Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0007_G04
(351 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L38941-1|AAC41916.1| 117|Homo sapiens ribosomal protein L34 pro... 111 6e-25
CR542242-1|CAG47038.1| 117|Homo sapiens RPL34 protein. 107 1e-23
CR542232-1|CAG47028.1| 117|Homo sapiens RPL34 protein. 107 1e-23
BC106009-1|AAI06010.1| 117|Homo sapiens ribosomal protein L34 p... 107 1e-23
BC070208-1|AAH70208.1| 117|Homo sapiens ribosomal protein L34 p... 107 1e-23
BC001773-1|AAH01773.1| 117|Homo sapiens ribosomal protein L34 p... 107 1e-23
AB061832-1|BAB79470.1| 117|Homo sapiens ribosomal protein L34 p... 107 1e-23
AB007181-1|BAA25840.1| 45|Homo sapiens ribosomal protein L34 p... 60 2e-09
AJ271448-1|CAB93534.2| 495|Homo sapiens protein phosphatase 4 r... 30 2.4
Y10929-1|CAA71860.1| 326|Homo sapiens kruppel-type zinc finger ... 28 7.2
BX537524-1|CAD97772.1| 305|Homo sapiens hypothetical protein pr... 28 7.2
AK131417-1|BAD18564.1| 374|Homo sapiens protein ( Homo sapiens ... 28 7.2
Z11773-1|CAA77818.1| 408|Homo sapiens SRE-ZBP protein. 28 9.5
BX537535-1|CAD97775.1| 323|Homo sapiens hypothetical protein pr... 28 9.5
BC013962-1|AAH13962.1| 325|Homo sapiens zinc finger protein 187... 28 9.5
BC013951-1|AAH13951.1| 325|Homo sapiens zinc finger protein 187... 28 9.5
>L38941-1|AAC41916.1| 117|Homo sapiens ribosomal protein L34
protein.
Length = 117
Score = 111 bits (267), Expect = 6e-25
Identities = 54/96 (56%), Positives = 64/96 (66%), Gaps = 2/96 (2%)
Frame = +1
Query: 10 MVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPR--CGQCKSKLRGIQPAR 183
MVQRLT+RRRLSYNT SN+ R+ RTPG R+VY Y KK K P+ CG C KLRG++P R
Sbjct: 1 MVQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPKSACGVCPGKLRGVRPVR 60
Query: 184 PAQRSRLCYRKKTVKRVYGGVLCHKCGEAAHRRSFL 291
P RL KK V R YGG +C KC +R+FL
Sbjct: 61 PKVLMRLSKTKKHVSRAYGGSMCAKCVRDRIKRAFL 96
Score = 33.5 bits (73), Expect = 0.19
Identities = 20/30 (66%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Frame = +2
Query: 263 VKQRIVGAFLIEEQN-IVKVLKAQQASIKS 349
V+ RI AFLIEEQ IVKVLKAQ S K+
Sbjct: 87 VRDRIKRAFLIEEQKIIVKVLKAQAQSQKA 116
>CR542242-1|CAG47038.1| 117|Homo sapiens RPL34 protein.
Length = 117
Score = 107 bits (256), Expect = 1e-23
Identities = 52/96 (54%), Positives = 63/96 (65%), Gaps = 2/96 (2%)
Frame = +1
Query: 10 MVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPR--CGQCKSKLRGIQPAR 183
MVQRLT+RRRLSYNT SN+ R+ RTPG R+VY Y KK K P+ CG C +LRG++ R
Sbjct: 1 MVQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPKSACGVCPGRLRGVRAVR 60
Query: 184 PAQRSRLCYRKKTVKRVYGGVLCHKCGEAAHRRSFL 291
P RL KK V R YGG +C KC +R+FL
Sbjct: 61 PKVLMRLSKTKKHVSRAYGGSMCAKCVRDRIKRAFL 96
Score = 33.5 bits (73), Expect = 0.19
Identities = 20/30 (66%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Frame = +2
Query: 263 VKQRIVGAFLIEEQNI-VKVLKAQQASIKS 349
V+ RI AFLIEEQ I VKVLKAQ S K+
Sbjct: 87 VRDRIKRAFLIEEQKIVVKVLKAQAQSQKA 116
>CR542232-1|CAG47028.1| 117|Homo sapiens RPL34 protein.
Length = 117
Score = 107 bits (256), Expect = 1e-23
Identities = 52/96 (54%), Positives = 63/96 (65%), Gaps = 2/96 (2%)
Frame = +1
Query: 10 MVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPR--CGQCKSKLRGIQPAR 183
MVQRLT+RRRLSYNT SN+ R+ RTPG R+VY Y KK K P+ CG C +LRG++ R
Sbjct: 1 MVQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPKSACGVCPGRLRGVRAVR 60
Query: 184 PAQRSRLCYRKKTVKRVYGGVLCHKCGEAAHRRSFL 291
P RL KK V R YGG +C KC +R+FL
Sbjct: 61 PKVLMRLSKTKKHVSRAYGGSMCAKCVRDRIKRAFL 96
Score = 33.5 bits (73), Expect = 0.19
Identities = 20/30 (66%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Frame = +2
Query: 263 VKQRIVGAFLIEEQNI-VKVLKAQQASIKS 349
V+ RI AFLIEEQ I VKVLKAQ S K+
Sbjct: 87 VRDRIKRAFLIEEQKIVVKVLKAQAQSQKA 116
>BC106009-1|AAI06010.1| 117|Homo sapiens ribosomal protein L34
protein.
Length = 117
Score = 107 bits (256), Expect = 1e-23
Identities = 52/96 (54%), Positives = 63/96 (65%), Gaps = 2/96 (2%)
Frame = +1
Query: 10 MVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPR--CGQCKSKLRGIQPAR 183
MVQRLT+RRRLSYNT SN+ R+ RTPG R+VY Y KK K P+ CG C +LRG++ R
Sbjct: 1 MVQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPKSACGVCPGRLRGVRAVR 60
Query: 184 PAQRSRLCYRKKTVKRVYGGVLCHKCGEAAHRRSFL 291
P RL KK V R YGG +C KC +R+FL
Sbjct: 61 PKVLMRLSKTKKHVSRAYGGSMCAKCVRDRIKRAFL 96
Score = 33.5 bits (73), Expect = 0.19
Identities = 20/30 (66%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Frame = +2
Query: 263 VKQRIVGAFLIEEQNI-VKVLKAQQASIKS 349
V+ RI AFLIEEQ I VKVLKAQ S K+
Sbjct: 87 VRDRIKRAFLIEEQKIVVKVLKAQAQSQKA 116
>BC070208-1|AAH70208.1| 117|Homo sapiens ribosomal protein L34
protein.
Length = 117
Score = 107 bits (256), Expect = 1e-23
Identities = 52/96 (54%), Positives = 63/96 (65%), Gaps = 2/96 (2%)
Frame = +1
Query: 10 MVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPR--CGQCKSKLRGIQPAR 183
MVQRLT+RRRLSYNT SN+ R+ RTPG R+VY Y KK K P+ CG C +LRG++ R
Sbjct: 1 MVQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPKSACGVCPGRLRGVRAVR 60
Query: 184 PAQRSRLCYRKKTVKRVYGGVLCHKCGEAAHRRSFL 291
P RL KK V R YGG +C KC +R+FL
Sbjct: 61 PKVLMRLSKTKKHVSRAYGGSMCAKCVRDRIKRAFL 96
Score = 33.5 bits (73), Expect = 0.19
Identities = 20/30 (66%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Frame = +2
Query: 263 VKQRIVGAFLIEEQNI-VKVLKAQQASIKS 349
V+ RI AFLIEEQ I VKVLKAQ S K+
Sbjct: 87 VRDRIKRAFLIEEQKIVVKVLKAQAQSQKA 116
>BC001773-1|AAH01773.1| 117|Homo sapiens ribosomal protein L34
protein.
Length = 117
Score = 107 bits (256), Expect = 1e-23
Identities = 52/96 (54%), Positives = 63/96 (65%), Gaps = 2/96 (2%)
Frame = +1
Query: 10 MVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPR--CGQCKSKLRGIQPAR 183
MVQRLT+RRRLSYNT SN+ R+ RTPG R+VY Y KK K P+ CG C +LRG++ R
Sbjct: 1 MVQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPKSACGVCPGRLRGVRAVR 60
Query: 184 PAQRSRLCYRKKTVKRVYGGVLCHKCGEAAHRRSFL 291
P RL KK V R YGG +C KC +R+FL
Sbjct: 61 PKVLMRLSKTKKHVSRAYGGSMCAKCVRDRIKRAFL 96
Score = 33.5 bits (73), Expect = 0.19
Identities = 20/30 (66%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Frame = +2
Query: 263 VKQRIVGAFLIEEQNI-VKVLKAQQASIKS 349
V+ RI AFLIEEQ I VKVLKAQ S K+
Sbjct: 87 VRDRIKRAFLIEEQKIVVKVLKAQAQSQKA 116
>AB061832-1|BAB79470.1| 117|Homo sapiens ribosomal protein L34
protein.
Length = 117
Score = 107 bits (256), Expect = 1e-23
Identities = 52/96 (54%), Positives = 63/96 (65%), Gaps = 2/96 (2%)
Frame = +1
Query: 10 MVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPR--CGQCKSKLRGIQPAR 183
MVQRLT+RRRLSYNT SN+ R+ RTPG R+VY Y KK K P+ CG C +LRG++ R
Sbjct: 1 MVQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPKSACGVCPGRLRGVRAVR 60
Query: 184 PAQRSRLCYRKKTVKRVYGGVLCHKCGEAAHRRSFL 291
P RL KK V R YGG +C KC +R+FL
Sbjct: 61 PKVLMRLSKTKKHVSRAYGGSMCAKCVRDRIKRAFL 96
Score = 33.5 bits (73), Expect = 0.19
Identities = 20/30 (66%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Frame = +2
Query: 263 VKQRIVGAFLIEEQNI-VKVLKAQQASIKS 349
V+ RI AFLIEEQ I VKVLKAQ S K+
Sbjct: 87 VRDRIKRAFLIEEQKIVVKVLKAQAQSQKA 116
>AB007181-1|BAA25840.1| 45|Homo sapiens ribosomal protein L34
protein.
Length = 45
Score = 60.1 bits (139), Expect = 2e-09
Identities = 28/44 (63%), Positives = 33/44 (75%), Gaps = 2/44 (4%)
Frame = +1
Query: 19 RLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPR--CG 144
RLT+RRRLSYNT SN+ R+ RTPG R+VY Y KK K P+ CG
Sbjct: 1 RLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPKSACG 44
>AJ271448-1|CAB93534.2| 495|Homo sapiens protein phosphatase 4
regulatory subunit 2 protein.
Length = 495
Score = 29.9 bits (64), Expect = 2.4
Identities = 20/62 (32%), Positives = 25/62 (40%)
Frame = -2
Query: 350 QTLCWPVALLGLSRCSVLRSRKLRRCAASPHL*QRTPP*TRFTVFLR*QRRERCAGLAGW 171
Q CW GL RCS+ RS L R P PP R + + E G+ G
Sbjct: 3 QAPCWRAGGSGLGRCSLCRSCSLARFPRLPSF----PPPGRLRAGVCAREGEGVGGVGGG 58
Query: 170 IP 165
+P
Sbjct: 59 VP 60
>Y10929-1|CAA71860.1| 326|Homo sapiens kruppel-type zinc finger
protein protein.
Length = 326
Score = 28.3 bits (60), Expect = 7.2
Identities = 11/26 (42%), Positives = 18/26 (69%), Gaps = 2/26 (7%)
Frame = +1
Query: 250 CHKCGEAAHRRSFL--DRRTEHRESP 321
C++CG+ H++SFL +RT R+ P
Sbjct: 259 CNECGKTFHQKSFLTVHQRTHRRKKP 284
>BX537524-1|CAD97772.1| 305|Homo sapiens hypothetical protein
protein.
Length = 305
Score = 28.3 bits (60), Expect = 7.2
Identities = 18/75 (24%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Frame = +1
Query: 115 KKPKKIPRCGQCKSKLRGIQPARPAQRSRLCYRKKTVKRVYGGVLCHKCGEA-AHRRSFL 291
+KP+ C + ++ + +PA L Y++K V +C +CG+A ++ F+
Sbjct: 91 EKPRGCSHCEKAFTQNPALM-YKPAVSDSLLYKRKRVPPTEKPHVCSECGKAFCYKSEFI 149
Query: 292 DRRTEHR-ESPKSAT 333
+ H E P T
Sbjct: 150 RHQRSHTGEKPYGCT 164
>AK131417-1|BAD18564.1| 374|Homo sapiens protein ( Homo sapiens
cDNA FLJ16527 fis, clone OCBBF2009583, weakly similar
to ZINC FINGER PROTEIN 184. ).
Length = 374
Score = 28.3 bits (60), Expect = 7.2
Identities = 18/75 (24%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Frame = +1
Query: 115 KKPKKIPRCGQCKSKLRGIQPARPAQRSRLCYRKKTVKRVYGGVLCHKCGEA-AHRRSFL 291
+KP+ C + ++ + +PA L Y++K V +C +CG+A ++ F+
Sbjct: 185 EKPRGCSHCEKAFTQNPALM-YKPAVSDSLLYKRKRVPPTEKPHVCSECGKAFCYKSEFI 243
Query: 292 DRRTEHR-ESPKSAT 333
+ H E P T
Sbjct: 244 RHQRSHTGEKPYGCT 258
>Z11773-1|CAA77818.1| 408|Homo sapiens SRE-ZBP protein.
Length = 408
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = +1
Query: 190 QRSRLCYRKKTVKRVYGGVLCHKCGEAAHRRSFLDR 297
Q S L KK + R G CH+CG+A R S L R
Sbjct: 195 QSSSLTGHKKVLSREKGHQ-CHECGKAFQRSSHLVR 229
>BX537535-1|CAD97775.1| 323|Homo sapiens hypothetical protein
protein.
Length = 323
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = +1
Query: 190 QRSRLCYRKKTVKRVYGGVLCHKCGEAAHRRSFLDR 297
Q S L KK + R G CH+CG+A R S L R
Sbjct: 110 QSSSLTGHKKVLSREKGHQ-CHECGKAFQRSSHLVR 144
>BC013962-1|AAH13962.1| 325|Homo sapiens zinc finger protein 187
protein.
Length = 325
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = +1
Query: 190 QRSRLCYRKKTVKRVYGGVLCHKCGEAAHRRSFLDR 297
Q S L KK + R G CH+CG+A R S L R
Sbjct: 112 QSSSLTGHKKVLSREKGHQ-CHECGKAFQRSSHLVR 146
>BC013951-1|AAH13951.1| 325|Homo sapiens zinc finger protein 187
protein.
Length = 325
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = +1
Query: 190 QRSRLCYRKKTVKRVYGGVLCHKCGEAAHRRSFLDR 297
Q S L KK + R G CH+CG+A R S L R
Sbjct: 112 QSSSLTGHKKVLSREKGHQ-CHECGKAFQRSSHLVR 146
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 51,295,346
Number of Sequences: 237096
Number of extensions: 973253
Number of successful extensions: 3446
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 3158
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3432
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 2084089752
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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