Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0007_H04
(349 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF025467-10|AAB71040.2| 154|Caenorhabditis elegans He1 homologu... 46 6e-06
Z22179-5|CAA80162.2| 786|Caenorhabditis elegans Hypothetical pr... 34 0.024
AF016680-2|AAB66164.2| 253|Caenorhabditis elegans Hypothetical ... 30 0.40
Z32679-3|CAA83596.1| 401|Caenorhabditis elegans Hypothetical pr... 29 1.2
Z99280-5|CAB16501.2| 413|Caenorhabditis elegans Hypothetical pr... 28 2.1
AL161712-11|CAC70135.1| 2870|Caenorhabditis elegans Hypothetical... 28 2.1
AL021469-2|CAA16289.2| 92|Caenorhabditis elegans Hypothetical ... 27 2.8
U64856-6|AAB04989.1| 406|Caenorhabditis elegans Hypothetical pr... 27 4.9
U64856-5|AAT81185.1| 301|Caenorhabditis elegans Hypothetical pr... 27 4.9
>AF025467-10|AAB71040.2| 154|Caenorhabditis elegans He1 homologue
protein 1 protein.
Length = 154
Score = 46.4 bits (105), Expect = 6e-06
Identities = 33/102 (32%), Positives = 51/102 (50%), Gaps = 8/102 (7%)
Frame = +2
Query: 68 NDGCSVNEVRIDPCNTNHK-----CVLKQGTVGRMTVNFTPNFDASKVKFGLYWDNGGD- 229
+DG +V++V+ D C K C+ K+G+ + + F P+ D K+K + GG
Sbjct: 27 SDG-TVSQVKADGCELTVKDGKKVCLFKKGSRPIIQIAFKPSKDTDKLKTSVRAKVGGSA 85
Query: 230 -VPFPDLQSDNACEY-TTCPLQAGQPKTLTYSLPIGKKVPKG 349
V FP SD AC Y CP+ AG+ + S+ I + P G
Sbjct: 86 MVDFPQTNSD-ACTYGVKCPVSAGENQIFEQSISITENHPAG 126
>Z22179-5|CAA80162.2| 786|Caenorhabditis elegans Hypothetical
protein F58A4.5 protein.
Length = 786
Score = 34.3 bits (75), Expect = 0.024
Identities = 15/53 (28%), Positives = 30/53 (56%)
Frame = +2
Query: 185 ASKVKFGLYWDNGGDVPFPDLQSDNACEYTTCPLQAGQPKTLTYSLPIGKKVP 343
AS +K + W+NGG++ F D+ + + Y + L +++P+G+K+P
Sbjct: 99 ASNLKCNIAWENGGEIEFNDMWAPES-RYYGVAIDKMSIGGLWHTVPVGQKLP 150
>AF016680-2|AAB66164.2| 253|Caenorhabditis elegans Hypothetical
protein R12A1.3 protein.
Length = 253
Score = 30.3 bits (65), Expect = 0.40
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +2
Query: 50 SCPGVSNDGCSVNEVRIDPCNTNHKCVLKQGTVGR 154
+CP +N G + D CN++ C+ ++ TVG+
Sbjct: 207 ACPADANSGLNCLFAHADACNSDKDCLGRENTVGQ 241
>Z32679-3|CAA83596.1| 401|Caenorhabditis elegans Hypothetical
protein C05B5.3 protein.
Length = 401
Score = 28.7 bits (61), Expect = 1.2
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = -1
Query: 169 EVNGHAPDRSLFQNAFVIRIARIDSDFVNRAAIIRNPRT--GLNFGHSLLG 23
++NG+ P S VI IAR SD + + + T G NFG+ G
Sbjct: 95 QINGNVPGSSSSNQQPVIYIARAGSDKYKNSEVTTSTPTPNGFNFGNGFQG 145
>Z99280-5|CAB16501.2| 413|Caenorhabditis elegans Hypothetical
protein Y57G11B.3 protein.
Length = 413
Score = 27.9 bits (59), Expect = 2.1
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +2
Query: 212 WDNGGDVPFPDLQSDNACEYTTCPLQAGQP 301
W NG VP PDL+++ TCP + P
Sbjct: 182 WTNGEMVPMPDLRAEMP---ATCPFKGNPP 208
>AL161712-11|CAC70135.1| 2870|Caenorhabditis elegans Hypothetical
protein Y66D12A.14 protein.
Length = 2870
Score = 27.9 bits (59), Expect = 2.1
Identities = 20/58 (34%), Positives = 28/58 (48%)
Frame = +2
Query: 176 NFDASKVKFGLYWDNGGDVPFPDLQSDNACEYTTCPLQAGQPKTLTYSLPIGKKVPKG 349
+F+ SK+K YW GG+ P P D+A +Q P T T + I K + KG
Sbjct: 2357 SFNISKIKNLAYWVVGGE-PLPQSLLDSALALGIKVIQNYGP-TETTAFAIAKHMKKG 2412
>AL021469-2|CAA16289.2| 92|Caenorhabditis elegans Hypothetical
protein Y116A8B.4 protein.
Length = 92
Score = 27.5 bits (58), Expect = 2.8
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +2
Query: 56 PGVSNDGCSVNEVRIDPCNTNHKCVLKQGTVGRMTVNFTP 175
PG SN+ N +I P + +++ TV R T + TP
Sbjct: 48 PGSSNESQRPNYYQIQPPSPGEMVIVRTTTVTRNTTSITP 87
>U64856-6|AAB04989.1| 406|Caenorhabditis elegans Hypothetical
protein T25F10.6a protein.
Length = 406
Score = 26.6 bits (56), Expect = 4.9
Identities = 21/72 (29%), Positives = 30/72 (41%)
Frame = +2
Query: 131 LKQGTVGRMTVNFTPNFDASKVKFGLYWDNGGDVPFPDLQSDNACEYTTCPLQAGQPKTL 310
LK T GR VNFTP+ S ++ + +G + E P+QAG K
Sbjct: 55 LKSPTPGRQQVNFTPSIPQSVLRKQQNYSSGKPSTIHTKEKLMRSE-GIIPIQAGSNKYA 113
Query: 311 TYSLPIGKKVPK 346
+ G VP+
Sbjct: 114 SQKGMTGFGVPR 125
>U64856-5|AAT81185.1| 301|Caenorhabditis elegans Hypothetical
protein T25F10.6b protein.
Length = 301
Score = 26.6 bits (56), Expect = 4.9
Identities = 21/72 (29%), Positives = 30/72 (41%)
Frame = +2
Query: 131 LKQGTVGRMTVNFTPNFDASKVKFGLYWDNGGDVPFPDLQSDNACEYTTCPLQAGQPKTL 310
LK T GR VNFTP+ S ++ + +G + E P+QAG K
Sbjct: 55 LKSPTPGRQQVNFTPSIPQSVLRKQQNYSSGKPSTIHTKEKLMRSE-GIIPIQAGSNKYA 113
Query: 311 TYSLPIGKKVPK 346
+ G VP+
Sbjct: 114 SQKGMTGFGVPR 125
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,395,348
Number of Sequences: 27780
Number of extensions: 207658
Number of successful extensions: 487
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 473
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 486
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 461821634
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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