Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0007_G18
         (202 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          23   0.35 
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      19   4.3  
DQ026036-1|AAY87895.1|  529|Apis mellifera nicotinic acetylcholi...    19   4.3  
DQ026035-1|AAY87894.1|  529|Apis mellifera nicotinic acetylcholi...    19   4.3  
L01588-1|AAA27735.1|   74|Apis mellifera zinc finger protein pro...    18   9.8  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    18   9.8  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    18   9.8  

>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 23.0 bits (47), Expect = 0.35
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -3

Query: 176 LNYYIRNLGLCSAGTFVNRL*TFW 105
           LNY+I ++GL +   F+ +   FW
Sbjct: 220 LNYFIEDIGLNTYYFFLRQAFPFW 243


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 19.4 bits (38), Expect = 4.3
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -3

Query: 176 LNYYIRNLGLCSAGTFVNRL*TFW 105
           L Y+I ++GL +   F+ +   FW
Sbjct: 220 LIYFIEDIGLNTYYFFLRQAFPFW 243


>DQ026036-1|AAY87895.1|  529|Apis mellifera nicotinic
          acetylcholine receptor alpha6subunit protein.
          Length = 529

 Score = 19.4 bits (38), Expect = 4.3
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = +3

Query: 27 STMSKCVILLVIFIVHTVI 83
          S +S CVI  V+F++ + +
Sbjct: 11 SDVSSCVIFGVLFVLFSFL 29


>DQ026035-1|AAY87894.1|  529|Apis mellifera nicotinic
          acetylcholine receptor alpha6subunit protein.
          Length = 529

 Score = 19.4 bits (38), Expect = 4.3
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = +3

Query: 27 STMSKCVILLVIFIVHTVI 83
          S +S CVI  V+F++ + +
Sbjct: 11 SDVSSCVIFGVLFVLFSFL 29


>L01588-1|AAA27735.1|   74|Apis mellifera zinc finger protein
          protein.
          Length = 74

 Score = 18.2 bits (35), Expect = 9.8
 Identities = 4/6 (66%), Positives = 6/6 (100%)
 Frame = +2

Query: 62 FHCSYC 79
          +HCS+C
Sbjct: 38 YHCSHC 43


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 18.2 bits (35), Expect = 9.8
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +1

Query: 85  AVLKNPHQNVYNRL 126
           A + +P+QNVY  L
Sbjct: 351 ASILSPNQNVYGDL 364


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 18.2 bits (35), Expect = 9.8
 Identities = 5/15 (33%), Positives = 10/15 (66%)
 Frame = -3

Query: 47  YTLRHGRRLGKKLKI 3
           + +RHGRR  + + +
Sbjct: 82  HPIRHGRRQSRSMDL 96


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,194
Number of Sequences: 438
Number of extensions: 707
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 45
effective length of database: 126,633
effective search space used:  2659293
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)