Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0007_G11
         (227 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    24   0.27 
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              22   0.83 
AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor p...    21   1.5  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    21   1.5  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               20   3.4  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          20   4.4  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    19   5.9  
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           19   7.8  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    19   7.8  

>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 23.8 bits (49), Expect = 0.27
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = -1

Query: 113 LKLAYNQLQPRPHIGQQLTRSSAEKWK 33
           +++AY + Q R     +L R +A+KW+
Sbjct: 843 IEVAYKKHQIRKQKKMELARHAADKWR 869


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 22.2 bits (45), Expect = 0.83
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = -1

Query: 209 DVHTVEFRKVANIGLSYNCHPIQAQ 135
           D+  +++ + A++  SYNC PI  Q
Sbjct: 679 DLKNMKYTRSADLS-SYNCVPINVQ 702


>AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor
           protein.
          Length = 139

 Score = 21.4 bits (43), Expect = 1.5
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = +1

Query: 7   CIYSNATKHFHFSAEDLVSCC 69
           CIY+  +K F F+ + ++  C
Sbjct: 60  CIYALFSKDFRFAFKSIICKC 80


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.4 bits (43), Expect = 1.5
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = +1

Query: 7   CIYSNATKHFHFSAEDLVSCC 69
           CIY+  +K F F+ + ++  C
Sbjct: 508 CIYALFSKDFRFAFKSIICKC 528


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 20.2 bits (40), Expect = 3.4
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = -1

Query: 122 IPKLKLAYNQLQPRPHIGQQLTRSSAEKWKCLV 24
           IPKL++A ++    PH       +   +WK L+
Sbjct: 605 IPKLQIALSEFVINPHQQHLDQWNWVYEWKELI 637


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 19.8 bits (39), Expect = 4.4
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -3

Query: 165 EL*LPPDTSPT 133
           E+ LPP+T PT
Sbjct: 289 EVDLPPETQPT 299


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 19.4 bits (38), Expect = 5.9
 Identities = 8/31 (25%), Positives = 17/31 (54%)
 Frame = +3

Query: 129 STLGLYRVAIITQANVCDLTKFHRVNITYLE 221
           ++  L++   + +ANV  L  F   N+T ++
Sbjct: 331 TSTSLWKDKAMIEANVAVLHSFQMKNVTIVD 361


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 19.0 bits (37), Expect = 7.8
 Identities = 10/39 (25%), Positives = 17/39 (43%)
 Frame = -2

Query: 214 YVMFTRWNFVRSQTLA*VIIATRYKPNVLPIFPS*SWHT 98
           ++   +W      TL  V   ++ K   L  +P+  WHT
Sbjct: 200 FITLPKWKDGIPVTLTTVPKHSKTKSPKLRPYPNWEWHT 238


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 19.0 bits (37), Expect = 7.8
 Identities = 7/23 (30%), Positives = 12/23 (52%)
 Frame = -1

Query: 125 NIPKLKLAYNQLQPRPHIGQQLT 57
           N+ ++   YN   P P+ G + T
Sbjct: 49  NLGEIYYIYNPRYPLPYSGSKCT 71


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,492
Number of Sequences: 438
Number of extensions: 1218
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 46
effective length of database: 126,195
effective search space used:  3659655
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)