Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0007_G10
(665 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC25H1.03 |mug66|mug66|meiotically upregulated gene Mug66|Schi... 33 0.028
SPAC4A8.04 |isp6|prb1|vacuolar serine protease Isp6|Schizosaccha... 29 0.80
SPBP23A10.04 |apc2||anaphase-promoting complex subunit Apc2 |Sch... 28 1.1
SPAC19G12.07c |rsd1||RNA-binding protein Rsd1|Schizosaccharomyce... 27 2.4
SPAC1687.10 |mcp1||sequence orphan|Schizosaccharomyces pombe|chr... 27 2.4
SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomy... 27 3.2
SPAC22F3.13 |tsc1||hamartin|Schizosaccharomyces pombe|chr 1|||Ma... 26 4.2
SPBC418.02 |||NatA N-acetyltransferase complex subunit |Schizosa... 26 5.6
SPAC1A6.02 ||SPAC23C4.21|WD repeat protein, human WDR55 family|S... 26 5.6
SPBC1289.02c |uap2||U2 snRNP-associated protein Uap2|Schizosacch... 25 7.4
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 25 7.4
SPAC6G9.12 |cfr1||Chs five related protein Cfr1|Schizosaccharomy... 25 7.4
SPBC1271.14 |||glutamate N-acetyltransferase |Schizosaccharomyce... 25 7.4
SPBC13E7.05 |gpi14||pig-M|Schizosaccharomyces pombe|chr 2|||Manual 25 9.8
SPCC584.15c |||arrestin/PY protein 2|Schizosaccharomyces pombe|c... 25 9.8
>SPAC25H1.03 |mug66|mug66|meiotically upregulated gene
Mug66|Schizosaccharomyces pombe|chr 1|||Manual
Length = 184
Score = 33.5 bits (73), Expect = 0.028
Identities = 38/173 (21%), Positives = 70/173 (40%)
Frame = +3
Query: 123 TITFELSMEGRQVDEVVASIFHTVLFHRSSGKFTYNNEESYSIRTVSYVDVDCDFIDFTY 302
T+T EL + + EVV ++ +LFHR +F+ + RT+ D +D T
Sbjct: 4 TVTIELKIGYKYAAEVVKAVLGVILFHR---QFS-----TVPARTI-------DVLDITV 48
Query: 303 VCCESELLGRNVKREITGFSELLRAVDATSAPPRGSISLEFFQKRRARWPFQQPECVPWE 482
L + + F + +R A G + L +++ + F + +PWE
Sbjct: 49 PTLVGAELNEQLATKAAEFIDTIR----NEAGANGQMILLLYERSPKKSWFGKGNTIPWE 104
Query: 483 VWTVFCELTESRNEHDMHTKHENIVEMLQDKIVFITEIINRHEYVPKMPSRSG 641
W + + E E D + + +E ++IV + Y+P + SG
Sbjct: 105 QWILHTTILE---EGDSYQESSLSLEAAVEQIVQAVN-LRSLSYLPPVAMDSG 153
>SPAC4A8.04 |isp6|prb1|vacuolar serine protease
Isp6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 467
Score = 28.7 bits (61), Expect = 0.80
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = +3
Query: 72 GTVNSRRFTDAGKMNARTITFELSMEGRQVDEVVASIFHTVLFHRSSGKFT 224
GT+ SR + A K + S + +V+A + TV H+SSGK T
Sbjct: 259 GTIASRAYGVAKKAEIVAVKVLRSSGSGTMADVIAGVEWTVRHHKSSGKKT 309
>SPBP23A10.04 |apc2||anaphase-promoting complex subunit Apc2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 681
Score = 28.3 bits (60), Expect = 1.1
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +2
Query: 218 IHIQQRGELLDTDRQLCRCRLRFYRLHLRVL 310
+HI++ ELLD +++ L+F+ LH RVL
Sbjct: 543 LHIEKAAELLDQPKEIVERHLKFW-LHHRVL 572
>SPAC19G12.07c |rsd1||RNA-binding protein Rsd1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 604
Score = 27.1 bits (57), Expect = 2.4
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +1
Query: 136 NSQWRGGRSTKSSPVYSTPFYFTVP 210
+ +W GGR+ K+S + T +YF P
Sbjct: 575 HQRWFGGRTIKASILPETDYYFKFP 599
>SPAC1687.10 |mcp1||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 661
Score = 27.1 bits (57), Expect = 2.4
Identities = 24/90 (26%), Positives = 37/90 (41%), Gaps = 2/90 (2%)
Frame = -2
Query: 514 DSVSSQNTVHTSQGTHSGCWKGQRARRFWKNSRLIEPRGGA--DVASTARSSSEKPVISL 341
D+ S + + T SGC ++ + R R G S SSS PV +
Sbjct: 477 DTRSVSKSKRLVRETSSGCLFKNHSKSNTLSPRRKGSRHGPREPCLSPDASSSSIPVTDI 536
Query: 340 LTFLPNSSDSQHT*VKSIKSQSTST*LTVR 251
LP+ D+ H VK S +T +++R
Sbjct: 537 KEILPSQHDTPHNSVKLTGSSTTPASVSLR 566
>SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 4924
Score = 26.6 bits (56), Expect = 3.2
Identities = 7/31 (22%), Positives = 21/31 (67%)
Frame = -1
Query: 635 STRHLRDVLVSINDLRYEHNFILQHFDNILV 543
S + +D ++ + L+Y+++F ++F+N+ +
Sbjct: 4031 SRKPFKDYIIQLYSLKYDYDFWFKYFENLSI 4061
>SPAC22F3.13 |tsc1||hamartin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 899
Score = 26.2 bits (55), Expect = 4.2
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = -1
Query: 653 IKSASGSTRHL-RDVLVSINDLRYEHNFILQHFDNI-LVFRVHIV 525
+ S + + R L RD+L N+LR+E QH NI + R HI+
Sbjct: 540 LSSTNDTIRRLQRDLLFLQNELRFEKFVRQQHLQNIGKLHREHIL 584
>SPBC418.02 |||NatA N-acetyltransferase complex subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 25.8 bits (54), Expect = 5.6
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = -2
Query: 658 RKSNRHPDRLGILGTYSCRLMISVMNTILSCNIST 554
+K +HPD + +LG C+L S + +L C ++
Sbjct: 36 KKKPKHPDSVALLGLNLCKLHDS-RSALLKCGYAS 69
>SPAC1A6.02 ||SPAC23C4.21|WD repeat protein, human WDR55
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 361
Score = 25.8 bits (54), Expect = 5.6
Identities = 18/75 (24%), Positives = 27/75 (36%)
Frame = +3
Query: 243 YSIRTVSYVDVDCDFIDFTYVCCESELLGRNVKREITGFSELLRAVDATSAPPRGSISLE 422
+SI T++ D D ++ + C + N I G VDA G+ +
Sbjct: 240 FSIETITRADSDSLYVGGSDGCIRLLHILPNKYERIIGQHSSRSTVDAVDVTTEGNFLVS 299
Query: 423 FFQKRRARWPFQQPE 467
A WP Q E
Sbjct: 300 CSGTELAFWPVDQKE 314
>SPBC1289.02c |uap2||U2 snRNP-associated protein
Uap2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 367
Score = 25.4 bits (53), Expect = 7.4
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = +3
Query: 144 MEGRQVDE--VVASIFHTVLFHRSSGKFTYNNEESYSIRTVSYVD 272
M+GR D V ASI+ + + SGK T ++EE R + D
Sbjct: 317 MQGRYFDGRVVEASIYDGKVRFQKSGKHTLDDEEDEEKRLEKFAD 361
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 25.4 bits (53), Expect = 7.4
Identities = 13/45 (28%), Positives = 20/45 (44%)
Frame = +2
Query: 362 GTTAGGRRYVRPASGFDKPRVLPETSRSLALPATGMRALGSVDRV 496
G+T+G RP + V+P TS ++ +TG V V
Sbjct: 765 GSTSGSATGTRPTGSSSQGSVVPTTSTGSSVTSTGTGTTTGVTEV 809
>SPAC6G9.12 |cfr1||Chs five related protein Cfr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 620
Score = 25.4 bits (53), Expect = 7.4
Identities = 17/63 (26%), Positives = 28/63 (44%)
Frame = -2
Query: 499 QNTVHTSQGTHSGCWKGQRARRFWKNSRLIEPRGGADVASTARSSSEKPVISLLTFLPNS 320
+NT +QG S Q ++ +NS EP A V + A + + I + + +
Sbjct: 289 KNTAEVAQGAASAKAPQQTTQQGTQNSANAEPSSSASVPAEAPETEAEQSIDVSSDIGLR 348
Query: 319 SDS 311
SDS
Sbjct: 349 SDS 351
>SPBC1271.14 |||glutamate N-acetyltransferase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 445
Score = 25.4 bits (53), Expect = 7.4
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = -1
Query: 311 AAHVSEVDKIAIDIDITDGPYRVTLLVVVCEFTAGTVK*N 192
A+ + D++ +D+D+ GPY T C+F+ V+ N
Sbjct: 403 ASEILSQDELTVDVDLGCGPYAKTNW--TCDFSYDYVRIN 440
>SPBC13E7.05 |gpi14||pig-M|Schizosaccharomyces pombe|chr 2|||Manual
Length = 815
Score = 25.0 bits (52), Expect = 9.8
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -2
Query: 604 RLMISVMNTILSCNISTIFSCFV 536
R++IS ++S IST++ CFV
Sbjct: 154 RIIISQKAALVSIGISTLYYCFV 176
>SPCC584.15c |||arrestin/PY protein 2|Schizosaccharomyces pombe|chr
3|||Manual
Length = 594
Score = 25.0 bits (52), Expect = 9.8
Identities = 17/80 (21%), Positives = 31/80 (38%)
Frame = +3
Query: 225 YNNEESYSIRTVSYVDVDCDFIDFTYVCCESELLGRNVKREITGFSELLRAVDATSAPPR 404
YN E + + + +D + S + +N+K ++G S + A ++ A P
Sbjct: 21 YNAEANVIVLYGNSMDTSARLSGIVVLSVSSPIRVKNIKLRLSGRSFVCWADESRHASPG 80
Query: 405 GSISLEFFQKRRARWPFQQP 464
I + Q W F P
Sbjct: 81 NRIRRQVVQILDKSWSFLAP 100
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,768,381
Number of Sequences: 5004
Number of extensions: 59389
Number of successful extensions: 193
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 181
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 192
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 303841898
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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