Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0007_G15
(431 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U88176-2|AAO91740.3| 550|Caenorhabditis elegans Hypothetical pr... 29 1.1
Z82078-9|CAE11308.1| 949|Caenorhabditis elegans Hypothetical pr... 29 1.9
Z82078-8|CAB04948.2| 947|Caenorhabditis elegans Hypothetical pr... 29 1.9
AL023844-13|CAE11312.1| 949|Caenorhabditis elegans Hypothetical... 29 1.9
AL023844-12|CAA19535.2| 947|Caenorhabditis elegans Hypothetical... 29 1.9
AF047657-7|AAK18943.1| 424|Caenorhabditis elegans Hypothetical ... 28 3.3
Z98866-1|CAB11558.1| 416|Caenorhabditis elegans Hypothetical pr... 27 4.4
U41993-4|AAA83446.4| 574|Caenorhabditis elegans Hypothetical pr... 27 5.8
U23523-5|AAC46556.1| 77|Caenorhabditis elegans Hypothetical pr... 27 5.8
>U88176-2|AAO91740.3| 550|Caenorhabditis elegans Hypothetical
protein F18F11.4 protein.
Length = 550
Score = 29.5 bits (63), Expect = 1.1
Identities = 18/70 (25%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Frame = +2
Query: 227 MVVIDWRKGVRRSLSEDDKYSYFTEDVDLNTYMYYLHMN--YPYWMTDEVYGLNKERQGE 400
+V D R LSED + + T ++ + +YYLH+ + + V N
Sbjct: 384 VVHFDMHSVYRNELSEDKTHQHTTIEIYDSLNLYYLHLRRFERHLLNPPVVKYNNRFNSS 443
Query: 401 ILMYANSQLL 430
+LM N+++L
Sbjct: 444 LLMKLNTKML 453
>Z82078-9|CAE11308.1| 949|Caenorhabditis elegans Hypothetical protein
Y48A6B.11b protein.
Length = 949
Score = 28.7 bits (61), Expect = 1.9
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +2
Query: 236 IDWRKGVRRSLSEDDKYSYFTEDVDLNTY-MYYLHMNYPYWMTDEVYGLNKERQGEILM 409
+D+R VRR L + +K Y + V + Y + N +EVY KE+ G++++
Sbjct: 881 LDYRYDVRRGLPDAEKQKYQWQQVQMTVIAARYANKNL-INEANEVYATEKEKLGQMVL 938
>Z82078-8|CAB04948.2| 947|Caenorhabditis elegans Hypothetical protein
Y48A6B.11a protein.
Length = 947
Score = 28.7 bits (61), Expect = 1.9
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +2
Query: 236 IDWRKGVRRSLSEDDKYSYFTEDVDLNTY-MYYLHMNYPYWMTDEVYGLNKERQGEILM 409
+D+R VRR L + +K Y + V + Y + N +EVY KE+ G++++
Sbjct: 879 LDYRYDVRRGLPDAEKQKYQWQQVQMTVIAARYANKNL-INEANEVYATEKEKLGQMVL 936
>AL023844-13|CAE11312.1| 949|Caenorhabditis elegans Hypothetical
protein Y48A6B.11b protein.
Length = 949
Score = 28.7 bits (61), Expect = 1.9
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +2
Query: 236 IDWRKGVRRSLSEDDKYSYFTEDVDLNTY-MYYLHMNYPYWMTDEVYGLNKERQGEILM 409
+D+R VRR L + +K Y + V + Y + N +EVY KE+ G++++
Sbjct: 881 LDYRYDVRRGLPDAEKQKYQWQQVQMTVIAARYANKNL-INEANEVYATEKEKLGQMVL 938
>AL023844-12|CAA19535.2| 947|Caenorhabditis elegans Hypothetical
protein Y48A6B.11a protein.
Length = 947
Score = 28.7 bits (61), Expect = 1.9
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +2
Query: 236 IDWRKGVRRSLSEDDKYSYFTEDVDLNTY-MYYLHMNYPYWMTDEVYGLNKERQGEILM 409
+D+R VRR L + +K Y + V + Y + N +EVY KE+ G++++
Sbjct: 879 LDYRYDVRRGLPDAEKQKYQWQQVQMTVIAARYANKNL-INEANEVYATEKEKLGQMVL 936
>AF047657-7|AAK18943.1| 424|Caenorhabditis elegans Hypothetical
protein F37B4.7 protein.
Length = 424
Score = 27.9 bits (59), Expect = 3.3
Identities = 10/35 (28%), Positives = 20/35 (57%)
Frame = +2
Query: 236 IDWRKGVRRSLSEDDKYSYFTEDVDLNTYMYYLHM 340
++W++ + L +++ E VD ++YM YL M
Sbjct: 183 VEWKEAYEKKLEDNNVQGNLKEIVDQSSYMDYLRM 217
>Z98866-1|CAB11558.1| 416|Caenorhabditis elegans Hypothetical
protein Y49E10.1 protein.
Length = 416
Score = 27.5 bits (58), Expect = 4.4
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +2
Query: 140 NKAFMMKMTKAATDPVLMNYYGIKVTDKSMVVIDWRKGVRR 262
+K K+T+ + + L Y+ KV D V D + VRR
Sbjct: 14 SKPTAQKLTEESDEKTLRKYFSTKVDDAQQKVADKSQNVRR 54
>U41993-4|AAA83446.4| 574|Caenorhabditis elegans Hypothetical
protein F44A2.3 protein.
Length = 574
Score = 27.1 bits (57), Expect = 5.8
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = +2
Query: 80 ITLPAPYEIYPYFFVDSHVINKAFMMKMTKAATDPVLMNYYGIKVTDKSMVV 235
+ +PA + + VD+H + + + A +P N + I+VTD VV
Sbjct: 58 VNIPATRQCFTEGCVDAHSFRMSSFRQPSFVAFEPHFPNKFRIRVTDFDFVV 109
>U23523-5|AAC46556.1| 77|Caenorhabditis elegans Hypothetical
protein F53A9.1 protein.
Length = 77
Score = 27.1 bits (57), Expect = 5.8
Identities = 12/28 (42%), Positives = 15/28 (53%), Gaps = 2/28 (7%)
Frame = -2
Query: 205 PVIVHKHRVGGSFS--HLHHEGFVDDMG 128
P VH H GG H HH GF+ ++G
Sbjct: 31 PQTVHVHTDGGHHHGHHHHHHGFLHELG 58
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,671,994
Number of Sequences: 27780
Number of extensions: 159732
Number of successful extensions: 506
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 499
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 506
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 724655464
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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