
12_02_0543 + 20178096-20178500 27 4.1
08_02_0227 - 14485676-14487316 27 4.1
06_03_1146 - 28004896-28005554,28005664-28005844 27 4.1
09_01_0085 - 1219117-1219653 27 5.5
03_06_0124 - 31830797-31831371,31831510-31831532,31832143-318322... 27 5.5
03_05_1055 - 29998212-29998388,29998464-29998786,29999066-29999243 27 5.5
09_04_0529 + 18356964-18358307,18359829-18359944,18360036-183601... 27 7.2
01_06_0254 + 27915608-27915755,27915837-27916042,27917069-27917305 27 7.2
09_03_0034 + 11751965-11752010,11752138-11752205,11753142-117532... 26 9.6
06_03_1329 - 29368815-29370064,29370186-29370318 26 9.6
06_03_0038 - 15778446-15778577,15778685-15779020,15779106-157792... 26 9.6
05_01_0347 - 2717275-2717613,2717994-2718077,2718185-2718247,271... 26 9.6
01_06_0100 - 26424769-26425545,26425666-26425697,26425778-264258... 26 9.6
>03_01_0509 +
3836284-3836547,3836927-3837157,3837253-3837423,
3838379-3838522,3838640-3838819,3838926-3839151,
3839326-3839439,3839541-3839627,3839711-3839754
Length = 486
Score = 103 bits (246), Expect = 7e-23
Identities = 55/132 (41%), Positives = 81/132 (61%), Gaps = 1/132 (0%)
Frame = +1
Query: 4 MGLTATQSYRMAIPVPPG-FHHAVHPDPFRGIWGGCRDSLSQVPGACNCTGECVTSDKYA 180
+GLT Q+++ P+P G HH ++PDP+RG +G D+++ YA
Sbjct: 208 IGLTGLQTWKY--PIPQGEIHHVMNPDPYRGTFGS--DAVA-----------------YA 246
Query: 181 HQLHELLGNSVPAGKIAAFFAESIQGAGGTIQFPKGYLKKAYDLVKKNGGLYVADEVQTG 360
++ E + N +G++A F AE+ QG GG ++ GYLK AYD V+K GG+ +ADEVQ+G
Sbjct: 247 KEVEEQI-NYGTSGRVAGFIAETFQGVGGAVELAPGYLKLAYDTVRKAGGVCIADEVQSG 305
Query: 361 FGRTGDGYWGFE 396
FGRTG YWGF+
Sbjct: 306 FGRTGSHYWGFQ 317
>03_02_0936 -
12528336-12528379,12528516-12528602,12528696-12528809,
12528895-12529120,12529200-12529523,12529603-12529773,
12529870-12530100,12530291-12530479,12531176-12531178
Length = 462
Score = 97.9 bits (233), Expect = 3e-21
Identities = 51/131 (38%), Positives = 75/131 (57%)
Frame = +1
Query: 4 MGLTATQSYRMAIPVPPGFHHAVHPDPFRGIWGGCRDSLSQVPGACNCTGECVTSDKYAH 183
MG TA ++++ ++ V G HHAV+PDP+RG +G ++KYA
Sbjct: 184 MGATAQKNWKFSV-VQSGVHHAVNPDPYRGAFGS-------------------DAEKYAR 223
Query: 184 QLHELLGNSVPAGKIAAFFAESIQGAGGTIQFPKGYLKKAYDLVKKNGGLYVADEVQTGF 363
+ E++ G++A F +E+IQG GG ++ GYL AY+ V+ GGL +ADEVQ GF
Sbjct: 224 DVQEIIEFGT-TGQVAGFISEAIQGVGGIVELSPGYLPLAYEAVRSAGGLCIADEVQAGF 282
Query: 364 GRTGDGYWGFE 396
R G +WGFE
Sbjct: 283 ARVGSHFWGFE 293
>05_05_0202 -
23211342-23211385,23211493-23211579,23211666-23211779,
23211886-23212111,23212222-23212401,23212511-23212654,
23212818-23212979,23213093-23213296,23214109-23214156,
23214601-23214846
Length = 484
Score = 88.6 bits (210), Expect = 2e-18
Identities = 44/114 (38%), Positives = 63/114 (55%)
Frame = +1
Query: 55 GFHHAVHPDPFRGIWGGCRDSLSQVPGACNCTGECVTSDKYAHQLHELLGNSVPAGKIAA 234
G HHA++PDP+RG +G +KYA + E++ G++
Sbjct: 222 GVHHALNPDPYRGAFGS-------------------DGEKYARDVQEIIDFGT-TGRVGG 261
Query: 235 FFAESIQGAGGTIQFPKGYLKKAYDLVKKNGGLYVADEVQTGFGRTGDGYWGFE 396
F +E+IQG GG ++ GYL Y++V+K GGL +ADEVQ G RTG +WGFE
Sbjct: 262 FISEAIQGVGGIVELAPGYLPAVYNMVRKAGGLCIADEVQAGVARTGSHFWGFE 315
>04_04_1143 +
31202901-31203034,31203312-31203345,31203913-31203985,
31204090-31204187,31204356-31204448,31205081-31205154,
31205680-31205768,31205859-31205935,31206016-31206090,
31206438-31206485,31206571-31206654,31206734-31206821,
31206896-31206974,31207072-31207162,31207724-31207802,
31208219-31208334,31208430-31208488,31210292-31210342,
31211418-31211444,31211725-31211809,31211952-31212024,
31212154-31212251,31212385-31212477,31212972-31213045,
31213258-31213296,31213410-31213498,31213583-31213707,
31213750-31213824,31214225-31214272,31214359-31214442,
31214574-31214661,31214762-31214840,31214930-31215020,
31215113-31215191,31215485-31215600,31215910-31215987
Length = 960
Score = 59.3 bits (137), Expect = 1e-09
Identities = 29/51 (56%), Positives = 34/51 (66%)
Frame = +1
Query: 223 KIAAFFAESIQGAGGTIQFPKGYLKKAYDLVKKNGGLYVADEVQTGFGRTG 375
KIAAF AE + GAGG I PK Y +K +VKK L++ADEV T FGR G
Sbjct: 715 KIAAFIAEPVMGAGGVIPPPKTYFEKVQAIVKKYDILFIADEVITAFGRLG 765
Score = 55.2 bits (127), Expect = 2e-08
Identities = 30/68 (44%), Positives = 40/68 (58%)
Frame = +1
Query: 172 KYAHQLHELLGNSVPAGKIAAFFAESIQGAGGTIQFPKGYLKKAYDLVKKNGGLYVADEV 351
+ A L L+ P +AAF AE + GAGG I PK Y +K +++K L++ADEV
Sbjct: 208 RLADNLENLILKEGPE-TVAAFIAEPVIGAGGVIPPPKTYFEKIQAVLQKYDVLFIADEV 266
Query: 352 QTGFGRTG 375
TGFGR G
Sbjct: 267 ITGFGRLG 274
>02_01_0095 -
679597-679671,679775-679890,682241-682319,682446-682539,
682638-682716,682846-682933,683023-683106,683351-683398,
684044-684118,684274-684315,684347-684416,684551-684589,
685118-685191,686936-687028,687203-687300,688170-688236
Length = 406
Score = 58.0 bits (134), Expect = 3e-09
Identities = 35/90 (38%), Positives = 49/90 (54%)
Frame = +1
Query: 106 CRDSLSQVPGACNCTGECVTSDKYAHQLHELLGNSVPAGKIAAFFAESIQGAGGTIQFPK 285
C+D L A TG ++ + ++++ G +IAAF AE + GAGG I PK
Sbjct: 128 CQDVLFCTQTALT-TGASISLSAFFDEINDFCGR-----QIAAFIAEPVIGAGGVILPPK 181
Query: 286 GYLKKAYDLVKKNGGLYVADEVQTGFGRTG 375
Y +K +VKK L++ DEV TGFGR G
Sbjct: 182 TYFEKIQAVVKKYDILFIVDEVITGFGRLG 211
>08_01_0699 -
6163662-6163680,6163865-6163943,6163979-6164048,
6164151-6164266,6164656-6164734,6164831-6164921,
6165006-6165084,6165161-6165248,6165371-6165454,
6165544-6165591,6166118-6166192,6166286-6166362,
6166460-6166548,6166711-6166749,6167133-6167206,
6167496-6167588,6167820-6167917,6168100-6168172,
6168322-6168406,6168513-6168634,6169307-6169414,
6169537-6169608
Length = 585
Score = 53.6 bits (123), Expect = 6e-08
Identities = 27/50 (54%), Positives = 32/50 (64%)
Frame = +1
Query: 226 IAAFFAESIQGAGGTIQFPKGYLKKAYDLVKKNGGLYVADEVQTGFGRTG 375
IAAF AE + GAGG I PK Y +K ++KK L +ADEV T FGR G
Sbjct: 311 IAAFIAEPVMGAGGVIPPPKTYFEKIQAVLKKYDILLIADEVITAFGRLG 360
>05_01_0220 + 1644608-1645036,1645147-1645578,1645939-1646475
Length = 465
Score = 53.6 bits (123), Expect = 6e-08
Identities = 28/62 (45%), Positives = 35/62 (56%)
Frame = +1
Query: 211 VPAGKIAAFFAESIQGAGGTIQFPKGYLKKAYDLVKKNGGLYVADEVQTGFGRTGDGYWG 390
+ +GKIAA F E +QG GG K +L+ D + G L V DEVQ G GRTG W
Sbjct: 242 IQSGKIAAVFVEPVQGEGGIHSATKEFLQGLRDACDEAGALLVFDEVQCGLGRTG-YLWA 300
Query: 391 FE 396
+E
Sbjct: 301 YE 302
>07_03_0274 - 16155728-16156180,16156542-16156958,16157044-16157520
Length = 448
Score = 52.8 bits (121), Expect = 1e-07
Identities = 28/62 (45%), Positives = 35/62 (56%)
Frame = +1
Query: 211 VPAGKIAAFFAESIQGAGGTIQFPKGYLKKAYDLVKKNGGLYVADEVQTGFGRTGDGYWG 390
+ +GKIAA F E +QG GG K +L+ D + G L V DEVQ G GRTG W
Sbjct: 253 IQSGKIAAVFVEPMQGEGGIHSATKEFLQGLRDACDEAGALLVFDEVQCGLGRTG-YLWA 311
Query: 391 FE 396
+E
Sbjct: 312 YE 313
>03_05_0467 -
24615243-24615384,24619166-24619450,24619516-24619596,
24619807-24619904,24620038-24620190,24620705-24620760,
24620844-24621003,24621416-24621646,24621795-24621903,
24622642-24622799
Length = 490
Score = 52.4 bits (120), Expect = 1e-07
Identities = 25/51 (49%), Positives = 30/51 (58%)
Frame = +1
Query: 223 KIAAFFAESIQGAGGTIQFPKGYLKKAYDLVKKNGGLYVADEVQTGFGRTG 375
+I F E IQG G I P GYLK DL ++ L +ADE+QTG RTG
Sbjct: 224 RICGFLFEPIQGEAGVIIPPDGYLKAVRDLCSRHNILMIADEIQTGIARTG 274
>08_02_1375 - 26524373-26525440,26525566-26525739,26526557-26526751
Length = 478
Score = 45.2 bits (102), Expect = 2e-05
Identities = 23/48 (47%), Positives = 28/48 (58%)
Frame = +1
Query: 220 GKIAAFFAESIQGAGGTIQFPKGYLKKAYDLVKKNGGLYVADEVQTGF 363
G+IAA F E + G G I G+L DL K++G L V DEV TGF
Sbjct: 249 GQIAAVFLEPVVGNAGFIPPQPGFLNALRDLTKQDGALLVFDEVMTGF 296
>10_04_0016 +
7601796-7601999,7602495-7602543,7603140-7603165,
7603334-7603339,7603496-7603570,7603880-7603933
Length = 137
Score = 33.9 bits (74), Expect = 0.048
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = +1
Query: 223 KIAAFFAESIQGAGGTIQFPKGYLKK 300
+IAAF AE + GAGG I PK Y +K
Sbjct: 95 QIAAFIAEPVMGAGGVIAPPKTYFEK 120
>06_03_0874 -
25580417-25580419,25580504-25580604,25580828-25581411,
25581523-25581594,25581667-25581793,25583412-25583516,
25583643-25583676
Length = 341
Score = 32.7 bits (71), Expect = 0.11
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = -3
Query: 383 YPSPVLPKPVCTSSATYSPPFFLTRSYAFFRYPLGNCMVPPAP 255
YP+ +P P TS+ + PP L R YP + PP P
Sbjct: 189 YPASHVPAPYPTSAYPHPPPSLLARDVEHAAYPPTSTTYPPQP 231
>12_01_0771 - 7013343-7013861
Length = 172
Score = 29.5 bits (63), Expect = 1.0
Identities = 21/90 (23%), Positives = 40/90 (44%), Gaps = 2/90 (2%)
Frame = +1
Query: 112 DSLSQVPGACNCTGE-CVTSDKYAHQLHELLGNSVPAGKIAAFFAESIQGAGGTIQFPKG 288
D L + G+ CV +++ +LG+ AG+ A +I G GG
Sbjct: 40 DELDATMDKIDANGDGCVDVEEFGLLYRSILGDDA-AGRAPRTAAAAIGGEGGAPDDEDE 98
Query: 289 YLKKAYDLVKKNG-GLYVADEVQTGFGRTG 375
+++A+++ +NG G DE+++ G
Sbjct: 99 GMREAFNVFDQNGDGFITVDELRSVLSSLG 128
>08_02_1284 -
25864049-25864202,25864690-25864880,25865053-25865895,
25865953-25866896,25867052-25867190,25867259-25867334,
25867666-25867788,25867869-25867952,25868145-25868235,
25868448-25868532,25868620-25868784,25868872-25868928,
25870141-25870302
Length = 1037
Score = 29.1 bits (62), Expect = 1.4
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Frame = +1
Query: 112 DSLSQVPGACNCTGECVTSDKYAHQLHELLGNSVPAGK---IAAFFAESIQGAGG 267
D QV + + +CV +HQ+ +L GN +P K + A S+ AGG
Sbjct: 625 DLQQQVINSQSAPQQCVQQKVQSHQVQDLTGNVIPNSKSDIATSMGASSLHVAGG 679
>07_03_1197 +
24719746-24720081,24721726-24721976,24722065-24722233,
24722339-24722683
Length = 366
Score = 28.7 bits (61), Expect = 1.8
Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = +1
Query: 31 RMAIPVPPGFHHAVHP-DPFRGIWGGCRDSLSQVPGACNCTGECVTSDKYAHQLHE 195
+ I VP GF + ++ D I G +S AC C G V+ KY + + +
Sbjct: 54 KKTIRVPEGFDYELYNRDDINRILGPRASCISFKDSACRCFGYMVSKKKYIYTIDD 109
>05_01_0137 + 917533-917814,918080-918352
Length = 184
Score = 28.7 bits (61), Expect = 1.8
Identities = 21/65 (32%), Positives = 26/65 (40%), Gaps = 3/65 (4%)
Frame = -3
Query: 377 SPVLPKPVCTSSATYSPP---FFLTRSYAFFRYPLGNCMVPPAPCMDSAKNAAILPAGTE 207
SP P T++ T SPP F RS+ C PP P + +LPA
Sbjct: 53 SPTTSSPAPTTTTTTSPPPPPSFRRRSFC------RRCTPPPPPPPAAGGGGVVLPAAEA 106
Query: 206 FPRSS 192
RSS
Sbjct: 107 IGRSS 111
>01_05_0490 + 22672241-22674679
Length = 812
Score = 28.7 bits (61), Expect = 1.8
Identities = 16/46 (34%), Positives = 21/46 (45%)
Frame = -3
Query: 392 KPQYPSPVLPKPVCTSSATYSPPFFLTRSYAFFRYPLGNCMVPPAP 255
KP P P P P PPF+ R+ ++ YPL PP+P
Sbjct: 654 KPPQP-PSRPAPPPPPPPQQQPPFYPRRAVVYYTYPL----PPPSP 694
>09_04_0081 -
14400293-14400397,14400953-14401036,14401144-14401214,
14401293-14401380,14401487-14401678,14401772-14402704
Length = 490
Score = 28.3 bits (60), Expect = 2.4
Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Frame = +2
Query: 80 IRSEAFGADAETPYHKCPALAIAPANASPQINTLTNYM--SF*EIQCPRAKSQRSSRSPY 253
+ S+ D ET Y A+ + PA S + + S E+ +A++Q R P
Sbjct: 78 VESDKADMDVETFYDGIVAVVLVPAGESAPVGAPIALLAESEEEVAVAQARAQALPRGPG 137
Query: 254 KEPEVPY 274
+EP P+
Sbjct: 138 QEPPPPH 144
>12_01_1064 -
10978039-10978190,10978731-10978865,10979217-10979605,
10979669-10979892,10980011-10980172,10980256-10980906,
10981583-10981804
Length = 644
Score = 27.9 bits (59), Expect = 3.1
Identities = 14/36 (38%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = -2
Query: 339 DIQSSVFLDEVIRFLQISFRELYGTSG-SLYGLREE 235
D S+ F DE++ ++ISF ++ T G L GL++E
Sbjct: 368 DNSSTPFADELVSAVEISFPSMFDTVGPHLSGLQDE 403
>08_02_0672 -
19904353-19904839,19905646-19905704,19906137-19906352,
19906845-19907422,19907506-19908180,19908263-19908653,
19909469-19909621,19909727-19909980,19911023-19911479
Length = 1089
Score = 27.9 bits (59), Expect = 3.1
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = -3
Query: 380 PSPVLPKPVCTSSATYSPPFFLTRSYAFFRYPLGNCMVPPAP 255
PSP LP P ++ +PP S+A PLG PP P
Sbjct: 52 PSPTLPPPPMSTPPVVAPPM---HSFAPSFRPLGAPPPPPPP 90
>12_02_0543 + 20178096-20178500
Length = 134
Score = 27.5 bits (58), Expect = 4.1
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = -3
Query: 149 VQLQAPGTCDKESLHPPQMPLNGSGCTAWWKPGGTGI 39
V L G +S PPQ PLNGSG + GG+ +
Sbjct: 17 VCLAPGGGVPPDSPSPPQPPLNGSGGSLGVSGGGSTV 53
>08_02_0227 - 14485676-14487316
Length = 546
Score = 27.5 bits (58), Expect = 4.1
Identities = 17/53 (32%), Positives = 23/53 (43%)
Frame = -3
Query: 353 CTSSATYSPPFFLTRSYAFFRYPLGNCMVPPAPCMDSAKNAAILPAGTEFPRS 195
C S +P R Y + PPAPC++ A +I +GTE RS
Sbjct: 269 CRSFELDAPALICFRYAQISSYEQSISLKPPAPCLEKANLESI--SGTEIFRS 319
>06_03_1146 - 28004896-28005554,28005664-28005844
Length = 279
Score = 27.5 bits (58), Expect = 4.1
Identities = 16/46 (34%), Positives = 20/46 (43%)
Frame = -3
Query: 377 SPVLPKPVCTSSATYSPPFFLTRSYAFFRYPLGNCMVPPAPCMDSA 240
SP+ P P T+S SPP + + P G PP P D A
Sbjct: 192 SPMAPAPAPTTSTPSSPPAPAAMAPSPSTTPGGVAQPPPPPGTDGA 237
>09_01_0085 - 1219117-1219653
Length = 178
Score = 27.1 bits (57), Expect = 5.5
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = -3
Query: 221 PAGTEFPRSSCNW*AYLSEVTHSPVQLQAPGTCDKESLHPPQMPLNGSGCTAW 63
PA TE P +W + + E++ QLQA K L + L SG AW
Sbjct: 67 PAETE-PEPEVDW-SVMEELSRLCGQLQAMVDAHKARLEKAEEKLRESGAAAW 117
>03_06_0124 -
31830797-31831371,31831510-31831532,31832143-31832271,
31833287-31834842
Length = 760
Score = 27.1 bits (57), Expect = 5.5
Identities = 20/63 (31%), Positives = 27/63 (42%)
Frame = +1
Query: 193 ELLGNSVPAGKIAAFFAESIQGAGGTIQFPKGYLKKAYDLVKKNGGLYVADEVQTGFGRT 372
EL S+ AG F S G I G L+K + V + Y + + TGFG +
Sbjct: 189 ELPNVSISAGDGTGVFNASGNSLYGAIGDVLGPLRKRFRQVDLSRN-YFTEVIGTGFGNS 247
Query: 373 GDG 381
DG
Sbjct: 248 SDG 250
>03_05_1055 - 29998212-29998388,29998464-29998786,29999066-29999243
Length = 225
Score = 27.1 bits (57), Expect = 5.5
Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 6/44 (13%)
Frame = +2
Query: 41 YQCHLAST------TLYIRIRSEAFGADAETPYHKCPALAIAPA 154
Y C+L+++ TLYI AF +D+ YH PA+A+A A
Sbjct: 106 YACYLSTSSGPVIGTLYISTARLAFCSDSPISYH-APAVAVAGA 148
>09_04_0529 +
18356964-18358307,18359829-18359944,18360036-18360133,
18360234-18360418
Length = 580
Score = 26.6 bits (56), Expect = 7.2
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -2
Query: 309 VIRFLQISFRELYGTSGSLYGLR 241
V+R L + ELYG G ++G+R
Sbjct: 107 VVRELVVGLSELYGVRGGVFGVR 129
>01_06_0254 + 27915608-27915755,27915837-27916042,27917069-27917305
Length = 196
Score = 26.6 bits (56), Expect = 7.2
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = -3
Query: 380 PSPVLPKPVCTSSATYSPPFFLTRSYAFFRYPLG 279
PSP P P S SP L+ SYA F P+G
Sbjct: 19 PSPAQPAPASLSLRAVSPRARLSASYAAF--PIG 50
>09_03_0034 +
11751965-11752010,11752138-11752205,11753142-11753252,
11753626-11753712,11753800-11754008,11754653-11754926,
11756595-11757079,11758367-11758484,11758584-11758700,
11758779-11758925,11759061-11759135,11759198-11759266,
11759914-11760024,11760183-11760267,11760404-11760501,
11760628-11760720,11760806-11760880
Length = 755
Score = 26.2 bits (55), Expect = 9.6
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = +2
Query: 95 FGADAETPYHKCPALAIAPA 154
F A A P +CPALAIA A
Sbjct: 361 FSARAAAPLPECPALAIASA 380
>06_03_1329 - 29368815-29370064,29370186-29370318
Length = 460
Score = 26.2 bits (55), Expect = 9.6
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +3
Query: 3 DGIDSHTVLPYGDTSATWLPPRCT 74
D + T++P+G + T +PP CT
Sbjct: 132 DDVREFTLVPFGGANHTAVPPLCT 155
>06_03_0038 -
15778446-15778577,15778685-15779020,15779106-15779225,
15779280-15779765,15779861-15779994,15780111-15780230,
15784881-15785018,15785404-15786079,15786179-15786340,
15786424-15786618,15786839-15787084,15787758-15787952
Length = 979
Score = 26.2 bits (55), Expect = 9.6
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = -2
Query: 339 DIQSSVFLDEVIRFLQISFRELYGTSG-SLYGLREE 235
D + F DE++ ++ISF ++ T G L GL++E
Sbjct: 289 DNSGTPFADELVSAVEISFPSMFDTVGPHLSGLQDE 324
>05_01_0347 -
2717275-2717613,2717994-2718077,2718185-2718247,
2718350-2718488,2719118-2719219,2719324-2719424,
2719915-2719981,2720074-2720120,2720246-2720440,
2720523-2720569,2721242-2721339,2722219-2722337,
2722438-2722611
Length = 524
Score = 26.2 bits (55), Expect = 9.6
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -3
Query: 320 FLTRSYAFFRYPLGNCMVPPAP 255
F T + FF PL N ++PP P
Sbjct: 409 FSTMVFGFFTKPLLNLLIPPRP 430
>01_06_0100 -
26424769-26425545,26425666-26425697,26425778-26425894,
26426067-26426118,26426229-26426281,26426883-26427585
Length = 577
Score = 26.2 bits (55), Expect = 9.6
Identities = 12/23 (52%), Positives = 13/23 (56%), Gaps = 2/23 (8%)
Frame = +1
Query: 49 PPGFHHA--VHPDPFRGIWGGCR 111
P G HH V P P R + GGCR
Sbjct: 169 PDGDHHGEIVWPAPSRSLLGGCR 191
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,831,720
Number of Sequences: 37544
Number of extensions: 295896
Number of successful extensions: 1102
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1046
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1102
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 684860244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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