Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0007_G02
         (603 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81479-7|CAB03943.1|  435|Caenorhabditis elegans Hypothetical pr...   309   9e-85
Z68343-3|CAA92778.1|  412|Caenorhabditis elegans Hypothetical pr...   309   1e-84
AF077542-12|AAC26293.1|  169|Caenorhabditis elegans Hypothetical...    32   0.36 
Z74472-6|CAA98947.1| 1025|Caenorhabditis elegans Hypothetical pr...    29   3.4  
AF162673-1|AAF80461.1|  568|Caenorhabditis elegans CNT-like nucl...    28   4.5  
AF016413-5|AAB65255.1|  568|Caenorhabditis elegans Hypothetical ...    28   4.5  
AF045645-3|AAC02610.2|  193|Caenorhabditis elegans Hypothetical ...    28   5.9  
Z81576-1|CAB04643.2|  312|Caenorhabditis elegans Hypothetical pr...    27   7.8  
Z81525-3|CAB04258.1|  467|Caenorhabditis elegans Hypothetical pr...    27   7.8  
U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical pr...    27   7.8  

>Z81479-7|CAB03943.1|  435|Caenorhabditis elegans Hypothetical
           protein C34F6.8 protein.
          Length = 435

 Score =  309 bits (759), Expect = 9e-85
 Identities = 142/201 (70%), Positives = 164/201 (81%), Gaps = 1/201 (0%)
 Frame = +2

Query: 2   IIWAKIKEKLIFPYVKLDCLYYDLGLPHRDATDDQVTIDAAHAILKHNVGIKCATITPDE 181
           IIW +IK KLI PY+ LD  YYDLGL +RD T+DQVTIDAAHAIL+H+VGIKCATITPDE
Sbjct: 44  IIWKEIKNKLILPYLDLDIKYYDLGLEYRDETNDQVTIDAAHAILEHSVGIKCATITPDE 103

Query: 182 QRVEEFKLKKMWLSPNGTIRNILGGTVFREPILCKSIPRVVPGWTKAIVIGRHAHGDQYK 361
            R++EF LKKMWLSPNGTIRNILGGTVFREPILCK+IPR+VPGWT+ I IGRHA GDQYK
Sbjct: 104 ARIKEFNLKKMWLSPNGTIRNILGGTVFREPILCKNIPRLVPGWTQPITIGRHAFGDQYK 163

Query: 362 AQDFVVPKPGKVELVYTAEDGTTEKRLLYDF-KTPGVVLGMYNIDESIRAFAHSSFQVAL 538
             D V+P    ++L+    DG+ +   +YDF K+ GV L MYN DESI+ FAHS FQ AL
Sbjct: 164 CTDLVIPSGSTLQLLVNKPDGSKDVHNVYDFKKSGGVGLAMYNTDESIKGFAHSCFQYAL 223

Query: 539 QKKWPLYLSTKNTILKRYDGR 601
            K+WPLYLSTKNTILK+YDGR
Sbjct: 224 MKQWPLYLSTKNTILKKYDGR 244


>Z68343-3|CAA92778.1|  412|Caenorhabditis elegans Hypothetical
           protein F59B8.2 protein.
          Length = 412

 Score =  309 bits (758), Expect = 1e-84
 Identities = 143/201 (71%), Positives = 169/201 (84%), Gaps = 1/201 (0%)
 Frame = +2

Query: 2   IIWAKIKEKLIFPYVKLDCLYYDLGLPHRDATDDQVTIDAAHAILKHNVGIKCATITPDE 181
           IIW  IKEKLI PYV L+  ++DLG+ HRDATDDQVTIDAA+A LK+NV +KCATITPDE
Sbjct: 22  IIWDLIKEKLILPYVDLNVHFFDLGIEHRDATDDQVTIDAANATLKYNVAVKCATITPDE 81

Query: 182 QRVEEFKLKKMWLSPNGTIRNILGGTVFREPILCKSIPRVVPGWTKAIVIGRHAHGDQYK 361
            RVEEFKLKKMW SPNGTIRNILGGTVFREPI+ K++PR+V  W+K I+IGRHAH DQYK
Sbjct: 82  ARVEEFKLKKMWKSPNGTIRNILGGTVFREPIIVKNVPRLVNTWSKPIIIGRHAHADQYK 141

Query: 362 AQDFVVPKPGKVELVYTAEDGT-TEKRLLYDFKTPGVVLGMYNIDESIRAFAHSSFQVAL 538
           A DFVVP  GK+E+ + + DGT T +  ++DFK PGV L MYN D+SIR FAH+SF+ AL
Sbjct: 142 ATDFVVPGAGKLEIKFVSADGTQTIQETVFDFKGPGVSLSMYNTDDSIRDFAHASFKYAL 201

Query: 539 QKKWPLYLSTKNTILKRYDGR 601
           Q+K+PLYLSTKNTILK+YDGR
Sbjct: 202 QRKFPLYLSTKNTILKKYDGR 222


>AF077542-12|AAC26293.1|  169|Caenorhabditis elegans Hypothetical
           protein Y57G7A.9 protein.
          Length = 169

 Score = 31.9 bits (69), Expect = 0.36
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = +2

Query: 98  DDQVTIDAAHAILKHNVGIKCATITPDEQRVE 193
           +DQ   +  H I K N GI+CA + P+ Q  E
Sbjct: 29  NDQYFQEVIHRICKRNEGIRCAMLAPNAQHAE 60


>Z74472-6|CAA98947.1| 1025|Caenorhabditis elegans Hypothetical
           protein F23H12.6 protein.
          Length = 1025

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 23/87 (26%), Positives = 36/87 (41%), Gaps = 2/87 (2%)
 Frame = +2

Query: 2   IIWAKIKEKLIFPYVKLDCLYYDLGLPHRDATDDQ--VTIDAAHAILKHNVGIKCATITP 175
           +IW     KL  P  + +C Y     P     D    V I A   +L        A +  
Sbjct: 404 LIWDAYNGKL--PQTRPECGYSGKSCPVNFFVDYLYIVVIVAVIIVLCCAAAAIAAFLVI 461

Query: 176 DEQRVEEFKLKKMWLSPNGTIRNILGG 256
             +R EE +L   W+ P+G +++I+ G
Sbjct: 462 KARRDEELRLDDQWIVPHGMLQSIIKG 488


>AF162673-1|AAF80461.1|  568|Caenorhabditis elegans CNT-like
           nucleoside transporter protein.
          Length = 568

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +1

Query: 487 YRRIYTGVCPF*FPGGLAEKMAFIFIYKEY 576
           Y+RIY  +CPF  P  +   +AF+ +Y  Y
Sbjct: 30  YQRIYQKICPFIGPAAI---VAFLLVYHGY 56


>AF016413-5|AAB65255.1|  568|Caenorhabditis elegans Hypothetical
           protein F27E11.1 protein.
          Length = 568

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +1

Query: 487 YRRIYTGVCPF*FPGGLAEKMAFIFIYKEY 576
           Y+RIY  +CPF  P  +   +AF+ +Y  Y
Sbjct: 30  YQRIYQKICPFIGPAAI---VAFLLVYHGY 56


>AF045645-3|AAC02610.2|  193|Caenorhabditis elegans Hypothetical
           protein K02D7.2 protein.
          Length = 193

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = -3

Query: 553 RPFFLQGHLETRMGKRPY 500
           RP+ L+GHL T  G++P+
Sbjct: 107 RPWLLKGHLRTHTGEKPF 124


>Z81576-1|CAB04643.2|  312|Caenorhabditis elegans Hypothetical
           protein R10E8.1 protein.
          Length = 312

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 16/50 (32%), Positives = 24/50 (48%)
 Frame = +2

Query: 8   WAKIKEKLIFPYVKLDCLYYDLGLPHRDATDDQVTIDAAHAILKHNVGIK 157
           W +IK  LI  ++    L + L LP    T   +TI     + KH +G+K
Sbjct: 182 WKRIKSLLIEGFIVSAPLEHFLHLPEVTITMQSITIFNLKLLKKHFLGLK 231


>Z81525-3|CAB04258.1|  467|Caenorhabditis elegans Hypothetical
           protein F33A8.4 protein.
          Length = 467

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 20/74 (27%), Positives = 30/74 (40%), Gaps = 2/74 (2%)
 Frame = -3

Query: 448 VQKTFFCCTVFSSVHELHLSRFRYNEVLRLILI--AVRVTSDHNGLSPSGYYPRYTLTQY 275
           V++TFF C ++ +  E    +  +N+    I +  AV    D            Y     
Sbjct: 99  VEETFFACAIYRNQAEFCDFKLTFNKETGEIEVKEAVEGEEDAEKKKKKKKIFGYNRIPK 158

Query: 274 GLTEYSPTEDVTNC 233
            LTE SPT+ V  C
Sbjct: 159 ALTEMSPTDTVLYC 172


>U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical protein
            B0207.5 protein.
          Length = 3279

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = +2

Query: 137  KHNVGIKCATITPDEQRVEEFKLKKMWLSPNGTIRNI 247
            KH    +  T+ PDE+ VE  KL K    PN T+R +
Sbjct: 2208 KHPHSYRTKTV-PDEEPVEIVKLVKNRRLPNATLREV 2243


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,627,809
Number of Sequences: 27780
Number of extensions: 328993
Number of successful extensions: 868
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 843
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 865
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1289949676
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)