Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0007_G12
         (261 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF393497-1|AAL60422.1|  143|Apis mellifera odorant binding prote...    22   1.4  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   1.4  
AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic ac...    21   2.5  

>AF393497-1|AAL60422.1|  143|Apis mellifera odorant binding protein
           ASP5 protein.
          Length = 143

 Score = 21.8 bits (44), Expect = 1.4
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = +3

Query: 180 QPYERSNKRQCESRARNVTRECLQQ 254
           +P +  +  Q E  A+N+ + CLQ+
Sbjct: 19  KPVKSMSADQVEKLAKNMRKSCLQK 43


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.8 bits (44), Expect = 1.4
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +2

Query: 176  VAAIRALEQATMRIAREKRYQGV 244
            V A+RA+++  M + R   Y GV
Sbjct: 1049 VEAVRAVQRGEMSVHRAGSYYGV 1071


>AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha-3 protein.
          Length = 537

 Score = 21.0 bits (42), Expect = 2.5
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = -2

Query: 143 PLRMNEELYPC 111
           P   NEE YPC
Sbjct: 221 PASRNEEYYPC 231


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,408
Number of Sequences: 438
Number of extensions: 1370
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 48
effective length of database: 125,319
effective search space used:  4762122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)