Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0007_G05
         (616 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    23   3.1  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          22   5.5  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      22   5.5  
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     21   9.6  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    21   9.6  
AB023025-1|BAA74592.1|  133|Apis mellifera actin protein.              21   9.6  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    21   9.6  

>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = -3

Query: 245 LCISLHVLPSAIAEKISQN 189
           LC++L V+P A+  +IS N
Sbjct: 88  LCVALLVMPMALLYEISGN 106


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -2

Query: 390 WKLPFLPDWYATNT 349
           W+ PF P +Y T T
Sbjct: 287 WQKPFYPGYYPTMT 300


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -2

Query: 390 WKLPFLPDWYATNT 349
           W+ PF P +Y T T
Sbjct: 287 WQKPFYPGYYPTMT 300


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +3

Query: 543 RHVELKSWVA 572
           RH+E K+WVA
Sbjct: 241 RHLERKAWVA 250


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -2

Query: 297 NNSFNFREFSFHTL 256
           NN FNF E +F  L
Sbjct: 391 NNDFNFDEVNFRIL 404


>AB023025-1|BAA74592.1|  133|Apis mellifera actin protein.
          Length = 133

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +1

Query: 508 GGSITAAAKSIEDMW 552
           GGSI A+  + + MW
Sbjct: 117 GGSILASLSTFQQMW 131


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = +3

Query: 288 SCYWLRGPRL 317
           SCYW RG  L
Sbjct: 141 SCYWPRGKNL 150


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,174
Number of Sequences: 438
Number of extensions: 3325
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18215697
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)