Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0007_G05
         (616 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U80438-3|AAB37633.1|  185|Caenorhabditis elegans Hypothetical pr...   110   9e-25
AF303266-1|AAG50224.1|  185|Caenorhabditis elegans adenine phosp...   110   9e-25
AF022980-3|AAG24187.2|  396|Caenorhabditis elegans Serpentine re...    34   0.093
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr...    29   2.0  
U12965-9|AAA20605.3|  522|Caenorhabditis elegans Hypothetical pr...    29   2.0  
AC024214-7|AAF36078.2|  189|Caenorhabditis elegans Hypothetical ...    29   3.5  
AL117195-10|CAB60771.1| 1072|Caenorhabditis elegans Hypothetical...    27   8.1  
AC006673-6|AAF39926.2|  335|Caenorhabditis elegans Serpentine re...    27   8.1  

>U80438-3|AAB37633.1|  185|Caenorhabditis elegans Hypothetical
           protein T19B4.3 protein.
          Length = 185

 Score =  110 bits (264), Expect = 9e-25
 Identities = 56/137 (40%), Positives = 83/137 (60%)
 Frame = +1

Query: 118 YDKQVDELKSKIKSYPDFPKEGILFWDIFSAIADGSTCKLIQSLLVQCVKAKFPEVEAVI 297
           +D+   +++  I+   DFPK+GI F DI     +      +  ++   V+     V++V 
Sbjct: 6   FDQIRPKIEQHIREVKDFPKKGINFRDIMPLFTNPQLVNELCVVIADHVRHTVGHVDSVA 65

Query: 298 GLEARGFLFSFSLAAELGVGCIPVRKKGKLPGDVVSYAYDLEYGSDVLELQKNHIKPGVK 477
           GLEARGFLF   +A +LGV  +P+RKKGKLPG  +  +Y  EYG D +E+Q+  IK G  
Sbjct: 66  GLEARGFLFGPQVAIQLGVPFVPIRKKGKLPGATIEASYVKEYGEDRVEIQEGAIKNGDI 125

Query: 478 CLIIDDLIATGGSITAA 528
             +IDDL+ATGG++ AA
Sbjct: 126 VFLIDDLLATGGTLRAA 142


>AF303266-1|AAG50224.1|  185|Caenorhabditis elegans adenine
           phosphoribosyltransferase protein.
          Length = 185

 Score =  110 bits (264), Expect = 9e-25
 Identities = 56/137 (40%), Positives = 83/137 (60%)
 Frame = +1

Query: 118 YDKQVDELKSKIKSYPDFPKEGILFWDIFSAIADGSTCKLIQSLLVQCVKAKFPEVEAVI 297
           +D+   +++  I+   DFPK+GI F DI     +      +  ++   V+     V++V 
Sbjct: 6   FDQIRPKIEQHIREVKDFPKKGINFRDIMPLFTNPQLVNELCVVIADHVRHTVGHVDSVA 65

Query: 298 GLEARGFLFSFSLAAELGVGCIPVRKKGKLPGDVVSYAYDLEYGSDVLELQKNHIKPGVK 477
           GLEARGFLF   +A +LGV  +P+RKKGKLPG  +  +Y  EYG D +E+Q+  IK G  
Sbjct: 66  GLEARGFLFGPQVAIQLGVPFVPIRKKGKLPGATIEASYVKEYGEDRVEIQEGAIKNGDI 125

Query: 478 CLIIDDLIATGGSITAA 528
             +IDDL+ATGG++ AA
Sbjct: 126 VFLIDDLLATGGTLRAA 142


>AF022980-3|AAG24187.2|  396|Caenorhabditis elegans Serpentine
           receptor, class w protein2 protein.
          Length = 396

 Score = 33.9 bits (74), Expect = 0.093
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = -2

Query: 498 KIIYYQTFHPWFDMIFLQFKYIRTILQIICI*YNI 394
           +I+ Y     WFD +FL+F Y+  ILQ   +  N+
Sbjct: 22  EIVKYVEIPSWFDEVFLKFNYVIAILQFFAVAINL 56


>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
            K06A9.1b protein.
          Length = 2232

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 14/44 (31%), Positives = 27/44 (61%)
 Frame = -3

Query: 401  TTSPGSFPFFLTGMQPTPSSAANEKEKRKPRASKPITASTSGNL 270
            T+SPGS    LT + P+PS ++     +   ++ P+ ++TSG++
Sbjct: 1108 TSSPGSSGTTLTSISPSPSQSSTIGSSQ--GSTSPVVSTTSGDM 1149


>U12965-9|AAA20605.3|  522|Caenorhabditis elegans Hypothetical
           protein F23F12.3 protein.
          Length = 522

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = -2

Query: 384 LPFLPDWYATNTKFSSQ*KREKKASGL 304
           LP  P WYAT  +F    + EKK S L
Sbjct: 243 LPESPKWYATKNRFQEMKEAEKKISWL 269


>AC024214-7|AAF36078.2|  189|Caenorhabditis elegans Hypothetical
           protein Y77E11A.8 protein.
          Length = 189

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = +3

Query: 27  IFCMPTGFSIRY*LNYNCNISFN 95
           I+   TG+ I Y +NY+CN +FN
Sbjct: 113 IYATLTGWKISYKMNYSCNGNFN 135


>AL117195-10|CAB60771.1| 1072|Caenorhabditis elegans Hypothetical
           protein Y57A10A.15 protein.
          Length = 1072

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = +1

Query: 166 DFPKEGILFWDIFSAIADGS 225
           DFP++ ILF+DI   + DG+
Sbjct: 132 DFPRDSILFFDIELVVRDGT 151


>AC006673-6|AAF39926.2|  335|Caenorhabditis elegans Serpentine
           receptor, class h protein7 protein.
          Length = 335

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
 Frame = +1

Query: 190 FWDIFS-AIADGSTCKLIQSLL-VQCVKAKFPEVEAVIGLEARGFLFSFSLAAELGVGCI 363
           F+DI + ++  G++C     LL ++C+ +   ++ A      R FL S  ++A +  GCI
Sbjct: 197 FFDIAAVSVVLGASCAACALLLTIKCINSVKTQLSAKTKQMHRNFLVSLVISAAIHGGCI 256


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,941,870
Number of Sequences: 27780
Number of extensions: 278516
Number of successful extensions: 853
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 814
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 853
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1332243108
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)