Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0007_H11
         (338 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    20   7.1  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    20   7.1  
DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    20   9.4  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    20   9.4  

>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 20.2 bits (40), Expect = 7.1
 Identities = 10/40 (25%), Positives = 22/40 (55%)
 Frame = -2

Query: 145  YVSLRNCKEVLSMASPKAVLLYSWSEE*NARTLQTAITAN 26
            ++ LR+  E+L ++  + V    W    NAR ++ ++ +N
Sbjct: 886  FLPLRSL-EILRLSGNRLVTFPVWQVTLNARLVELSLGSN 924


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 20.2 bits (40), Expect = 7.1
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -3

Query: 237 DYLHRRQLCTEALASSRLMVKTQ 169
           DYLH R +    L    L++ +Q
Sbjct: 480 DYLHSRNIIYRDLKPENLLLDSQ 502


>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 19.8 bits (39), Expect = 9.4
 Identities = 13/46 (28%), Positives = 18/46 (39%)
 Frame = +1

Query: 25  YWRLSRSATCERFIPLTTSTTGQP*AMPLTKLLCSFLRKRIHHRRT 162
           Y+ +  +A   R   L +  TG P A    KL        IH+  T
Sbjct: 121 YYIIEVNARLSRSSALASKATGYPLAYVAAKLALGVRLPDIHNSVT 166


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 19.8 bits (39), Expect = 9.4
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = -2

Query: 238 RLPSPAPALYRSISIITPNGEDTT 167
           R  SP+P +       TPNG  +T
Sbjct: 111 RSASPSPGMGHMGHTPTPNGHPST 134


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,882
Number of Sequences: 438
Number of extensions: 1697
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7715466
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)