Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0007_H04
         (349 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C prot...    25   0.34 
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    22   2.4  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    21   4.2  
L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein pro...    21   5.5  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    21   5.5  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              20   7.3  

>AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C
           protein.
          Length = 149

 Score = 24.6 bits (51), Expect = 0.34
 Identities = 10/27 (37%), Positives = 18/27 (66%)
 Frame = +2

Query: 179 FDASKVKFGLYWDNGGDVPFPDLQSDN 259
           F AS++  GL++ +G  + + DL+ DN
Sbjct: 89  FYASEIAIGLFFLHGRGIVYRDLKLDN 115


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 21.8 bits (44), Expect = 2.4
 Identities = 7/23 (30%), Positives = 14/23 (60%)
 Frame = +3

Query: 258 MPANTRLVPYRLGNPRHLRTPYP 326
           +P++  ++  ++GN   L  PYP
Sbjct: 90  VPSSLNVISEKIGNGGRLLQPYP 112


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 21.0 bits (42), Expect = 4.2
 Identities = 7/23 (30%), Positives = 14/23 (60%)
 Frame = +3

Query: 258 MPANTRLVPYRLGNPRHLRTPYP 326
           +P++  ++  ++GN   L  PYP
Sbjct: 87  VPSSLNVISNKIGNGGPLLEPYP 109


>L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein
           protein.
          Length = 81

 Score = 20.6 bits (41), Expect = 5.5
 Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 7/40 (17%)
 Frame = -2

Query: 171 VKLTVMRPTVPCFRTHL*-------FVLQGSIRTSLTEQP 73
           +K+ +   T+PC + HL        ++LQG IRT   E+P
Sbjct: 32  LKMHIRTHTLPC-KCHLCGKAFSRPWLLQGHIRTHTGEKP 70


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 20.6 bits (41), Expect = 5.5
 Identities = 7/23 (30%), Positives = 14/23 (60%)
 Frame = +3

Query: 258 MPANTRLVPYRLGNPRHLRTPYP 326
           +P++  ++  ++GN   L  PYP
Sbjct: 90  VPSSLNVISEKIGNGGCLLQPYP 112


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 20.2 bits (40), Expect = 7.3
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = -1

Query: 187 SIEIRCEVNGHAP 149
           ++EI+C+V G  P
Sbjct: 327 NVEIKCDVTGTPP 339


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,790
Number of Sequences: 438
Number of extensions: 2351
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  7936320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)