Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0007_G10
(665 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC084158-21|AAK68581.1| 271|Caenorhabditis elegans Hypothetical... 70 1e-12
AC084158-23|AAP31422.1| 187|Caenorhabditis elegans Hypothetical... 38 0.005
AC084158-22|AAM15623.1| 214|Caenorhabditis elegans Hypothetical... 38 0.005
U23180-3|AAC46729.2| 856|Caenorhabditis elegans Hypothetical pr... 31 0.56
AF016446-13|AAC24172.1| 349|Caenorhabditis elegans Seven tm rec... 31 0.73
Z49068-2|CAA88855.1| 389|Caenorhabditis elegans Hypothetical pr... 31 0.97
Z99283-7|CAB16537.2| 985|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z92782-14|CAI46605.1| 985|Caenorhabditis elegans Hypothetical p... 30 1.3
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 29 3.0
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 29 3.0
>AC084158-21|AAK68581.1| 271|Caenorhabditis elegans Hypothetical
protein Y69A2AR.7a protein.
Length = 271
Score = 70.1 bits (164), Expect = 1e-12
Identities = 38/99 (38%), Positives = 57/99 (57%), Gaps = 1/99 (1%)
Frame = +3
Query: 111 MNARTITFELSMEGRQVDEVVASIFHTVLFHRSSGKFTYNNEESYSIRTVSYVDVDCDFI 290
MN R L++E RQV + V IFH++L HR+ G+F YN+E+++S+ ++ +V C+ I
Sbjct: 1 MNIRQNELRLTVELRQVTDAVECIFHSLLLHRTLGRFQYNDEKTFSMGSIGIKEVSCEQI 60
Query: 291 DFTYVCCESELLGRNVKREITGFS-ELLRAVDATSAPPR 404
D TYV S L V +I F E+ A + S P R
Sbjct: 61 DMTYVRVNSTELAMCVDEDIRQFKCEVEEATCSGSIPRR 99
Score = 38.3 bits (85), Expect = 0.005
Identities = 13/54 (24%), Positives = 30/54 (55%)
Frame = +3
Query: 477 WEVWTVFCELTESRNEHDMHTKHENIVEMLQDKIVFITEIINRHEYVPKMPSRS 638
WE W + ++ + ++ + + + + +K++ I E IN + Y PKMP+++
Sbjct: 159 WEEWKLILDVFRVESIDELQKMRQRVADDIGEKVLDICEHINHNHYTPKMPTKT 212
>AC084158-23|AAP31422.1| 187|Caenorhabditis elegans Hypothetical
protein Y69A2AR.7c protein.
Length = 187
Score = 38.3 bits (85), Expect = 0.005
Identities = 13/54 (24%), Positives = 30/54 (55%)
Frame = +3
Query: 477 WEVWTVFCELTESRNEHDMHTKHENIVEMLQDKIVFITEIINRHEYVPKMPSRS 638
WE W + ++ + ++ + + + + +K++ I E IN + Y PKMP+++
Sbjct: 86 WEEWKLILDVFRVESIDELQKMRQRVADDIGEKVLDICEHINHNHYTPKMPTKT 139
>AC084158-22|AAM15623.1| 214|Caenorhabditis elegans Hypothetical
protein Y69A2AR.7b protein.
Length = 214
Score = 38.3 bits (85), Expect = 0.005
Identities = 13/54 (24%), Positives = 30/54 (55%)
Frame = +3
Query: 477 WEVWTVFCELTESRNEHDMHTKHENIVEMLQDKIVFITEIINRHEYVPKMPSRS 638
WE W + ++ + ++ + + + + +K++ I E IN + Y PKMP+++
Sbjct: 113 WEEWKLILDVFRVESIDELQKMRQRVADDIGEKVLDICEHINHNHYTPKMPTKT 166
>U23180-3|AAC46729.2| 856|Caenorhabditis elegans Hypothetical
protein C28F5.4 protein.
Length = 856
Score = 31.5 bits (68), Expect = 0.56
Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = +3
Query: 96 TDAGKMNARTITFELSMEGRQ-VDEVVASIFHTVLFHRSSGKFTYNNEESYSIRTVSY 266
T A ++T +LS EG + VD+V+ +F+ + F +SSG + ++E + V +
Sbjct: 329 TIASGFGVFSVTMDLSTEGLEHVDDVIQLVFNFIGFLKSSGPQKWIHDELAELNAVDF 386
>AF016446-13|AAC24172.1| 349|Caenorhabditis elegans Seven tm
receptor protein 211 protein.
Length = 349
Score = 31.1 bits (67), Expect = 0.73
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = -2
Query: 595 ISVMNTILSCNISTIFSCFVCISCSLR-DSVSSQNTVHTSQGTHS 464
I +M +S NIS +FS + I C LR D++ S ++ H Q HS
Sbjct: 205 IGIMLDSMSINISLMFSAYFGIKCWLRMDAIFSSSSTH-FQNLHS 248
>Z49068-2|CAA88855.1| 389|Caenorhabditis elegans Hypothetical
protein K01C8.2 protein.
Length = 389
Score = 30.7 bits (66), Expect = 0.97
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = -2
Query: 619 GTYSCRLMISVMNTILSCNISTIFSCFVCISCSLRDSVSSQNTV 488
GT SC +S + SC ST+ S F+C S + S N +
Sbjct: 145 GTVSCSPSVSTCPSGSSCMQSTLNSAFICCRSSSSQRICSNNQI 188
>Z99283-7|CAB16537.2| 985|Caenorhabditis elegans Hypothetical
protein Y70C5C.1 protein.
Length = 985
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = +3
Query: 126 ITFELSMEGRQ-VDEVVASIFHTVLFHRSSGKFTYNNEESYSIRTVSY 266
+ ELS EG + VDE++ +F+ + +SSG + +EE +R V++
Sbjct: 338 VGIELSTEGLEHVDEIIQLMFNYIGMMQSSGPKQWVHEELAELRAVTF 385
>Z92782-14|CAI46605.1| 985|Caenorhabditis elegans Hypothetical
protein Y70C5C.1 protein.
Length = 985
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = +3
Query: 126 ITFELSMEGRQ-VDEVVASIFHTVLFHRSSGKFTYNNEESYSIRTVSY 266
+ ELS EG + VDE++ +F+ + +SSG + +EE +R V++
Sbjct: 338 VGIELSTEGLEHVDEIIQLMFNYIGMMQSSGPKQWVHEELAELRAVTF 385
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 29.1 bits (62), Expect = 3.0
Identities = 19/58 (32%), Positives = 26/58 (44%)
Frame = -3
Query: 528 RARYGIRSARKTRSTLPRARIPVAGRANERDVSGRTRGLSNPEAGRT*RLPPAVVPRN 355
R R R + ++RS PR R R R R R S + R R PP++VP +
Sbjct: 87 RERDRERRSSRSRSRSPRDRDRERRRRRSRSPPPRRRSRSGGDRRRRERSPPSMVPNS 144
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 29.1 bits (62), Expect = 3.0
Identities = 19/58 (32%), Positives = 26/58 (44%)
Frame = -3
Query: 528 RARYGIRSARKTRSTLPRARIPVAGRANERDVSGRTRGLSNPEAGRT*RLPPAVVPRN 355
R R R + ++RS PR R R R R R S + R R PP++VP +
Sbjct: 87 RERDRERRSSRSRSRSPRDRDRERRRRRSRSPPPRRRSRSGGDRRRRERSPPSMVPNS 144
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,509,796
Number of Sequences: 27780
Number of extensions: 344396
Number of successful extensions: 1096
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1054
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1096
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1497472076
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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