Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0007_G21
(546 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1565.08 |cdc48|SPAC6F12.01|AAA family ATPase Cdc48|Schizosac... 147 1e-36
SPCC965.04c |||mitochondrial inner membrane i-AAA protease compl... 69 3e-13
SPBC56F2.07c |||AAA family ATPase, unknown biological role|Schiz... 66 3e-12
SPBC16E9.10c |||AAA family ATPase Rix7 |Schizosaccharomyces pomb... 63 3e-11
SPAC3A11.12c |rpt5|pam2, tbp1|19S proteasome regulatory subunit ... 57 1e-09
SPCC1682.16 |rpt4||19S proteasome regulatory subunit Rpt4|Schizo... 56 3e-09
SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomy... 55 6e-09
SPBC23G7.12c |rpt6|let1|19S proteasome regulatory subunit Rpt6|S... 54 1e-08
SPAC17A5.01 |pex6||peroxin-6 |Schizosaccharomyces pombe|chr 1|||... 53 3e-08
SPBC543.09 |||mitochondrial m-AAA protease|Schizosaccharomyces p... 52 7e-08
SPBC16C6.07c |rpt1||19S proteasome regulatory subunit Rpt1|Schiz... 50 2e-07
SPAC31G5.19 |||ATPase with bromodomain protein|Schizosaccharomyc... 50 2e-07
SPCC553.03 |pex1||AAA family ATPase Pex1 |Schizosaccharomyces po... 45 6e-06
SPBC4.07c |rpt2|mts2|19S proteasome regulatory subunit Rpt2|Schi... 45 8e-06
SPAC1834.11c |sec18||secretory pathway protein Sec18 |Schizosacc... 45 8e-06
SPAC2G11.06 |vps4||AAA family ATPase Vps4|Schizosaccharomyces po... 42 4e-05
SPBC947.01 |||AAA family ATPase, unknown biological role|Schizos... 40 2e-04
SPAC328.04 |||AAA family ATPase, unknown biological role|Schizos... 39 6e-04
SPCC576.10c |rpt3||19S proteasome regulatory subunit Rpt3|Schizo... 38 7e-04
SPAC3C7.01c ||SPAC732.03c|inositol polyphosphate phosphatase |Sc... 27 2.4
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 25 9.6
>SPAC1565.08 |cdc48|SPAC6F12.01|AAA family ATPase
Cdc48|Schizosaccharomyces pombe|chr 1|||Manual
Length = 815
Score = 147 bits (356), Expect = 1e-36
Identities = 75/142 (52%), Positives = 96/142 (67%)
Frame = +2
Query: 2 RPGRLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQGFSGADLTEICQRA 181
RPGRLDQLIY+PLPDE++R +IL+ LR +P+A+DVDL +AK T GFSGADL + QRA
Sbjct: 654 RPGRLDQLIYVPLPDEEARFSILQTQLRHTPVAEDVDLRAVAKATHGFSGADLEFVVQRA 713
Query: 182 CKLAIRQAIESEIRRERNRQQXXXXXXXXXXXXXXVPEISRAHFEEAMKFARRSVSDNDI 361
KLAI+ +IE +I+RE N V ++ R H EEAMK ARRSVSD ++
Sbjct: 714 VKLAIKDSIEEDIKRE-NETGEAPADDVVMDEDASVSQVQRHHVEEAMKMARRSVSDAEV 772
Query: 362 RKYEMFAQTLQQSRGFGTNFRF 427
R+YE +A L SRG T F+F
Sbjct: 773 RRYEAYAHQLLTSRGL-TGFQF 793
Score = 54.4 bits (125), Expect = 1e-08
Identities = 26/70 (37%), Positives = 39/70 (55%)
Frame = +2
Query: 2 RPGRLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQGFSGADLTEICQRA 181
R GR D+ + + +PD R ILR + + +A DVDL IA T G+ G+DL +C A
Sbjct: 379 RFGRFDREVDVGIPDPTGRLEILRIHTKNMKLADDVDLEQIAAETHGYVGSDLASLCSEA 438
Query: 182 CKLAIRQAIE 211
IR+ ++
Sbjct: 439 AMQQIREKMD 448
>SPCC965.04c |||mitochondrial inner membrane i-AAA protease complex
subunit Yme1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 709
Score = 69.3 bits (162), Expect = 3e-13
Identities = 33/64 (51%), Positives = 43/64 (67%)
Frame = +2
Query: 2 RPGRLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQGFSGADLTEICQRA 181
RPGR D+ I++PLPD + R AIL + R P+ KDVDLS IA+ T GF+GADL + +A
Sbjct: 425 RPGRFDRHIHVPLPDVRGRLAILLQHTRHVPLGKDVDLSIIARGTSGFAGADLANLINQA 484
Query: 182 CKLA 193
A
Sbjct: 485 AVYA 488
>SPBC56F2.07c |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 809
Score = 66.1 bits (154), Expect = 3e-12
Identities = 29/72 (40%), Positives = 50/72 (69%)
Frame = +2
Query: 2 RPGRLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQGFSGADLTEICQRA 181
RPGRLD+L+Y+ P+ ++R+ I++ K A+DVDL IA+ T+G SGA++ +CQ A
Sbjct: 701 RPGRLDRLLYVGPPNFEARKQIVKIQAEKMKFAEDVDLDLIAEKTEGCSGAEVVALCQEA 760
Query: 182 CKLAIRQAIESE 217
+A+ + +E++
Sbjct: 761 GLIAMHEDLEAK 772
Score = 42.7 bits (96), Expect = 3e-05
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Frame = +2
Query: 2 RPGRLDQLIYIPLPDEKSREAILRANLRKSP-IAKDVDLSYIAKVTQGFSGADLTEICQR 178
RPGRL++ I I +PD+ +R I++ L P D L +A T + GADL + +
Sbjct: 434 RPGRLEKEIEIGIPDKSARLDIIKLLLSGVPNEINDAQLEDLASRTHAYVGADLAAVVRE 493
Query: 179 ACKLAIRQAI 208
A AI++ I
Sbjct: 494 AALRAIKRTI 503
>SPBC16E9.10c |||AAA family ATPase Rix7 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 779
Score = 62.9 bits (146), Expect = 3e-11
Identities = 40/130 (30%), Positives = 67/130 (51%), Gaps = 2/130 (1%)
Frame = +2
Query: 2 RPGRLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQ--GFSGADLTEICQ 175
RPGRLD+ + + LPD R IL+ +++P+ ++V+L + + + FSGADL + +
Sbjct: 647 RPGRLDKTLLVDLPDAHERVEILKTLTKQTPLHEEVNLDVLGRDERCSNFSGADLAALVR 706
Query: 176 RACKLAIRQAIESEIRRERNRQQXXXXXXXXXXXXXXVPEISRAHFEEAMKFARRSVSDN 355
A A+R A+ ++I N + ++ A FE A K + SVSD
Sbjct: 707 EAAVTALRSAVFADI--ASNEPEITQHSALEPI------RVTNADFELAFKNIKPSVSDR 758
Query: 356 DIRKYEMFAQ 385
D +KY+ A+
Sbjct: 759 DRQKYQRLAK 768
Score = 46.8 bits (106), Expect = 2e-06
Identities = 24/67 (35%), Positives = 38/67 (56%)
Frame = +2
Query: 2 RPGRLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQGFSGADLTEICQRA 181
R GR D+ I + +P + +RE ILR + ++ D D +AK T G+ GADL + A
Sbjct: 333 RAGRFDREICLTVPSQDAREKILRTMAKGLKLSGDFDFRQLAKQTPGYVGADLKALTAAA 392
Query: 182 CKLAIRQ 202
+AI++
Sbjct: 393 GIIAIKR 399
>SPAC3A11.12c |rpt5|pam2, tbp1|19S proteasome regulatory subunit
Rpt5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 438
Score = 57.2 bits (132), Expect = 1e-09
Identities = 29/76 (38%), Positives = 47/76 (61%)
Frame = +2
Query: 2 RPGRLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQGFSGADLTEICQRA 181
R GRLD+ + PLP+E++R ILR + RK I D++ +A+ T ++GA L +C A
Sbjct: 343 RSGRLDRKLEFPLPNEEARVGILRIHSRKMAIDDDINWEELARSTDEYNGAMLKSVCVEA 402
Query: 182 CKLAIRQAIESEIRRE 229
+A+RQ +++I E
Sbjct: 403 GMIALRQG-DTKINHE 417
>SPCC1682.16 |rpt4||19S proteasome regulatory subunit
Rpt4|Schizosaccharomyces pombe|chr 3|||Manual
Length = 388
Score = 56.4 bits (130), Expect = 3e-09
Identities = 28/67 (41%), Positives = 41/67 (61%)
Frame = +2
Query: 2 RPGRLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQGFSGADLTEICQRA 181
RPGRLD+ I IPLP+E R IL+ +L K ++D + K+T G +GADL + A
Sbjct: 290 RPGRLDRKIEIPLPNEVGRMEILKIHLEKVSKQGEIDYEALVKLTDGTNGADLRNVVTEA 349
Query: 182 CKLAIRQ 202
+AI++
Sbjct: 350 GFIAIKE 356
>SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1201
Score = 55.2 bits (127), Expect = 6e-09
Identities = 28/68 (41%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Frame = +2
Query: 2 RPGRLDQLIYIPLPDEKSREAILRAN-LRKSPIAKDVDLSYIAKVTQGFSGADLTEICQR 178
RPGR D+ Y PLP++++R IL N L SP + L ++A+ T G+ GADL +C
Sbjct: 532 RPGRFDREFYFPLPNKQARMKILEINSLHFSPKIPESYLLHLAESTSGYGGADLKALCTE 591
Query: 179 ACKLAIRQ 202
A A+R+
Sbjct: 592 AALNAVRR 599
>SPBC23G7.12c |rpt6|let1|19S proteasome regulatory subunit
Rpt6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 403
Score = 54.4 bits (125), Expect = 1e-08
Identities = 26/67 (38%), Positives = 39/67 (58%)
Frame = +2
Query: 2 RPGRLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQGFSGADLTEICQRA 181
RPGR+D+ I P P ++R ILR + R + + +DL IA+ G SGA+L +C A
Sbjct: 304 RPGRIDRKIEFPPPSAEARAEILRIHSRSMNLTRGIDLKSIAEKMNGASGAELKGVCTEA 363
Query: 182 CKLAIRQ 202
A+R+
Sbjct: 364 GMFALRE 370
>SPAC17A5.01 |pex6||peroxin-6 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 948
Score = 52.8 bits (121), Expect = 3e-08
Identities = 36/130 (27%), Positives = 65/130 (50%), Gaps = 5/130 (3%)
Frame = +2
Query: 2 RPGRLDQLIYIPL-PDEKSREAILRANLRKSPIAKDVDLSYIAK-VTQGFSGADLTEICQ 175
RPGR D+L+Y+ + E+S+ ++LRA + + + +DL+ IAK F+GAD+ +C
Sbjct: 813 RPGRFDKLVYLGINKSEESKASMLRALTKTFKLDETIDLNEIAKNCHPNFTGADMYALCS 872
Query: 176 RACKLAIRQ---AIESEIRRERNRQQXXXXXXXXXXXXXXVPEISRAHFEEAMKFARRSV 346
A AI++ I+ I+ I++ F ++K R S+
Sbjct: 873 DAVLSAIKRKTNEIDLLIQASGTDLSTEEFFKRNENQDSLELRITKEDFLTSLKKLRPSI 932
Query: 347 SDNDIRKYEM 376
S+ ++ +YEM
Sbjct: 933 SEQELHRYEM 942
>SPBC543.09 |||mitochondrial m-AAA protease|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 773
Score = 51.6 bits (118), Expect = 7e-08
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
Frame = +2
Query: 2 RPGRLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDL--SYIAKVTQGFSGADLTEICQ 175
RPGR D+ I I PD RE I + +L+ A ++DL +A +T GF+GAD+ +C
Sbjct: 454 RPGRFDRQITIDRPDIGGREQIFKVHLKHIKAADNIDLIAKRLAVLTSGFTGADIMNVCN 513
Query: 176 RACKLAIR 199
+A R
Sbjct: 514 EGALIAAR 521
>SPBC16C6.07c |rpt1||19S proteasome regulatory subunit
Rpt1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 438
Score = 50.4 bits (115), Expect = 2e-07
Identities = 25/66 (37%), Positives = 37/66 (56%)
Frame = +2
Query: 2 RPGRLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQGFSGADLTEICQRA 181
RPGR+D+ + LPD + R ILR + + I KD+ IA++ +GA+L +C A
Sbjct: 337 RPGRIDRKVEFGLPDLEGRAHILRIHAKSMAIDKDIRWELIARLCPSQTGAELRSVCTEA 396
Query: 182 CKLAIR 199
AIR
Sbjct: 397 GMFAIR 402
>SPAC31G5.19 |||ATPase with bromodomain protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1190
Score = 50.4 bits (115), Expect = 2e-07
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Frame = +2
Query: 2 RPGRLDQLIYIPLPDEKSREAILRANLRK-SPIAKDVDLSYIAKVTQGFSGADLTEICQR 178
RPGR D+ Y PLPD +R+ I+ + R P + S +A+ ++G+ GADL +C
Sbjct: 426 RPGRFDREFYFPLPDRDARKKIIEIHTRNWDPPVPEWLCSMLAEKSKGYGGADLRALCTE 485
Query: 179 ACKLAIRQAIESEIRRERNRQ 241
A +I++ R + Q
Sbjct: 486 AALNSIKRTYPQLYRSTKRLQ 506
>SPCC553.03 |pex1||AAA family ATPase Pex1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 937
Score = 45.2 bits (102), Expect = 6e-06
Identities = 22/70 (31%), Positives = 41/70 (58%)
Frame = +2
Query: 2 RPGRLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQGFSGADLTEICQRA 181
RPGRLD+LI+ LP+E+ R +L+ + I L ++ +T G++ ADL+ + A
Sbjct: 761 RPGRLDKLIFCDLPNEEERLEVLQKLANRFHIENAAMLKKLSTLTDGYTYADLSSLLYDA 820
Query: 182 CKLAIRQAIE 211
+A+ + ++
Sbjct: 821 HLIAVHKLLK 830
>SPBC4.07c |rpt2|mts2|19S proteasome regulatory subunit
Rpt2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 448
Score = 44.8 bits (101), Expect = 8e-06
Identities = 22/67 (32%), Positives = 36/67 (53%)
Frame = +2
Query: 2 RPGRLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQGFSGADLTEICQRA 181
RPGR+D+ I PDE ++ I + K + +DV+L + + SGA++ I A
Sbjct: 350 RPGRIDRKILFENPDEATKRKIFTIHTSKMNLGEDVNLEELIQCKDDLSGAEIKAIVSEA 409
Query: 182 CKLAIRQ 202
LA+R+
Sbjct: 410 GLLALRE 416
>SPAC1834.11c |sec18||secretory pathway protein Sec18
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 792
Score = 44.8 bits (101), Expect = 8e-06
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 4/74 (5%)
Frame = +2
Query: 2 RPGRLDQLIYIPLPDEKSREAILRANLRKSP----IAKDVDLSYIAKVTQGFSGADLTEI 169
RPGRL+ + I LPDE R IL+ + + + DVD+ +A +T+ FSGA++ +
Sbjct: 436 RPGRLEVHMEISLPDEHGRLQILKIHTSRMASNGILENDVDMEELASLTKNFSGAEIAGL 495
Query: 170 CQRACKLAIRQAIE 211
+ A A + I+
Sbjct: 496 IKSASSFAFYRHIK 509
>SPAC2G11.06 |vps4||AAA family ATPase Vps4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 432
Score = 42.3 bits (95), Expect = 4e-05
Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Frame = +2
Query: 11 RLDQLIYIPLPDEKSREAILRANLRKSPI-AKDVDLSYIAKVTQGFSGADLTEICQRACK 187
R ++ IYIPLP+ +R + N+ K P D +AK+T G+SG+D++ + + A
Sbjct: 285 RFEKRIYIPLPNAHARARMFELNVGKIPSELTSQDFKELAKMTDGYSGSDISIVVRDAIM 344
Query: 188 LAIRQ 202
+R+
Sbjct: 345 EPVRR 349
>SPBC947.01 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 660
Score = 40.3 bits (90), Expect = 2e-04
Identities = 30/116 (25%), Positives = 53/116 (45%), Gaps = 1/116 (0%)
Frame = +2
Query: 29 YIPLPDEKSREAILRANLRKSP-IAKDVDLSYIAKVTQGFSGADLTEICQRACKLAIRQA 205
YIPLP++++R L L + DL + +T+G+SG+D+T + + A +R
Sbjct: 551 YIPLPEKETRYKHLSHLLHNQVHCLTEEDLEELVNLTEGYSGSDITALAKDAAMGPLRNL 610
Query: 206 IESEIRRERNRQQXXXXXXXXXXXXXXVPEISRAHFEEAMKFARRSVSDNDIRKYE 373
++ + +P IS HF+ +++ R SVS I +YE
Sbjct: 611 GDALL----------------TTSAEMIPPISLNHFKASLRTIRPSVSQEGIHRYE 650
>SPAC328.04 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 741
Score = 38.7 bits (86), Expect = 6e-04
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = +2
Query: 29 YIPLPDEKSREAILRANLRKSPIAKDV-DLSYIAKVTQGFSGADLTEICQRACKLAIRQA 205
YIPLPDE +R L L+ + + D+ I K T+ +SG+DLT + + A +R
Sbjct: 631 YIPLPDETTRRLHLNNLLKYQKHSLSLEDIEAIVKATEYYSGSDLTALAKDAAMGPLRSL 690
Query: 206 IES 214
ES
Sbjct: 691 GES 693
>SPCC576.10c |rpt3||19S proteasome regulatory subunit
Rpt3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 389
Score = 38.3 bits (85), Expect = 7e-04
Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = +2
Query: 2 RPGRLDQLIYIP-LPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQGFSGADLTEICQR 178
RPGRLD+ I P D + R + + K ++ +VDL SGA + I Q
Sbjct: 292 RPGRLDRKIEFPSYRDRRQRRLVFQTITAKMLLSPEVDLDTFIMRPDASSGAQIAAIMQD 351
Query: 179 ACKLAIRQA 205
A LA+R++
Sbjct: 352 AGLLAVRKS 360
>SPAC3C7.01c ||SPAC732.03c|inositol polyphosphate phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 611
Score = 26.6 bits (56), Expect = 2.4
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +2
Query: 17 DQLIYIPLPDEKSREAILRANLRK-SPIAKDVDLSYI 124
D L+ + L D+K REA LR+ K K+ LSY+
Sbjct: 303 DNLVVVNLLDQKGREAPLRSGFEKLCKRNKNPPLSYV 339
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 24.6 bits (51), Expect = 9.6
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +3
Query: 342 PSPTTTYANTKCSPKHCNRAADSGPTSD 425
P PTT+ +NT SP N A + P++D
Sbjct: 231 PRPTTSASNTNTSP--ANGAPTNKPSTD 256
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,684,087
Number of Sequences: 5004
Number of extensions: 26474
Number of successful extensions: 110
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 94
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 99
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 225926624
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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