Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0007_H11
(338 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY094632-1|AAM10985.1| 281|Drosophila melanogaster AT03531p pro... 30 0.88
AE014297-3019|AAF55902.2| 281|Drosophila melanogaster CG15498-P... 30 0.88
U78084-1|AAB53369.1| 527|Drosophila melanogaster presenilin pro... 27 8.2
U77934-1|AAB61139.1| 541|Drosophila melanogaster presenilin hom... 27 8.2
AY119546-1|AAM50200.1| 836|Drosophila melanogaster GH25858p pro... 27 8.2
AY061316-1|AAL28864.1| 541|Drosophila melanogaster LD23505p pro... 27 8.2
AJ309005-1|CAC35209.1| 2382|Drosophila melanogaster GRAAL2 prote... 27 8.2
AF093402-2|AAD52708.1| 527|Drosophila melanogaster presenilin a... 27 8.2
AF093402-1|AAD52707.1| 541|Drosophila melanogaster presenilin a... 27 8.2
AF084184-2|AAC33128.1| 527|Drosophila melanogaster presenilin s... 27 8.2
AF084184-1|AAC33129.1| 541|Drosophila melanogaster presenilin l... 27 8.2
AF017024-1|AAD01610.1| 541|Drosophila melanogaster presenilin p... 27 8.2
AE014297-2745|AAN13817.2| 836|Drosophila melanogaster CG4836-PA... 27 8.2
AE014297-2744|AAN13816.2| 1214|Drosophila melanogaster CG4836-PB... 27 8.2
AE014297-2743|AAF55731.2| 1217|Drosophila melanogaster CG4836-PC... 27 8.2
AE014296-3364|AAN12132.1| 527|Drosophila melanogaster CG18803-P... 27 8.2
AE014296-3363|AAF51598.1| 541|Drosophila melanogaster CG18803-P... 27 8.2
AE013599-698|AAF59055.2| 513|Drosophila melanogaster CG14744-PA... 27 8.2
>AY094632-1|AAM10985.1| 281|Drosophila melanogaster AT03531p
protein.
Length = 281
Score = 29.9 bits (64), Expect = 0.88
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = -2
Query: 232 PSPAPALYRSISIITPNGEDTT 167
PSP PAL S I++PN +D T
Sbjct: 112 PSPRPALRNSFRIVSPNEDDRT 133
>AE014297-3019|AAF55902.2| 281|Drosophila melanogaster CG15498-PA
protein.
Length = 281
Score = 29.9 bits (64), Expect = 0.88
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = -2
Query: 232 PSPAPALYRSISIITPNGEDTT 167
PSP PAL S I++PN +D T
Sbjct: 112 PSPRPALRNSFRIVSPNEDDRT 133
>U78084-1|AAB53369.1| 527|Drosophila melanogaster presenilin
protein.
Length = 527
Score = 26.6 bits (56), Expect = 8.2
Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Frame = +3
Query: 12 IKLCLLAVIAVCNVRAFYSSDHEY-NRTALGDAIDKTSLQFLKETYTSSKDKNVVSSPLG 188
+ LC+L V+A N +FY+S Y T + + S++F +++ + ++ S +
Sbjct: 111 VSLCMLVVVATINSISFYNSTDVYLLYTPFHEQSPEPSVKF----WSALANSLILMSVVV 166
Query: 189 VM--MLMLLYK 215
VM +L++LYK
Sbjct: 167 VMTFLLIVLYK 177
>U77934-1|AAB61139.1| 541|Drosophila melanogaster presenilin
homolog protein.
Length = 541
Score = 26.6 bits (56), Expect = 8.2
Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Frame = +3
Query: 12 IKLCLLAVIAVCNVRAFYSSDHEY-NRTALGDAIDKTSLQFLKETYTSSKDKNVVSSPLG 188
+ LC+L V+A N +FY+S Y T + + S++F +++ + ++ S +
Sbjct: 111 VSLCMLVVVATINSISFYNSTDVYLLYTPFHEQSPEPSVKF----WSALANSLILMSVVV 166
Query: 189 VM--MLMLLYK 215
VM +L++LYK
Sbjct: 167 VMTFLLIVLYK 177
>AY119546-1|AAM50200.1| 836|Drosophila melanogaster GH25858p
protein.
Length = 836
Score = 26.6 bits (56), Expect = 8.2
Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 3/31 (9%)
Frame = -3
Query: 243 PHDYLHR---RQLCTEALASSRLMVKTQHSC 160
P LH RQLCT A + S+ +T H C
Sbjct: 26 PRSLLHAERLRQLCTSASSGSKSSRRTNHPC 56
>AY061316-1|AAL28864.1| 541|Drosophila melanogaster LD23505p
protein.
Length = 541
Score = 26.6 bits (56), Expect = 8.2
Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Frame = +3
Query: 12 IKLCLLAVIAVCNVRAFYSSDHEY-NRTALGDAIDKTSLQFLKETYTSSKDKNVVSSPLG 188
+ LC+L V+A N +FY+S Y T + + S++F +++ + ++ S +
Sbjct: 111 VSLCMLVVVATINSISFYNSTDVYLLYTPFHEQSPEPSVKF----WSALANSLILMSVVV 166
Query: 189 VM--MLMLLYK 215
VM +L++LYK
Sbjct: 167 VMTFLLIVLYK 177
>AJ309005-1|CAC35209.1| 2382|Drosophila melanogaster GRAAL2 protein
protein.
Length = 2382
Score = 26.6 bits (56), Expect = 8.2
Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 5/59 (8%)
Frame = -3
Query: 198 ASSRLMVKTQHSCPSMM---YTFP*ETAKKF-CQWHRLRLSCCTRGQRNKTLAR-CRPR 37
A+ + + + SCP + Y +P CQ+ L + CC GQR R C PR
Sbjct: 432 ANVQSQLSSLRSCPPNVQKNYPYPFHAGHYVRCQYGALEIICCPTGQRYSLSHRQCVPR 490
>AF093402-2|AAD52708.1| 527|Drosophila melanogaster presenilin a1
protein.
Length = 527
Score = 26.6 bits (56), Expect = 8.2
Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Frame = +3
Query: 12 IKLCLLAVIAVCNVRAFYSSDHEY-NRTALGDAIDKTSLQFLKETYTSSKDKNVVSSPLG 188
+ LC+L V+A N +FY+S Y T + + S++F +++ + ++ S +
Sbjct: 111 VSLCMLVVVATINSISFYNSTDVYLLYTPFHEQSPEPSVKF----WSALANSLILMSVVV 166
Query: 189 VM--MLMLLYK 215
VM +L++LYK
Sbjct: 167 VMTFLLIVLYK 177
>AF093402-1|AAD52707.1| 541|Drosophila melanogaster presenilin a2
protein.
Length = 541
Score = 26.6 bits (56), Expect = 8.2
Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Frame = +3
Query: 12 IKLCLLAVIAVCNVRAFYSSDHEY-NRTALGDAIDKTSLQFLKETYTSSKDKNVVSSPLG 188
+ LC+L V+A N +FY+S Y T + + S++F +++ + ++ S +
Sbjct: 111 VSLCMLVVVATINSISFYNSTDVYLLYTPFHEQSPEPSVKF----WSALANSLILMSVVV 166
Query: 189 VM--MLMLLYK 215
VM +L++LYK
Sbjct: 167 VMTFLLIVLYK 177
>AF084184-2|AAC33128.1| 527|Drosophila melanogaster presenilin
short form protein.
Length = 527
Score = 26.6 bits (56), Expect = 8.2
Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Frame = +3
Query: 12 IKLCLLAVIAVCNVRAFYSSDHEY-NRTALGDAIDKTSLQFLKETYTSSKDKNVVSSPLG 188
+ LC+L V+A N +FY+S Y T + + S++F +++ + ++ S +
Sbjct: 111 VSLCMLVVVATINSISFYNSTDVYLLYTPFHEQSPEPSVKF----WSALANSLILMSVVV 166
Query: 189 VM--MLMLLYK 215
VM +L++LYK
Sbjct: 167 VMTFLLIVLYK 177
>AF084184-1|AAC33129.1| 541|Drosophila melanogaster presenilin long
form protein.
Length = 541
Score = 26.6 bits (56), Expect = 8.2
Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Frame = +3
Query: 12 IKLCLLAVIAVCNVRAFYSSDHEY-NRTALGDAIDKTSLQFLKETYTSSKDKNVVSSPLG 188
+ LC+L V+A N +FY+S Y T + + S++F +++ + ++ S +
Sbjct: 111 VSLCMLVVVATINSISFYNSTDVYLLYTPFHEQSPEPSVKF----WSALANSLILMSVVV 166
Query: 189 VM--MLMLLYK 215
VM +L++LYK
Sbjct: 167 VMTFLLIVLYK 177
>AF017024-1|AAD01610.1| 541|Drosophila melanogaster presenilin
protein.
Length = 541
Score = 26.6 bits (56), Expect = 8.2
Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Frame = +3
Query: 12 IKLCLLAVIAVCNVRAFYSSDHEY-NRTALGDAIDKTSLQFLKETYTSSKDKNVVSSPLG 188
+ LC+L V+A N +FY+S Y T + + S++F +++ + ++ S +
Sbjct: 111 VSLCMLVVVATINSISFYNSTDVYLLYTPFHEQSPEPSVKF----WSALANSLILMSVVV 166
Query: 189 VM--MLMLLYK 215
VM +L++LYK
Sbjct: 167 VMTFLLIVLYK 177
>AE014297-2745|AAN13817.2| 836|Drosophila melanogaster CG4836-PA,
isoform A protein.
Length = 836
Score = 26.6 bits (56), Expect = 8.2
Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 3/31 (9%)
Frame = -3
Query: 243 PHDYLHR---RQLCTEALASSRLMVKTQHSC 160
P LH RQLCT A + S+ +T H C
Sbjct: 26 PRSLLHAERLRQLCTSASSGSKSSRRTNHPC 56
>AE014297-2744|AAN13816.2| 1214|Drosophila melanogaster CG4836-PB,
isoform B protein.
Length = 1214
Score = 26.6 bits (56), Expect = 8.2
Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 3/31 (9%)
Frame = -3
Query: 243 PHDYLHR---RQLCTEALASSRLMVKTQHSC 160
P LH RQLCT A + S+ +T H C
Sbjct: 26 PRSLLHAERLRQLCTSASSGSKSSRRTNHPC 56
>AE014297-2743|AAF55731.2| 1217|Drosophila melanogaster CG4836-PC,
isoform C protein.
Length = 1217
Score = 26.6 bits (56), Expect = 8.2
Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 3/31 (9%)
Frame = -3
Query: 243 PHDYLHR---RQLCTEALASSRLMVKTQHSC 160
P LH RQLCT A + S+ +T H C
Sbjct: 26 PRSLLHAERLRQLCTSASSGSKSSRRTNHPC 56
>AE014296-3364|AAN12132.1| 527|Drosophila melanogaster CG18803-PB,
isoform B protein.
Length = 527
Score = 26.6 bits (56), Expect = 8.2
Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Frame = +3
Query: 12 IKLCLLAVIAVCNVRAFYSSDHEY-NRTALGDAIDKTSLQFLKETYTSSKDKNVVSSPLG 188
+ LC+L V+A N +FY+S Y T + + S++F +++ + ++ S +
Sbjct: 111 VSLCMLVVVATINSISFYNSTDVYLLYTPFHEQSPEPSVKF----WSALANSLILMSVVV 166
Query: 189 VM--MLMLLYK 215
VM +L++LYK
Sbjct: 167 VMTFLLIVLYK 177
>AE014296-3363|AAF51598.1| 541|Drosophila melanogaster CG18803-PA,
isoform A protein.
Length = 541
Score = 26.6 bits (56), Expect = 8.2
Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Frame = +3
Query: 12 IKLCLLAVIAVCNVRAFYSSDHEY-NRTALGDAIDKTSLQFLKETYTSSKDKNVVSSPLG 188
+ LC+L V+A N +FY+S Y T + + S++F +++ + ++ S +
Sbjct: 111 VSLCMLVVVATINSISFYNSTDVYLLYTPFHEQSPEPSVKF----WSALANSLILMSVVV 166
Query: 189 VM--MLMLLYK 215
VM +L++LYK
Sbjct: 167 VMTFLLIVLYK 177
>AE013599-698|AAF59055.2| 513|Drosophila melanogaster CG14744-PA
protein.
Length = 513
Score = 26.6 bits (56), Expect = 8.2
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +3
Query: 72 DHEYNRTALGDAIDKTSLQFLKETYTSSKDKNVVSSPLG 188
D+E NRTAL D+ + +LQ E + S + + LG
Sbjct: 248 DYELNRTALHDSENPKNLQLFTEFFQSLNPVDAEAWQLG 286
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,519,807
Number of Sequences: 53049
Number of extensions: 308218
Number of successful extensions: 1118
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1108
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1118
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 777358641
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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