Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0007_G19
(465 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_10010| Best HMM Match : HLH (HMM E-Value=8.5e-09) 52 2e-07
SB_30776| Best HMM Match : HLH (HMM E-Value=1.7e-13) 43 1e-04
SB_40771| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 6e-04
SB_20446| Best HMM Match : HLH (HMM E-Value=1.26117e-44) 39 0.002
SB_9980| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.022
SB_25662| Best HMM Match : HLH (HMM E-Value=2.3e-14) 34 0.050
SB_15721| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.12
SB_59476| Best HMM Match : HLH (HMM E-Value=1.2e-15) 32 0.20
SB_25442| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.20
SB_27282| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.36
SB_38739| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.47
SB_5702| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.47
SB_49233| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.62
SB_43750| Best HMM Match : NAP (HMM E-Value=3.3) 30 0.82
SB_44231| Best HMM Match : Ion_trans_2 (HMM E-Value=6.5e-09) 30 1.1
SB_23535| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.1
SB_22651| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.1
SB_7044| Best HMM Match : PAN (HMM E-Value=1.3e-07) 30 1.1
SB_7690| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.4
SB_1992| Best HMM Match : Geminin (HMM E-Value=0.0018) 29 1.4
SB_899| Best HMM Match : Alpha_L_fucos (HMM E-Value=0) 29 1.4
SB_54715| Best HMM Match : Hexapep (HMM E-Value=1.2e-05) 29 1.9
SB_41073| Best HMM Match : GRP (HMM E-Value=2.8) 29 1.9
SB_45809| Best HMM Match : Vicilin_N (HMM E-Value=4.5) 29 1.9
SB_39750| Best HMM Match : Borrelia_orfA (HMM E-Value=1.1) 29 2.5
SB_38740| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_36889| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.3
SB_26233| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.3
SB_45371| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.3
SB_16794| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.4
SB_42248| Best HMM Match : Keratin_B2 (HMM E-Value=4.4) 28 4.4
SB_28695| Best HMM Match : Ras (HMM E-Value=0) 28 4.4
SB_12754| Best HMM Match : Vicilin_N (HMM E-Value=0.49) 28 4.4
SB_53398| Best HMM Match : RVT_1 (HMM E-Value=7.8e-12) 27 5.8
SB_2026| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.8
SB_35674| Best HMM Match : SH2 (HMM E-Value=0) 27 5.8
SB_4905| Best HMM Match : Mito_carr (HMM E-Value=3.3e-13) 27 5.8
SB_59802| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.7
SB_56230| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.7
SB_55724| Best HMM Match : SURF6 (HMM E-Value=0.62) 27 7.7
SB_36160| Best HMM Match : TFIIF_alpha (HMM E-Value=0) 27 7.7
SB_13005| Best HMM Match : PSI (HMM E-Value=2.9e-11) 27 7.7
>SB_10010| Best HMM Match : HLH (HMM E-Value=8.5e-09)
Length = 227
Score = 52.0 bits (119), Expect = 2e-07
Identities = 28/53 (52%), Positives = 34/53 (64%)
Frame = +1
Query: 295 FKERRREAHTQAEQKRRDAIKKGYDSLQELVPTCQQTDASGYKHSKAAVLQKS 453
+KE RR +H AEQKRR IK G+D L +VPT +S K SKA VLQK+
Sbjct: 16 YKEHRRMSHISAEQKRRCNIKMGFDQLASMVPTLASQKSS--KVSKATVLQKN 66
>SB_30776| Best HMM Match : HLH (HMM E-Value=1.7e-13)
Length = 1217
Score = 43.2 bits (97), Expect = 1e-04
Identities = 27/79 (34%), Positives = 41/79 (51%)
Frame = +1
Query: 229 SSSNQNTEDEDDSGDNKASALSFKERRREAHTQAEQKRRDAIKKGYDSLQELVPTCQQTD 408
S +N T S + ++ + RRR H + E++R+D I L E+VP C
Sbjct: 112 SPTNNKTPYYISSDIVLSGGIAQQTRRRIVHNEVERRRKDKINNWITKLAEVVPDC---- 167
Query: 409 ASGYKHSKAAVLQKSIDYI 465
A G K SK VL+KS++Y+
Sbjct: 168 ARG-KQSKNIVLEKSVEYL 185
>SB_40771| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 553
Score = 40.7 bits (91), Expect = 6e-04
Identities = 23/82 (28%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Frame = +1
Query: 223 TPSSSNQNTEDEDDSGDNKASAL-SFKERRREAHTQAEQKRRDAIKKGYDSLQELVPTCQ 399
TP S+ + + + + ++ S S R+EAH + E+KRR+ I + + L+ ++P+C
Sbjct: 452 TPRSTKRKRDSINSAVNHSTSKTPSTPAERKEAHLEKERKRRERIARSWFLLRSMIPSCS 511
Query: 400 QTDASGYKHSKAAVLQKSIDYI 465
T KA V + ++ YI
Sbjct: 512 DT------ADKATVFEMTVAYI 527
>SB_20446| Best HMM Match : HLH (HMM E-Value=1.26117e-44)
Length = 424
Score = 39.1 bits (87), Expect = 0.002
Identities = 21/56 (37%), Positives = 33/56 (58%)
Frame = +1
Query: 298 KERRREAHTQAEQKRRDAIKKGYDSLQELVPTCQQTDASGYKHSKAAVLQKSIDYI 465
K RRE E++R +I G+ +L+ L+P + G K SKAA+LQ++ +YI
Sbjct: 41 KRLRREIANSNERRRMQSINSGFQALRMLIP-----NTEGEKLSKAAILQQTSEYI 91
Score = 39.1 bits (87), Expect = 0.002
Identities = 21/56 (37%), Positives = 33/56 (58%)
Frame = +1
Query: 298 KERRREAHTQAEQKRRDAIKKGYDSLQELVPTCQQTDASGYKHSKAAVLQKSIDYI 465
K RRE E++R +I G+ +L+ L+P + G K SKAA+LQ++ +YI
Sbjct: 208 KRLRREIANSNERRRMQSINSGFQALRMLIP-----NTEGEKLSKAAILQQTSEYI 258
>SB_9980| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 61
Score = 35.5 bits (78), Expect = 0.022
Identities = 17/25 (68%), Positives = 20/25 (80%)
Frame = +1
Query: 283 SALSFKERRREAHTQAEQKRRDAIK 357
S+ S K+ RR AH+ AEQKRRDAIK
Sbjct: 34 SSSSSKQNRRFAHSVAEQKRRDAIK 58
>SB_25662| Best HMM Match : HLH (HMM E-Value=2.3e-14)
Length = 468
Score = 34.3 bits (75), Expect = 0.050
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = +1
Query: 304 RRREAHTQAEQKRRDAIKKGYDSLQELVPTCQQTDASGYKHSKAAVLQKSIDYI 465
RRR ++E++RRD + L +VP C +S K K VLQ +++Y+
Sbjct: 137 RRRTTRNESEKRRRDKLNVYITELAAMVPMCA---SSRKKLDKTTVLQMAVNYM 187
>SB_15721| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 295
Score = 33.1 bits (72), Expect = 0.12
Identities = 19/68 (27%), Positives = 36/68 (52%)
Frame = +1
Query: 262 DSGDNKASALSFKERRREAHTQAEQKRRDAIKKGYDSLQELVPTCQQTDASGYKHSKAAV 441
DSGD+K K ++ H++ E++RRD + + L ++P C +A K K V
Sbjct: 172 DSGDSKGFQ---KGAIKQNHSEIEKRRRDKMNTYINELSTMIPMC---NAMSRKLDKLTV 225
Query: 442 LQKSIDYI 465
L+ ++ ++
Sbjct: 226 LRMAVQHM 233
>SB_59476| Best HMM Match : HLH (HMM E-Value=1.2e-15)
Length = 272
Score = 32.3 bits (70), Expect = 0.20
Identities = 17/53 (32%), Positives = 29/53 (54%)
Frame = +1
Query: 307 RREAHTQAEQKRRDAIKKGYDSLQELVPTCQQTDASGYKHSKAAVLQKSIDYI 465
R+ E+KRRD I + L+ LVPT + + S K KA +L +++++
Sbjct: 12 RKRRRGLIEKKRRDRINRCLVELRRLVPTALEKEGSS-KLEKAEILHLTVEHL 63
>SB_25442| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1010
Score = 32.3 bits (70), Expect = 0.20
Identities = 15/52 (28%), Positives = 30/52 (57%)
Frame = +1
Query: 310 REAHTQAEQKRRDAIKKGYDSLQELVPTCQQTDASGYKHSKAAVLQKSIDYI 465
RE H++ E++RR+ + + L ++VP+C K K VL+ +++Y+
Sbjct: 14 RENHSEIERRRRNKMNAYINELSDMVPSC---TGLARKPDKLTVLRMAVNYM 62
>SB_27282| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 644
Score = 31.5 bits (68), Expect = 0.36
Identities = 14/23 (60%), Positives = 18/23 (78%), Gaps = 1/23 (4%)
Frame = +1
Query: 223 TPSSS-NQNTEDEDDSGDNKASA 288
TPSSS N +T+D+DD DNK +A
Sbjct: 494 TPSSSDNDDTQDDDDKSDNKPNA 516
Score = 27.9 bits (59), Expect = 4.4
Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Frame = +1
Query: 157 ITDICN--MYSRCGSSGSIQNIHQTPSSS-NQNTEDEDDSGDNKASA 288
I DIC+ R IQ PSSS N +T+D+DD D + SA
Sbjct: 371 ILDICSEVFLIRNTREKGIQPSSDGPSSSDNDDTQDDDDKSDFQPSA 417
Score = 27.9 bits (59), Expect = 4.4
Identities = 12/23 (52%), Positives = 18/23 (78%), Gaps = 1/23 (4%)
Frame = +1
Query: 223 TPSSSN-QNTEDEDDSGDNKASA 288
TPSSS+ +T+D+D+ DNK +A
Sbjct: 560 TPSSSDGDDTQDDDEKSDNKPNA 582
>SB_38739| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 213
Score = 31.1 bits (67), Expect = 0.47
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = +1
Query: 262 DSGDNKASALSFKERRREAHTQAEQKRRDAIKKGYDSLQELVPTCQQTDASGYKH-SKAA 438
DS D + LS +RR+ E+ RR I + L+ LV DAS Y KA
Sbjct: 7 DSSDYVSKILS--DRRKAKKPMMEKLRRARINDSLNELKVLVLELLNKDASRYSKMEKAD 64
Query: 439 VLQKSIDYI 465
+L+ ++ Y+
Sbjct: 65 ILEMTVGYL 73
>SB_5702| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 217
Score = 31.1 bits (67), Expect = 0.47
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +1
Query: 190 GSSGSIQNIHQTPSSSNQNTEDEDDSGDNKASALSFKERRREAHTQAEQ 336
G S SI +Q P Q+ +D +D D+ A+ SF+ +AH A Q
Sbjct: 2 GHSASIAKKYQAPK---QHVDDTNDEVDSLATVSSFRPTSPDAHNDARQ 47
>SB_49233| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 309
Score = 30.7 bits (66), Expect = 0.62
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1
Query: 196 SGSIQNIHQTPSSSNQNTEDEDDSGDNKA 282
SG+++ QTPS +N NT DSG A
Sbjct: 4 SGALKEEQQTPSDTNNNTNGSSDSGGGGA 32
>SB_43750| Best HMM Match : NAP (HMM E-Value=3.3)
Length = 514
Score = 30.3 bits (65), Expect = 0.82
Identities = 17/58 (29%), Positives = 31/58 (53%)
Frame = +1
Query: 187 CGSSGSIQNIHQTPSSSNQNTEDEDDSGDNKASALSFKERRREAHTQAEQKRRDAIKK 360
CGSSG + + P+ + E+ + S + + +R+RE Q EQ+R+ A++K
Sbjct: 437 CGSSGRKKRQAEMPAPVSTVQEETERSINMCPPGIWVCDRKRELKRQREQRRQAAMEK 494
>SB_44231| Best HMM Match : Ion_trans_2 (HMM E-Value=6.5e-09)
Length = 441
Score = 29.9 bits (64), Expect = 1.1
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = +1
Query: 196 SGSIQNIHQTPSSSNQNTEDEDDSGDNKASALSFKERRREAHTQAEQKRRDA 351
S +++ HQ +S+ + + D A+ K+RR E QA +KR +A
Sbjct: 357 SSVVEDFHQNLTSTIERLRERHDQDMRNYIAILKKQRRNENKYQAYEKREEA 408
>SB_23535| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 222
Score = 29.9 bits (64), Expect = 1.1
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Frame = +1
Query: 220 QTPSSSNQNTEDEDDSGDNKASALSFKERRREAHTQAEQKRRDAIKKGYDSLQELVPTCQ 399
Q + + TE E+D D K S ++RRRE I + + L+ LV Q
Sbjct: 3 QDSAKDEKMTEAENDIDDRKWSKPVMEKRRRE-----------RINRSLEELKRLVLEAQ 51
Query: 400 QTDASGY-KHSKAAVLQKSIDYI 465
D S Y K KA +L+ ++ ++
Sbjct: 52 HRDCSRYTKLEKADILEMTVKHL 74
>SB_22651| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 950
Score = 29.9 bits (64), Expect = 1.1
Identities = 18/72 (25%), Positives = 30/72 (41%)
Frame = +1
Query: 217 HQTPSSSNQNTEDEDDSGDNKASALSFKERRREAHTQAEQKRRDAIKKGYDSLQELVPTC 396
++ P + ED+DD + S K R+ + E K+ KK + +E
Sbjct: 723 NKVPKVDKDDEEDDDDEEEESEEDESNKPSSRQVTAKKEDKKGKKKKKEEEEEEEEDQEE 782
Query: 397 QQTDASGYKHSK 432
+ D+SG K K
Sbjct: 783 EDEDSSGKKKGK 794
>SB_7044| Best HMM Match : PAN (HMM E-Value=1.3e-07)
Length = 564
Score = 29.9 bits (64), Expect = 1.1
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = -3
Query: 220 DGCFV*THCYHTESTCCIYQ*FIKLKT*NLIYCIKVRSIH 101
DG T C+H + CC Y+ I ++ + Y K+R +H
Sbjct: 418 DGVAQRTVCFHLDGECCRYKTQIYVRRCHGFYVYKLRELH 457
>SB_7690| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 430
Score = 29.5 bits (63), Expect = 1.4
Identities = 22/79 (27%), Positives = 38/79 (48%)
Frame = +1
Query: 229 SSSNQNTEDEDDSGDNKASALSFKERRREAHTQAEQKRRDAIKKGYDSLQELVPTCQQTD 408
S S + E E+DS E R H E+KRR+ +K + L++ VP + +
Sbjct: 332 SGSGDSDESENDS-----------EYTRATHNVLERKRRNDLKLKFQKLRDAVPELKDNE 380
Query: 409 ASGYKHSKAAVLQKSIDYI 465
+ K ++L+KS ++I
Sbjct: 381 ----RAPKVSILRKSWEHI 395
>SB_1992| Best HMM Match : Geminin (HMM E-Value=0.0018)
Length = 155
Score = 29.5 bits (63), Expect = 1.4
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = +1
Query: 193 SSGSIQNIHQTPSSSNQNTEDEDDSGDNKASALSFKERRREAHTQ-AEQKRRDAIKKGYD 369
SS S SSS Q T+D+ S ++A AL +E E++ Q ++RR A+++ +
Sbjct: 67 SSDSSDTESTKRSSSEQVTDDDKKSVSDEAFALMIQEPAPESYWQLLAEERRLALQETLE 126
Query: 370 SLQELV 387
Q +V
Sbjct: 127 ENQRMV 132
>SB_899| Best HMM Match : Alpha_L_fucos (HMM E-Value=0)
Length = 1127
Score = 29.5 bits (63), Expect = 1.4
Identities = 13/52 (25%), Positives = 27/52 (51%)
Frame = +1
Query: 226 PSSSNQNTEDEDDSGDNKASALSFKERRREAHTQAEQKRRDAIKKGYDSLQE 381
P + N+ D+DD D F+ + ++ ++ K+R + KKG++ Q+
Sbjct: 1038 PGAKNKKKHDDDDDDDEGGGDDKFEPKHKKKG-RSSSKKRHSRKKGHEEQQK 1088
>SB_54715| Best HMM Match : Hexapep (HMM E-Value=1.2e-05)
Length = 1143
Score = 29.1 bits (62), Expect = 1.9
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = +1
Query: 220 QTPSSSNQNTEDEDDSGDNKASALSFKERRREAHTQAEQKRRDAIKKGYDSLQE 381
+T S +T D D S D+ ++ S +ER + H + ++KR+ IKK E
Sbjct: 745 ETKKSRKYSTTDSDCSSDDGENSDSSRERSIKKH-KKKKKRKKKIKKNRKKTME 797
>SB_41073| Best HMM Match : GRP (HMM E-Value=2.8)
Length = 305
Score = 29.1 bits (62), Expect = 1.9
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +1
Query: 145 STL*ITDICNMYSRCGSSGSIQNIHQTPSSSNQNTEDEDDSGDN 276
S L + I +R G +G Q H+ ++N N D D+ DN
Sbjct: 9 SDLLLAGILVAEARKGGNGYFQTTHRELDNNNDNDNDNDNDNDN 52
>SB_45809| Best HMM Match : Vicilin_N (HMM E-Value=4.5)
Length = 215
Score = 29.1 bits (62), Expect = 1.9
Identities = 16/62 (25%), Positives = 34/62 (54%)
Frame = +1
Query: 247 TEDEDDSGDNKASALSFKERRREAHTQAEQKRRDAIKKGYDSLQELVPTCQQTDASGYKH 426
+ D DD K S+ S K+R R + +++ ++RR + + DS + + +++ +S +H
Sbjct: 5 SSDSDDDRRRKRSSKSSKKRDRRSRSRSRERRRRSKSRDRDS-RSRTSSRRRSRSSERRH 63
Query: 427 SK 432
K
Sbjct: 64 RK 65
>SB_39750| Best HMM Match : Borrelia_orfA (HMM E-Value=1.1)
Length = 810
Score = 28.7 bits (61), Expect = 2.5
Identities = 12/50 (24%), Positives = 24/50 (48%)
Frame = +1
Query: 226 PSSSNQNTEDEDDSGDNKASALSFKERRREAHTQAEQKRRDAIKKGYDSL 375
PSS + S NK S +SF + + E+++++ + K Y ++
Sbjct: 371 PSSKSHKKSSSKSSSSNKLSKISFLRKLMDGKILTEEQKKEELAKLYAAI 420
>SB_38740| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 270
Score = 28.7 bits (61), Expect = 2.5
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +1
Query: 301 ERRREAHTQAEQKRRDAIKKGYDSLQELVPTCQQTDASGY-KHSKAAVLQKSIDYI 465
+RRR E+ RR+ I L+ LV + D S Y + KA +L+ ++ YI
Sbjct: 21 KRRRIMKPITERLRRERINSSLKELKFLVLSALGQDVSRYSRMEKADILEMTVSYI 76
>SB_36889| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 302
Score = 28.3 bits (60), Expect = 3.3
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +2
Query: 209 KTSIKLRRLLIKIQKTKMTVEIIRHRHLVLKKGEEKLTPKQNRNEEMP 352
K +IKLRR+ +K +KT + V + + + EE L K R P
Sbjct: 213 KDAIKLRRVPLKAEKTPLEVPLEVGTEVYIAVNEEDLQAKGRRRATDP 260
>SB_26233| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 463
Score = 28.3 bits (60), Expect = 3.3
Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = +1
Query: 229 SSSNQNTEDEDDSGD-NKASALSFKERRREAHTQAEQKRRDAIKKGYDSLQELVPTCQQT 405
SS + +D D +G+ +K+ + S + E + E+K+ KKG Q+ P ++
Sbjct: 184 SSDSDGEDDRDGNGEQSKSGSESDDDEEEEEEEEKEEKKLTQKKKGKTPEQKKTPGTKKA 243
Query: 406 DASGYKH 426
AS +H
Sbjct: 244 -ASKQRH 249
>SB_45371| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 213
Score = 28.3 bits (60), Expect = 3.3
Identities = 16/54 (29%), Positives = 31/54 (57%)
Frame = +1
Query: 184 RCGSSGSIQNIHQTPSSSNQNTEDEDDSGDNKASALSFKERRREAHTQAEQKRR 345
R G SG + ++ +SN T+ +DDS D K ++R+++ ++ E+KR+
Sbjct: 89 RWGHSG-YKELYPEEFASNF-TDSDDDSEDEKKKKKKTSKKRKKSSSKDERKRK 140
>SB_16794| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1407
Score = 27.9 bits (59), Expect = 4.4
Identities = 15/70 (21%), Positives = 30/70 (42%)
Frame = +1
Query: 175 MYSRCGSSGSIQNIHQTPSSSNQNTEDEDDSGDNKASALSFKERRREAHTQAEQKRRDAI 354
M+ + SG + + ++ + Q E+E +K ++ + R + + K
Sbjct: 387 MFEKISRSGELADSYEKKKAEMQKAEEETSFNYHKKKGIAAERREAKQEKEEADKYNKWN 446
Query: 355 KKGYDSLQEL 384
+ DSLQEL
Sbjct: 447 QDLVDSLQEL 456
>SB_42248| Best HMM Match : Keratin_B2 (HMM E-Value=4.4)
Length = 736
Score = 27.9 bits (59), Expect = 4.4
Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = -3
Query: 220 DGCFV*TH-CYHTESTCCIYQ*FIKLK 143
DGC V CYH +CC + +IK++
Sbjct: 75 DGCLVTRKVCYHWSGSCCRWSNYIKVR 101
>SB_28695| Best HMM Match : Ras (HMM E-Value=0)
Length = 1058
Score = 27.9 bits (59), Expect = 4.4
Identities = 11/29 (37%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Frame = +1
Query: 190 GSSGSIQNIHQT-PSSSNQNTEDEDDSGD 273
G +G N+H++ P ++N +D+DD+GD
Sbjct: 783 GETGEEFNLHRSRPLIHDENDDDDDDNGD 811
>SB_12754| Best HMM Match : Vicilin_N (HMM E-Value=0.49)
Length = 440
Score = 27.9 bits (59), Expect = 4.4
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
Frame = +1
Query: 217 HQTPSSSN--QNTEDEDDSGDNKASALSFKERRR-EAHTQAEQKRRDAIKKGYDSLQELV 387
HQ SS+ + +E + +NKA L + + + H + + + IKK D QELV
Sbjct: 98 HQLRESSSKIEKLTEEKLTAENKAQGLQVELKTNLQRHEEKAKSLNEMIKKEIDKRQELV 157
Query: 388 PTCQ 399
Q
Sbjct: 158 NEMQ 161
>SB_53398| Best HMM Match : RVT_1 (HMM E-Value=7.8e-12)
Length = 924
Score = 27.5 bits (58), Expect = 5.8
Identities = 13/60 (21%), Positives = 32/60 (53%)
Frame = +2
Query: 188 VVAVGLYKTSIKLRRLLIKIQKTKMTVEIIRHRHLVLKKGEEKLTPKQNRNEEMPLRKDM 367
++A L + +++RL I++QK +TV + + + + + ++ NE+ L +D+
Sbjct: 626 IMAKPLSQAPCRIQRLPIRLQKYNITVRFVPGKEMFIADTLSRAFLIEDTNEQQDLNEDI 685
>SB_2026| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1789
Score = 27.5 bits (58), Expect = 5.8
Identities = 16/68 (23%), Positives = 30/68 (44%)
Frame = +1
Query: 205 IQNIHQTPSSSNQNTEDEDDSGDNKASALSFKERRREAHTQAEQKRRDAIKKGYDSLQEL 384
+++ + SN++ +D+S D A + + E T AE K+ + DS +
Sbjct: 1641 VEDDEKKADDSNEDIGKKDESRDQAEDAKKEESKTEEMETDAESKQEETGNATVDSTK-- 1698
Query: 385 VPTCQQTD 408
PT + D
Sbjct: 1699 -PTAEAKD 1705
>SB_35674| Best HMM Match : SH2 (HMM E-Value=0)
Length = 871
Score = 27.5 bits (58), Expect = 5.8
Identities = 16/68 (23%), Positives = 30/68 (44%)
Frame = +1
Query: 205 IQNIHQTPSSSNQNTEDEDDSGDNKASALSFKERRREAHTQAEQKRRDAIKKGYDSLQEL 384
+++ + SN++ +D+S D A + + E T AE K+ + DS +
Sbjct: 220 VEDDEKKADDSNEDIGKKDESRDQAEDAKKEESKTEEMETDAESKQEETGNATVDSTK-- 277
Query: 385 VPTCQQTD 408
PT + D
Sbjct: 278 -PTAEAKD 284
>SB_4905| Best HMM Match : Mito_carr (HMM E-Value=3.3e-13)
Length = 577
Score = 27.5 bits (58), Expect = 5.8
Identities = 11/31 (35%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = -1
Query: 327 LGVSFSSPFFKTKCRCLIIS-TVIFVFCILI 238
LGV+++ F CR L++S T++ + C L+
Sbjct: 309 LGVTYAGKFTMAHCRALLVSLTILILPCYLV 339
>SB_59802| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3213
Score = 27.1 bits (57), Expect = 7.7
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +1
Query: 298 KERRREAHTQAEQKRRDAIKKGYDSLQELVPTCQQTDASGYK 423
K + EA A + DAI + SL P+CQ+T S K
Sbjct: 1833 KHQTFEAEVSAHKSELDAITQTGQSLMRNSPSCQETVESRLK 1874
>SB_56230| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 996
Score = 27.1 bits (57), Expect = 7.7
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +1
Query: 178 YSRCGSSGSIQNIHQTPSSSNQNTEDEDDSGDN 276
YS S + + S S+ N +D+DD+GD+
Sbjct: 933 YSDSDSDSDSDSDSDSDSDSHHNNDDDDDNGDD 965
>SB_55724| Best HMM Match : SURF6 (HMM E-Value=0.62)
Length = 1105
Score = 27.1 bits (57), Expect = 7.7
Identities = 11/46 (23%), Positives = 20/46 (43%)
Frame = +1
Query: 211 NIHQTPSSSNQNTEDEDDSGDNKASALSFKERRREAHTQAEQKRRD 348
N H + S +++ T+D + + + +SF H A R D
Sbjct: 188 NTHSSLSDTSEKTKDRQQTSAKQGNTMSFSSIDNSKHGHANTTRED 233
>SB_36160| Best HMM Match : TFIIF_alpha (HMM E-Value=0)
Length = 603
Score = 27.1 bits (57), Expect = 7.7
Identities = 16/75 (21%), Positives = 29/75 (38%)
Frame = +1
Query: 157 ITDICNMYSRCGSSGSIQNIHQTPSSSNQNTEDEDDSGDNKASALSFKERRREAHTQAEQ 336
+ D + ++ S S IH + +D++D DN+ KE++ + +
Sbjct: 221 VEDSSDSKAKLTSLASSMKIHDNDDLDLSDDDDDNDDDDNEDDNSVKKEKKTGQQNKKKG 280
Query: 337 KRRDAIKKGYDSLQE 381
K KK D E
Sbjct: 281 KSASKAKKNSDDESE 295
>SB_13005| Best HMM Match : PSI (HMM E-Value=2.9e-11)
Length = 829
Score = 27.1 bits (57), Expect = 7.7
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -1
Query: 348 ISSFLFCLGVSFSS 307
ISSFLFC+G S SS
Sbjct: 86 ISSFLFCIGTSISS 99
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,349,830
Number of Sequences: 59808
Number of extensions: 265363
Number of successful extensions: 1510
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 1281
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1466
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 957531822
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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