Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0007_G07
(467 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U49356-1|AAA90924.1| 2285|Homo sapiens DNA polymerase epsilon ca... 31 2.0
S60080-1|AAA15448.1| 2257|Homo sapiens DNA polymerase epsilon ca... 31 2.0
L09561-1|AAC19148.1| 2286|Homo sapiens DNA polymerase epsilon, c... 31 2.0
AY273166-1|AAP12650.1| 2265|Homo sapiens polymerase (DNA directe... 31 2.0
AF127975-3|AAD44692.1| 2243|Homo sapiens DNA polymerase epsilon ... 31 2.0
AF127975-2|AAD44691.1| 2286|Homo sapiens DNA polymerase epsilon ... 31 2.0
AF127975-1|AAD44690.1| 2297|Homo sapiens DNA polymerase epsilon ... 31 2.0
BC047602-1|AAH47602.1| 1884|Homo sapiens RTTN protein protein. 31 2.6
AK126538-1|BAC86583.1| 1004|Homo sapiens protein ( Homo sapiens ... 31 2.6
AK129921-1|BAC85250.1| 219|Homo sapiens or (EC 1.10.2.2). prot... 30 4.6
X74614-1|CAA52685.1| 250|Homo sapiens outer dense fiber protein... 29 8.0
BC107873-1|AAI07874.1| 326|Homo sapiens poliovirus receptor rel... 29 8.0
BC104457-1|AAI04458.1| 250|Homo sapiens outer dense fiber of sp... 29 8.0
BC104456-1|AAI04457.1| 250|Homo sapiens outer dense fiber of sp... 29 8.0
BC073861-1|AAH73861.1| 326|Homo sapiens poliovirus receptor rel... 29 8.0
BC001129-1|AAH01129.1| 326|Homo sapiens poliovirus receptor rel... 29 8.0
AK130267-1|BAC85315.1| 346|Homo sapiens protein ( Homo sapiens ... 29 8.0
>U49356-1|AAA90924.1| 2285|Homo sapiens DNA polymerase epsilon
catalytic subunit protein.
Length = 2285
Score = 31.1 bits (67), Expect = 2.0
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +2
Query: 272 VRSALLAASLQPCPMAPVMLAHHYHDHLKLFNNFIISFTRAYIFLLN 412
+RS + L+P + + L HH H LF FI S RA +F+L+
Sbjct: 1469 MRSLAQFSYLEPGSIRHIYLYHHAQAHKALFGIFIPSQRRASVFVLD 1515
>S60080-1|AAA15448.1| 2257|Homo sapiens DNA polymerase epsilon
catalytic subunit protein.
Length = 2257
Score = 31.1 bits (67), Expect = 2.0
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +2
Query: 272 VRSALLAASLQPCPMAPVMLAHHYHDHLKLFNNFIISFTRAYIFLLN 412
+RS + L+P + + L HH H LF FI S RA +F+L+
Sbjct: 1441 MRSLAQFSYLEPGSIRHIYLYHHAQAHKALFGIFIPSQRRASVFVLD 1487
>L09561-1|AAC19148.1| 2286|Homo sapiens DNA polymerase epsilon,
catalytic polypeptide protein.
Length = 2286
Score = 31.1 bits (67), Expect = 2.0
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +2
Query: 272 VRSALLAASLQPCPMAPVMLAHHYHDHLKLFNNFIISFTRAYIFLLN 412
+RS + L+P + + L HH H LF FI S RA +F+L+
Sbjct: 1470 MRSLAQFSYLEPGSIRHIYLYHHAQAHKALFGIFIPSQRRASVFVLD 1516
>AY273166-1|AAP12650.1| 2265|Homo sapiens polymerase (DNA directed),
epsilon protein.
Length = 2265
Score = 31.1 bits (67), Expect = 2.0
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +2
Query: 272 VRSALLAASLQPCPMAPVMLAHHYHDHLKLFNNFIISFTRAYIFLLN 412
+RS + L+P + + L HH H LF FI S RA +F+L+
Sbjct: 1449 MRSLAQFSYLEPGSIRHIYLYHHAQAHKALFGIFIPSQRRASVFVLD 1495
>AF127975-3|AAD44692.1| 2243|Homo sapiens DNA polymerase epsilon
catalytic subunit protein isoform c protein.
Length = 2243
Score = 31.1 bits (67), Expect = 2.0
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +2
Query: 272 VRSALLAASLQPCPMAPVMLAHHYHDHLKLFNNFIISFTRAYIFLLN 412
+RS + L+P + + L HH H LF FI S RA +F+L+
Sbjct: 1427 MRSLAQFSYLEPGSIRHIYLYHHAQAHKALFGIFIPSQRRASVFVLD 1473
>AF127975-2|AAD44691.1| 2286|Homo sapiens DNA polymerase epsilon
catalytic subunit protein isoform b protein.
Length = 2286
Score = 31.1 bits (67), Expect = 2.0
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +2
Query: 272 VRSALLAASLQPCPMAPVMLAHHYHDHLKLFNNFIISFTRAYIFLLN 412
+RS + L+P + + L HH H LF FI S RA +F+L+
Sbjct: 1470 MRSLAQFSYLEPGSIRHIYLYHHAQAHKALFGIFIPSQRRASVFVLD 1516
>AF127975-1|AAD44690.1| 2297|Homo sapiens DNA polymerase epsilon
catalytic subunit protein isoform a protein.
Length = 2297
Score = 31.1 bits (67), Expect = 2.0
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +2
Query: 272 VRSALLAASLQPCPMAPVMLAHHYHDHLKLFNNFIISFTRAYIFLLN 412
+RS + L+P + + L HH H LF FI S RA +F+L+
Sbjct: 1481 MRSLAQFSYLEPGSIRHIYLYHHAQAHKALFGIFIPSQRRASVFVLD 1527
>BC047602-1|AAH47602.1| 1884|Homo sapiens RTTN protein protein.
Length = 1884
Score = 30.7 bits (66), Expect = 2.6
Identities = 20/71 (28%), Positives = 28/71 (39%), Gaps = 1/71 (1%)
Frame = +1
Query: 85 LPVVQQLKAMCLAQDLRAQGVHLDCPAYDVMHCALTSFIRYASPSQWSTSSTCTYPRSFA 264
L + QL CL Q+ + L+ V+H + S Q S C Y +F
Sbjct: 1581 LSIAMQLLRNCLYQNEECKEAALEAHLVPVLHSLWPWILMDDSLMQISLQLLCVYTANFP 1640
Query: 265 GAC-PVCPSSC 294
C +C SSC
Sbjct: 1641 NGCSSLCWSSC 1651
>AK126538-1|BAC86583.1| 1004|Homo sapiens protein ( Homo sapiens
cDNA FLJ44574 fis, clone UTERU3018081. ).
Length = 1004
Score = 30.7 bits (66), Expect = 2.6
Identities = 20/71 (28%), Positives = 28/71 (39%), Gaps = 1/71 (1%)
Frame = +1
Query: 85 LPVVQQLKAMCLAQDLRAQGVHLDCPAYDVMHCALTSFIRYASPSQWSTSSTCTYPRSFA 264
L + QL CL Q+ + L+ V+H + S Q S C Y +F
Sbjct: 701 LSIAMQLLRNCLYQNEECKEAALEAHLVPVLHSLWPWILMDDSLMQISLQLLCVYTANFP 760
Query: 265 GAC-PVCPSSC 294
C +C SSC
Sbjct: 761 NGCSSLCWSSC 771
>AK129921-1|BAC85250.1| 219|Homo sapiens or (EC 1.10.2.2).
protein.
Length = 219
Score = 29.9 bits (64), Expect = 4.6
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = +1
Query: 115 CLAQDLRAQGVHLDCPAYDVMHCALTSFIRYASPSQWSTSSTCTYPRSFAGACPV 279
C+ +DL + P + + C L + +SP+ +S S +P+S +CPV
Sbjct: 54 CMKEDLNLDLFYPPLPFFSPLFC-LHLLLSLSSPTGFSVISHSGFPQSLWSSCPV 107
>X74614-1|CAA52685.1| 250|Homo sapiens outer dense fiber protein
protein.
Length = 250
Score = 29.1 bits (62), Expect = 8.0
Identities = 14/32 (43%), Positives = 14/32 (43%), Gaps = 1/32 (3%)
Frame = +1
Query: 241 CTYPRSFAGACPVC-PSSCIAPAVPYGSCNAC 333
CT P S C C P S P PY CN C
Sbjct: 205 CTSPCSPCSPCNPCNPCSPCNPCSPYDPCNPC 236
>BC107873-1|AAI07874.1| 326|Homo sapiens poliovirus receptor
related immunoglobulin domain containing protein.
Length = 326
Score = 29.1 bits (62), Expect = 8.0
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
Frame = +1
Query: 208 ASPSQWSTSSTCTYPRSFAGACPVCPSS---CIAPAVPYGSCNACTSLPRS 351
A ++W T S+ + +GA C ++ C + P GS AC SLP S
Sbjct: 103 ARQARWETQSSISLILEGSGASSPCANTTFCCKFASFPEGSWEACGSLPPS 153
>BC104457-1|AAI04458.1| 250|Homo sapiens outer dense fiber of sperm
tails 1 protein.
Length = 250
Score = 29.1 bits (62), Expect = 8.0
Identities = 14/32 (43%), Positives = 14/32 (43%), Gaps = 1/32 (3%)
Frame = +1
Query: 241 CTYPRSFAGACPVC-PSSCIAPAVPYGSCNAC 333
CT P S C C P S P PY CN C
Sbjct: 205 CTSPCSPCSPCNPCNPCSPCNPCSPYDPCNPC 236
>BC104456-1|AAI04457.1| 250|Homo sapiens outer dense fiber of sperm
tails 1 protein.
Length = 250
Score = 29.1 bits (62), Expect = 8.0
Identities = 14/32 (43%), Positives = 14/32 (43%), Gaps = 1/32 (3%)
Frame = +1
Query: 241 CTYPRSFAGACPVC-PSSCIAPAVPYGSCNAC 333
CT P S C C P S P PY CN C
Sbjct: 205 CTSPCSPCSPCNPCNPCSPCNPCSPYDPCNPC 236
>BC073861-1|AAH73861.1| 326|Homo sapiens poliovirus receptor
related immunoglobulin domain containing protein.
Length = 326
Score = 29.1 bits (62), Expect = 8.0
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
Frame = +1
Query: 208 ASPSQWSTSSTCTYPRSFAGACPVCPSS---CIAPAVPYGSCNACTSLPRS 351
A ++W T S+ + +GA C ++ C + P GS AC SLP S
Sbjct: 103 ARQARWETQSSISLILEGSGASSPCANTTFCCKFASFPEGSWEACGSLPPS 153
>BC001129-1|AAH01129.1| 326|Homo sapiens poliovirus receptor
related immunoglobulin domain containing protein.
Length = 326
Score = 29.1 bits (62), Expect = 8.0
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
Frame = +1
Query: 208 ASPSQWSTSSTCTYPRSFAGACPVCPSS---CIAPAVPYGSCNACTSLPRS 351
A ++W T S+ + +GA C ++ C + P GS AC SLP S
Sbjct: 103 ARQARWETQSSISLILEGSGASSPCANTTFCCKFASFPEGSWEACGSLPPS 153
>AK130267-1|BAC85315.1| 346|Homo sapiens protein ( Homo sapiens
cDNA FLJ26757 fis, clone PRS02255. ).
Length = 346
Score = 29.1 bits (62), Expect = 8.0
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1
Query: 265 GACPVCPSSCIAPAVPYGSC 324
G+ CPS C+AP P SC
Sbjct: 225 GSSGSCPSLCVAPGAPLSSC 244
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,487,516
Number of Sequences: 237096
Number of extensions: 1251441
Number of successful extensions: 3654
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 3511
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3650
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4042952858
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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