Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0007_G02
(603 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_07_0194 + 28327328-28327376,28327699-28327742,28327852-283279... 289 2e-78
01_06_0109 - 26526691-26526775,26526894-26527019,26527228-265273... 288 2e-78
01_01_1031 + 8169505-8169553,8169831-8169905,8170395-8170438,817... 261 3e-70
04_04_0457 + 25359486-25359571,25360690-25360782,25361561-253616... 124 4e-51
11_01_0623 - 4998236-4999606 30 1.6
12_02_0129 - 13981684-13982529 29 2.8
12_02_0112 + 13783758-13784717 29 2.8
10_01_0316 + 3479574-3482679,3482766-3483127 29 2.8
08_02_0191 + 14041201-14043894,14044354-14044632 29 3.7
08_02_0137 - 13049872-13050893,13051022-13051175 29 3.7
10_01_0318 + 3493913-3496976,3497064-3497392 28 5.0
07_01_0842 + 6840943-6841288,6841800-6841970,6842762-6842832,684... 28 5.0
05_05_0377 - 24498664-24500215,24500306-24500643 28 6.5
02_01_0500 - 3623837-3624019,3624591-3624778,3625209-3626147,362... 28 6.5
01_01_0009 + 57658-60086,60855-60935,61094-61295,61385-61905,619... 28 6.5
11_06_0632 + 25674807-25675477,25676472-25677861,25677948-256780... 27 8.7
03_01_0274 - 2114076-2115506,2117897-2118114,2118251-2118371 27 8.7
01_06_1466 + 37559600-37559795,37560597-37560730,37561252-375614... 27 8.7
01_06_0951 + 33301850-33302175,33302318-33303216,33303327-33303934 27 8.7
>05_07_0194 +
28327328-28327376,28327699-28327742,28327852-28327961,
28328250-28328287,28328371-28328448,28328527-28328580,
28328663-28328764,28329152-28329237,28329327-28329430,
28329542-28329610,28329689-28329804,28329949-28329983,
28330152-28330294,28330473-28330598,28330700-28330784
Length = 412
Score = 289 bits (708), Expect = 2e-78
Identities = 131/200 (65%), Positives = 156/200 (78%)
Frame = +2
Query: 2 IIWAKIKEKLIFPYVKLDCLYYDLGLPHRDATDDQVTIDAAHAILKHNVGIKCATITPDE 181
+ W IK+KLIFP+++LD Y+DLGLP+RD TDD+VT++AA A LK+NV IKCATITPDE
Sbjct: 23 VFWKSIKDKLIFPFLELDIKYFDLGLPYRDQTDDKVTVEAAEATLKYNVAIKCATITPDE 82
Query: 182 QRVEEFKLKKMWLSPNGTIRNILGGTVFREPILCKSIPRVVPGWTKAIVIGRHAHGDQYK 361
RV+EF LK MW SPNGTIRNIL GTVFREPI+CK+IPR+VPGWTK I IGRHA GDQY+
Sbjct: 83 ARVKEFSLKSMWKSPNGTIRNILNGTVFREPIICKNIPRLVPGWTKPICIGRHAFGDQYR 142
Query: 362 AQDFVVPKPGKVELVYTAEDGTTEKRLLYDFKTPGVVLGMYNIDESIRAFAHSSFQVALQ 541
A D V+ PGK++LVY +D E + GV MYN DESIR+FA +S A +
Sbjct: 143 ATDAVIKGPGKLKLVYEGKDEEIELEVFNFTGAGGVAQSMYNTDESIRSFAEASMATAYE 202
Query: 542 KKWPLYLSTKNTILKRYDGR 601
KKWPLYLSTKNTILK+YDGR
Sbjct: 203 KKWPLYLSTKNTILKKYDGR 222
>01_06_0109 -
26526691-26526775,26526894-26527019,26527228-26527370,
26527521-26527555,26527676-26527791,26527868-26527936,
26528070-26528173,26528253-26528338,26528429-26528530,
26528609-26528662,26528763-26528840,26528936-26528973,
26529235-26529344,26529463-26529506,26530232-26530280
Length = 412
Score = 288 bits (707), Expect = 2e-78
Identities = 131/200 (65%), Positives = 157/200 (78%)
Frame = +2
Query: 2 IIWAKIKEKLIFPYVKLDCLYYDLGLPHRDATDDQVTIDAAHAILKHNVGIKCATITPDE 181
I W IK+KLIFP++ LD YYDLG+ HRDATDD+VT++AA A LK+NV IKCATITPDE
Sbjct: 23 IFWQSIKDKLIFPFLDLDIKYYDLGVLHRDATDDKVTVEAAEATLKYNVAIKCATITPDE 82
Query: 182 QRVEEFKLKKMWLSPNGTIRNILGGTVFREPILCKSIPRVVPGWTKAIVIGRHAHGDQYK 361
RV+EF LK+MW SPNGTIRNI+ GTVFREPI+CK++PR+VPGWTK I IGRHA GDQY+
Sbjct: 83 ARVKEFNLKQMWKSPNGTIRNIINGTVFREPIICKNVPRLVPGWTKPICIGRHAFGDQYR 142
Query: 362 AQDFVVPKPGKVELVYTAEDGTTEKRLLYDFKTPGVVLGMYNIDESIRAFAHSSFQVALQ 541
A D V+ PGK++LV+ +D + + GV L MYN DESIRAFA +S A +
Sbjct: 143 ATDAVLKGPGKLKLVFEGKDEQIDLEVFNFTGAGGVALSMYNTDESIRAFAEASMTTAYE 202
Query: 542 KKWPLYLSTKNTILKRYDGR 601
KKWPLYLSTKNTILK+YDGR
Sbjct: 203 KKWPLYLSTKNTILKKYDGR 222
>01_01_1031 +
8169505-8169553,8169831-8169905,8170395-8170438,
8170633-8170742,8170960-8170997,8171055-8171186,
8171298-8171351,8171424-8171525,8172679-8172764,
8172870-8172973,8173056-8173124,8173156-8173209,
8173210-8173325,8173420-8173454,8173637-8173779,
8174105-8174227,8174305-8174398
Length = 475
Score = 261 bits (640), Expect = 3e-70
Identities = 130/218 (59%), Positives = 154/218 (70%), Gaps = 18/218 (8%)
Frame = +2
Query: 2 IIWAKIKEKLIFPYVKLDCLYYDLGLPHRDATDDQVTIDAAHAILKHNVGIKCATITP-- 175
+IW IK+KLIFP++ LD YYDLGLP+RDAT D+VTI++A A LK+NV IKCATITP
Sbjct: 48 VIWKWIKDKLIFPFLDLDIKYYDLGLPNRDATGDKVTIESAEATLKYNVAIKCATITPVL 107
Query: 176 ----------------DEQRVEEFKLKKMWLSPNGTIRNILGGTVFREPILCKSIPRVVP 307
DE RV+EF L MW SPNGTIRNIL GTVFREPI+CK+IPR+VP
Sbjct: 108 DTQFKFDFGRTIHEPTDEGRVKEFNLSAMWKSPNGTIRNILNGTVFREPIICKNIPRLVP 167
Query: 308 GWTKAIVIGRHAHGDQYKAQDFVVPKPGKVELVYTAEDGTTEKRLLYDFKTPGVVLGMYN 487
GW K I IGRHA GDQY+A D V+ PGK++LV+ + E + GV L MYN
Sbjct: 168 GWIKPICIGRHAFGDQYRATDTVIKGPGKLKLVFDGREEQIELDVFNFTGAGGVALSMYN 227
Query: 488 IDESIRAFAHSSFQVALQKKWPLYLSTKNTILKRYDGR 601
DESI AFA +S +A QK+WPLYLSTKNTILK+YDGR
Sbjct: 228 TDESIWAFAEASMNMAYQKRWPLYLSTKNTILKKYDGR 265
>04_04_0457 +
25359486-25359571,25360690-25360782,25361561-25361622,
25361758-25361816,25363624-25363733,25364795-25364829,
25365469-25365546,25365952-25366005,25366277-25366362,
25366468-25366571,25366986-25367054,25367135-25367250,
25367387-25367421,25367512-25367654,25367808-25367930,
25368463-25368556
Length = 448
Score = 124 bits (300), Expect(2) = 4e-51
Identities = 59/94 (62%), Positives = 74/94 (78%)
Frame = +2
Query: 23 EKLIFPYVKLDCLYYDLGLPHRDATDDQVTIDAAHAILKHNVGIKCATITPDEQRVEEFK 202
+ LIFPY++LD Y+DLGL +RDATDD+VT+++A A L T+T DE RV+EFK
Sbjct: 99 DDLIFPYLELDVKYFDLGLLNRDATDDKVTVESAEATLDLYSNSFFMTLT-DETRVKEFK 157
Query: 203 LKKMWLSPNGTIRNILGGTVFREPILCKSIPRVV 304
LK MW SPNGTIRNIL GTVFREPILCK++PR++
Sbjct: 158 LKSMWRSPNGTIRNILNGTVFREPILCKNVPRIL 191
Score = 94.7 bits (225), Expect(2) = 4e-51
Identities = 45/70 (64%), Positives = 52/70 (74%), Gaps = 1/70 (1%)
Frame = +2
Query: 395 VELVYTAEDGTTEKRL-LYDFKTPGVVLGMYNIDESIRAFAHSSFQVALQKKWPLYLSTK 571
V + + DG L +Y+FK PGV L MYN+DESIRAFA SS +AL KKWPLYLSTK
Sbjct: 187 VPRILSVPDGAEPVELNVYNFKGPGVALSMYNVDESIRAFAESSMAMALSKKWPLYLSTK 246
Query: 572 NTILKRYDGR 601
NTILK+YDGR
Sbjct: 247 NTILKKYDGR 256
>11_01_0623 - 4998236-4999606
Length = 456
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +2
Query: 56 CLYYDLGLPHRDATDDQVTIDAAHAILKHNVGI 154
C YYD G+ H +DD V + A A+ VG+
Sbjct: 22 CYYYDPGIAHIKFSDDHVMVPARVAMAHSLVGV 54
>12_02_0129 - 13981684-13982529
Length = 281
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +2
Query: 65 YDLGLPHRDATDDQVTIDAAHAILKHNVGIKCATITP 175
+D GL HRD D V +DA + ++G+ +T +P
Sbjct: 95 HDAGLMHRDLKPDNVLVDARGNLKICDLGLSQSTASP 131
>12_02_0112 + 13783758-13784717
Length = 319
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +2
Query: 65 YDLGLPHRDATDDQVTIDAAHAILKHNVGIKCATITP 175
+D GL HRD D V +DA + ++G+ +T +P
Sbjct: 133 HDAGLMHRDLKPDNVLVDARGNLKICDLGLSQSTASP 169
>10_01_0316 + 3479574-3482679,3482766-3483127
Length = 1155
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +2
Query: 233 TIRNILGGTVFREPILCKSIPRVVPGWTKAIVIGRHAHGDQYKAQ 367
++RN+ E + + I R W++ VIGR HG Y+ +
Sbjct: 842 SMRNLDSTEELPEDLTYEDILRATDNWSEKYVIGRGRHGTVYRTE 886
>08_02_0191 + 14041201-14043894,14044354-14044632
Length = 990
Score = 28.7 bits (61), Expect = 3.7
Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = -1
Query: 306 GTTLGILLHSMGSRNTVPPRMLRIV-PFGLSHI 211
G+ L LLH R PPR L+IV P GLS +
Sbjct: 655 GSNLVTLLHVRKDRQQPPPRPLQIVFPIGLSGV 687
>08_02_0137 - 13049872-13050893,13051022-13051175
Length = 391
Score = 28.7 bits (61), Expect = 3.7
Identities = 19/58 (32%), Positives = 31/58 (53%)
Frame = -3
Query: 313 PSGYYPRYTLTQYGLTEYSPTEDVTNCSIWTQPHLFQFELFNSLFIRSDSGTFDADIM 140
P+GY PR+T + T SP ++ T+ + W P Q+ NS RS S + +A ++
Sbjct: 325 PTGYAPRWTQAPHHNTGGSPRQN-TSENRWQAPQDVQWGNMNS---RSPSSSGNASVL 378
>10_01_0318 + 3493913-3496976,3497064-3497392
Length = 1130
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +2
Query: 233 TIRNILGGTVFREPILCKSIPRVVPGWTKAIVIGRHAHGDQYKAQ 367
++RN+ E + + I R W++ VIGR HG Y+ +
Sbjct: 828 SVRNMDSTEELPEELTYEDILRGTDNWSEKYVIGRGRHGTVYRTE 872
>07_01_0842 +
6840943-6841288,6841800-6841970,6842762-6842832,
6843068-6843187,6843654-6843772,6844045-6844126,
6844254-6844259
Length = 304
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 281 CKSIPRVVPGWTKAIVIGRHAHGDQYKAQDFVVPKP 388
CK R G + GR AHG ++ +D+V+P P
Sbjct: 56 CKDAAREEQGAGPLPLKGREAHGRCHRRRDYVMPLP 91
>05_05_0377 - 24498664-24500215,24500306-24500643
Length = 629
Score = 27.9 bits (59), Expect = 6.5
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = -1
Query: 228 FGLSHIFFSLNSSTLCSSGVIVAHLMPTLCF 136
+ S +F LN + +C + L+PT+C+
Sbjct: 343 YASSECYFGLNLNPMCKPSEVAYTLIPTMCY 373
>02_01_0500 -
3623837-3624019,3624591-3624778,3625209-3626147,
3626311-3626479,3626701-3626871,3626948-3627016,
3627094-3627201,3627844-3627997,3628659-3628738,
3628822-3628914,3628951-3629073,3629165-3629915,
3630123-3630163,3630338-3630385
Length = 1038
Score = 27.9 bits (59), Expect = 6.5
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -3
Query: 334 SDHNGLSPSGYYPRYTLTQYGLTEYSP 254
SD++GL P+G YPR ++ G + P
Sbjct: 908 SDNDGLDPTGEYPRRGPSEMGSMPFPP 934
>01_01_0009 + 57658-60086,60855-60935,61094-61295,61385-61905,
61996-62114,62248-62345
Length = 1149
Score = 27.9 bits (59), Expect = 6.5
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = -3
Query: 160 TFDADIMFQYGVSRVNRHLIVSSVTVRQTQIIVKAVQLNIREN 32
+F AD++F Y V RHL + + +T+ V ++ + E+
Sbjct: 919 SFVADVLFPYARDNVRRHLAATYGSSEETRADVALLRAQVEED 961
>11_06_0632 +
25674807-25675477,25676472-25677861,25677948-25678083,
25678185-25678282,25678470-25678535,25678699-25678827,
25679570-25679746,25680576-25680614
Length = 901
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -1
Query: 477 PRTTPGVLKSYKRRFSVVPSSAVYTSSTFP 388
PR+TP SY F PS+A T+++ P
Sbjct: 40 PRSTPAPAPSYDGLFGAPPSAAATTTTSSP 69
>03_01_0274 - 2114076-2115506,2117897-2118114,2118251-2118371
Length = 589
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +3
Query: 393 RWSSCTLLKTVQQKNVFCTILKLPALFWACTI 488
RWS CT+ + + K + I L +F CT+
Sbjct: 315 RWSLCTVTQVEETKQIVKVIPLLATMFVPCTL 346
>01_06_1466 +
37559600-37559795,37560597-37560730,37561252-37561437,
37562538-37562753,37563008-37563119,37563493-37563663,
37564621-37564684,37565555-37565685,37566263-37566393,
37566843-37566945,37567322-37567398,37567813-37567860,
37568162-37568311,37568810-37569010
Length = 639
Score = 27.5 bits (58), Expect = 8.7
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = -1
Query: 516 WANARIDSSILYMPRTTPGVLKSYKRRFSVVPSSAVYTSSTFPGFGTTKS 367
W + +S + VL+S RFS + + SS PGFG +KS
Sbjct: 23 WRAEAVGASSSFAEGMGEFVLRSMDARFSGSADADGFPSSRHPGFGHSKS 72
>01_06_0951 + 33301850-33302175,33302318-33303216,33303327-33303934
Length = 610
Score = 27.5 bits (58), Expect = 8.7
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = -1
Query: 228 FGLSHIFFSLNSSTLCSSGVIVAHLMPTLCF 136
+ S +F LN + +C + L+PT+C+
Sbjct: 338 YASSECYFGLNLNPMCKPSDVAYTLIPTMCY 368
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,234,206
Number of Sequences: 37544
Number of extensions: 382896
Number of successful extensions: 971
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 951
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 969
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1431112012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -