Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0007_G12
(261 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79605-7|CAB01908.1| 1440|Caenorhabditis elegans Hypothetical pr... 30 0.20
Z79604-7|CAB01901.1| 1440|Caenorhabditis elegans Hypothetical pr... 30 0.20
Z29967-1|CAA82854.1| 1440|Caenorhabditis elegans lin-15B protein. 30 0.20
U10413-1|AAA20089.1| 1440|Caenorhabditis elegans lin-15B protein... 30 0.20
U10412-1|AAA20088.1| 1440|Caenorhabditis elegans lin-15B protein... 30 0.20
AF106575-16|AAC78161.2| 334|Caenorhabditis elegans Serpentine r... 26 3.2
Z49127-3|CAA88946.1| 523|Caenorhabditis elegans Hypothetical pr... 26 4.2
L26987-1|AAA62312.1| 627|Caenorhabditis elegans par-2 protein. 25 5.6
AL117195-31|CAN99709.1| 1459|Caenorhabditis elegans Hypothetical... 25 5.6
AL117195-30|CAB60772.3| 1456|Caenorhabditis elegans Hypothetical... 25 5.6
AL110485-25|CAB60373.1| 672|Caenorhabditis elegans Hypothetical... 25 5.6
AF003136-1|AAK21379.3| 896|Caenorhabditis elegans Importin beta... 25 5.6
Z35719-8|CAA84801.1| 1521|Caenorhabditis elegans Hypothetical pr... 25 7.4
Z35663-17|CAA84737.1| 1521|Caenorhabditis elegans Hypothetical p... 25 7.4
U43375-10|AAA83627.1| 520|Caenorhabditis elegans Hypothetical p... 25 7.4
D14635-1|BAA03484.1| 1521|Caenorhabditis elegans EMB-5 protein. 25 7.4
Z68218-2|CAA92472.1| 313|Caenorhabditis elegans Hypothetical pr... 25 9.8
U80931-5|AAB38001.1| 313|Caenorhabditis elegans Hypothetical pr... 25 9.8
AF047656-11|AAC05106.2| 139|Caenorhabditis elegans Hypothetical... 25 9.8
AF016687-6|AAC48092.3| 309|Caenorhabditis elegans Serpentine re... 25 9.8
>Z79605-7|CAB01908.1| 1440|Caenorhabditis elegans Hypothetical
protein ZK662.4 protein.
Length = 1440
Score = 30.3 bits (65), Expect = 0.20
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = -1
Query: 117 PLPLGSIVSSTGPSKYAKNVIILADP-PVSLISGSSRAS 4
P+P + SS GPS Y + +++LA P S S S A+
Sbjct: 754 PVPNRTTASSQGPSSYPRKIVVLASKLPTSQSSSPSTAT 792
>Z79604-7|CAB01901.1| 1440|Caenorhabditis elegans Hypothetical
protein ZK662.4 protein.
Length = 1440
Score = 30.3 bits (65), Expect = 0.20
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = -1
Query: 117 PLPLGSIVSSTGPSKYAKNVIILADP-PVSLISGSSRAS 4
P+P + SS GPS Y + +++LA P S S S A+
Sbjct: 754 PVPNRTTASSQGPSSYPRKIVVLASKLPTSQSSSPSTAT 792
>Z29967-1|CAA82854.1| 1440|Caenorhabditis elegans lin-15B protein.
Length = 1440
Score = 30.3 bits (65), Expect = 0.20
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = -1
Query: 117 PLPLGSIVSSTGPSKYAKNVIILADP-PVSLISGSSRAS 4
P+P + SS GPS Y + +++LA P S S S A+
Sbjct: 754 PVPNRTTASSQGPSSYPRKIVVLASKLPTSQSSSPSTAT 792
>U10413-1|AAA20089.1| 1440|Caenorhabditis elegans lin-15B protein
protein.
Length = 1440
Score = 30.3 bits (65), Expect = 0.20
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = -1
Query: 117 PLPLGSIVSSTGPSKYAKNVIILADP-PVSLISGSSRAS 4
P+P + SS GPS Y + +++LA P S S S A+
Sbjct: 754 PVPNRTTASSQGPSSYPRKIVVLASKLPTSQSSSPSTAT 792
>U10412-1|AAA20088.1| 1440|Caenorhabditis elegans lin-15B protein
protein.
Length = 1440
Score = 30.3 bits (65), Expect = 0.20
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = -1
Query: 117 PLPLGSIVSSTGPSKYAKNVIILADP-PVSLISGSSRAS 4
P+P + SS GPS Y + +++LA P S S S A+
Sbjct: 754 PVPNRTTASSQGPSSYPRKIVVLASKLPTSQSSSPSTAT 792
>AF106575-16|AAC78161.2| 334|Caenorhabditis elegans Serpentine
receptor, class h protein3 protein.
Length = 334
Score = 26.2 bits (55), Expect = 3.2
Identities = 22/61 (36%), Positives = 32/61 (52%)
Frame = -1
Query: 186 MAATFSRALRDLSVAITNE*RIVPLPLGSIVSSTGPSKYAKNVIILADPPVSLISGSSRA 7
MA FS L D+ + + + IV LP+ + S+T S+YA NV L P +G+S
Sbjct: 52 MAHIFSGFLLDIVMGVLWKVTIV-LPVPVMCSNTFASEYAPNVFQLL-PACFAYTGASAI 109
Query: 6 S 4
S
Sbjct: 110 S 110
>Z49127-3|CAA88946.1| 523|Caenorhabditis elegans Hypothetical
protein F13D12.4a protein.
Length = 523
Score = 25.8 bits (54), Expect = 4.2
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +3
Query: 141 WRRTSPLTRVKMSQPYERSNKRQCESRARNVTRE 242
W+ TSPLTR + + KR + A ++T E
Sbjct: 83 WKNTSPLTRQQCMFKLQALIKRDMKKLAESITIE 116
>L26987-1|AAA62312.1| 627|Caenorhabditis elegans par-2 protein.
Length = 627
Score = 25.4 bits (53), Expect = 5.6
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -1
Query: 177 TFSRALRDLSVAITNE*RIVPLP 109
TF RA+R L + T+ RI+P+P
Sbjct: 435 TFVRAIRQLFLEGTDRIRIIPMP 457
>AL117195-31|CAN99709.1| 1459|Caenorhabditis elegans Hypothetical
protein Y57A10A.18b protein.
Length = 1459
Score = 25.4 bits (53), Expect = 5.6
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +2
Query: 44 SAKIITFLAYLE-GPVLDTMLPKGKGTILHSFVMATDKSLNAR 169
+AK+ + +E GPV+ T GK T L + KSLN +
Sbjct: 372 NAKLFESIERIEKGPVVCTDTTHGKPTSLRQALTGAQKSLNGK 414
>AL117195-30|CAB60772.3| 1456|Caenorhabditis elegans Hypothetical
protein Y57A10A.18a protein.
Length = 1456
Score = 25.4 bits (53), Expect = 5.6
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +2
Query: 44 SAKIITFLAYLE-GPVLDTMLPKGKGTILHSFVMATDKSLNAR 169
+AK+ + +E GPV+ T GK T L + KSLN +
Sbjct: 372 NAKLFESIERIEKGPVVCTDTTHGKPTSLRQALTGAQKSLNGK 414
>AL110485-25|CAB60373.1| 672|Caenorhabditis elegans Hypothetical
protein Y46G5A.31 protein.
Length = 672
Score = 25.4 bits (53), Expect = 5.6
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +1
Query: 52 DYNVLGVFRRTCARYDAPQRQGYNSSFIRNGDGQVP 159
D+ LGVF R C R + +R+ +G+VP
Sbjct: 618 DWQNLGVFYRDCRRLALERLHPDVDKIMRDNEGKVP 653
>AF003136-1|AAK21379.3| 896|Caenorhabditis elegans Importin beta
family protein 1 protein.
Length = 896
Score = 25.4 bits (53), Expect = 5.6
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +2
Query: 47 AKIITFLAYLEGPVLDTMLPKGKGTILHSFVMATDKSLNARENVA 181
A I+ F + L+GP +LP + + DK++N R+ A
Sbjct: 391 AAIMAFGSILDGPDPKKLLPMAQEALPAIVAAMCDKNVNVRDTAA 435
>Z35719-8|CAA84801.1| 1521|Caenorhabditis elegans Hypothetical protein
T04A8.14 protein.
Length = 1521
Score = 25.0 bits (52), Expect = 7.4
Identities = 9/12 (75%), Positives = 12/12 (100%)
Frame = +3
Query: 153 SPLTRVKMSQPY 188
+PLTRVK++QPY
Sbjct: 1222 NPLTRVKINQPY 1233
>Z35663-17|CAA84737.1| 1521|Caenorhabditis elegans Hypothetical
protein T04A8.14 protein.
Length = 1521
Score = 25.0 bits (52), Expect = 7.4
Identities = 9/12 (75%), Positives = 12/12 (100%)
Frame = +3
Query: 153 SPLTRVKMSQPY 188
+PLTRVK++QPY
Sbjct: 1222 NPLTRVKINQPY 1233
>U43375-10|AAA83627.1| 520|Caenorhabditis elegans Hypothetical
protein K09C4.1a protein.
Length = 520
Score = 25.0 bits (52), Expect = 7.4
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = -1
Query: 84 GPSKYAKNVIILADPPVSLISGSSRASK 1
G KY+K++++LA + ISGSS +K
Sbjct: 339 GVMKYSKSMLLLAFEILVFISGSSLITK 366
>D14635-1|BAA03484.1| 1521|Caenorhabditis elegans EMB-5 protein.
Length = 1521
Score = 25.0 bits (52), Expect = 7.4
Identities = 9/12 (75%), Positives = 12/12 (100%)
Frame = +3
Query: 153 SPLTRVKMSQPY 188
+PLTRVK++QPY
Sbjct: 1222 NPLTRVKINQPY 1233
>Z68218-2|CAA92472.1| 313|Caenorhabditis elegans Hypothetical
protein K01H12.2 protein.
Length = 313
Score = 24.6 bits (51), Expect = 9.8
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = +2
Query: 170 ENVAAIRALEQATMRIAREKRYQGV 244
E V + ++ A++ IA +KRY+G+
Sbjct: 47 ERVKLLLQVQDASLTIAADKRYKGI 71
>U80931-5|AAB38001.1| 313|Caenorhabditis elegans Hypothetical
protein T01B11.4 protein.
Length = 313
Score = 24.6 bits (51), Expect = 9.8
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = +2
Query: 170 ENVAAIRALEQATMRIAREKRYQGV 244
E V + ++ A++ IA +KRY+G+
Sbjct: 47 ERVKLLLQVQDASLTIAADKRYKGI 71
>AF047656-11|AAC05106.2| 139|Caenorhabditis elegans Hypothetical
protein F17E9.3 protein.
Length = 139
Score = 24.6 bits (51), Expect = 9.8
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +1
Query: 82 TCARYDAPQRQGYNSSFIRNGDGQ 153
T R D+P R Y F +GDG+
Sbjct: 64 TLFRTDSPDRMSYQFRFEEDGDGK 87
>AF016687-6|AAC48092.3| 309|Caenorhabditis elegans Serpentine
receptor, class h protein282 protein.
Length = 309
Score = 24.6 bits (51), Expect = 9.8
Identities = 12/55 (21%), Positives = 26/55 (47%)
Frame = +2
Query: 83 PVLDTMLPKGKGTILHSFVMATDKSLNARENVAAIRALEQATMRIAREKRYQGVF 247
P+L +LP I+ ++ ++ S N N+ ++ + + I +K Y+ F
Sbjct: 248 PLLFVVLPSAWLAIMGAYNISDQGSGNLARNIISLHGVSSTVLMIYLQKPYRQYF 302
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,894,158
Number of Sequences: 27780
Number of extensions: 103394
Number of successful extensions: 208
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 205
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 208
length of database: 12,740,198
effective HSP length: 65
effective length of database: 10,934,498
effective search space used: 229624458
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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