Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0007_F21
(367 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 204 2e-53
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 196 3e-51
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 193 4e-50
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 193 4e-50
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 189 5e-49
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 188 1e-48
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 132 6e-32
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 132 6e-32
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 91 2e-19
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 90 4e-19
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 90 4e-19
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 90 4e-19
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 88 2e-18
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 88 2e-18
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 86 8e-18
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 86 8e-18
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 86 8e-18
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 85 1e-17
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 85 1e-17
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 85 1e-17
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 85 1e-17
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 84 3e-17
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 78 2e-15
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 74 3e-14
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 74 3e-14
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 69 1e-12
U41105-5|AAA82398.1| 390|Caenorhabditis elegans Hypothetical pr... 29 1.3
Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical pr... 28 2.4
U00043-5|AAN65292.1| 505|Caenorhabditis elegans Hypothetical pr... 26 7.2
U00043-4|AAN65291.1| 1076|Caenorhabditis elegans Hypothetical pr... 26 7.2
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 204 bits (498), Expect = 2e-53
Identities = 91/96 (94%), Positives = 95/96 (98%)
Frame = +1
Query: 79 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 258
MREIVHIQAGQCGNQIGAKFWE+ISDEHGIDPTGAY+GDSDLQLERINVYYNEASGGKYV
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQLERINVYYNEASGGKYV 60
Query: 259 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSG 366
PRA LVDLEPGTMDSVR+GPFGQ+FRPDNFVFGQSG
Sbjct: 61 PRACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSG 96
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 196 bits (479), Expect = 3e-51
Identities = 86/96 (89%), Positives = 92/96 (95%)
Frame = +1
Query: 79 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 258
MREIVH+QAGQCGNQIGAKFWE+ISDEHGI P G Y G+SDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQLERINVYYNEANGGKYV 60
Query: 259 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSG 366
PRA+LVDLEPGTMDSVRSGPFGQ+FRPDNFVFGQSG
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSG 96
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 193 bits (470), Expect = 4e-50
Identities = 85/96 (88%), Positives = 91/96 (94%)
Frame = +1
Query: 79 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 258
MREIVHIQAGQCGNQIG+KFWE+ISDEHGIDP+G Y GDSDLQLERINVYYNEA KYV
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNKYV 60
Query: 259 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSG 366
PRA+LVDLEPGTMDSVRSGPFGQ+FRPDN+VFGQSG
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSG 96
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 193 bits (470), Expect = 4e-50
Identities = 85/96 (88%), Positives = 91/96 (94%)
Frame = +1
Query: 79 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 258
MREIVHIQAGQCGNQIG+KFWE+ISDEHGIDP+G Y GDSDLQLERINVYYNEA KYV
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNKYV 60
Query: 259 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSG 366
PRA+LVDLEPGTMDSVRSGPFGQ+FRPDN+VFGQSG
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSG 96
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 189 bits (461), Expect = 5e-49
Identities = 82/96 (85%), Positives = 91/96 (94%)
Frame = +1
Query: 79 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 258
MREIVH+QAGQCGNQIG+KFWE+ISDEHGI P G + G+SDLQLERI+VYYNEA+ GKYV
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQLERIDVYYNEANNGKYV 60
Query: 259 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSG 366
PRA+LVDLEPGTMDSVRSGPFGQ+FRPDNFVFGQSG
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSG 96
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 188 bits (458), Expect = 1e-48
Identities = 81/96 (84%), Positives = 91/96 (94%)
Frame = +1
Query: 79 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 258
MREIVH+QAGQCGNQIG+KFWE+ISDEHGI P G + G++DLQLERI+VYYNEA+ GKYV
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQLERIDVYYNEANNGKYV 60
Query: 259 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSG 366
PRA+LVDLEPGTMDSVRSGPFGQ+FRPDNFVFGQSG
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSG 96
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 132 bits (320), Expect = 6e-32
Identities = 58/96 (60%), Positives = 74/96 (77%)
Frame = +1
Query: 79 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 258
M+EI+++Q GQCGNQIGAKFWE IS+EHG+ G Y GD+ QLERI YY E G KYV
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYV 60
Query: 259 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSG 366
PRAILVDL+P +++ VRS +G++F P+N V G+SG
Sbjct: 61 PRAILVDLDPESINYVRSTQYGKLFDPENAVSGESG 96
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 132 bits (320), Expect = 6e-32
Identities = 58/96 (60%), Positives = 74/96 (77%)
Frame = +1
Query: 79 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 258
M+EI+++Q GQCGNQIGAKFWE IS+EHG+ G Y GD+ QLERI YY E G KYV
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYV 60
Query: 259 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSG 366
PRAILVDL+P +++ VRS +G++F P+N V G+SG
Sbjct: 61 PRAILVDLDPESINYVRSTQYGKLFDPENAVSGESG 96
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 91.5 bits (217), Expect = 2e-19
Identities = 44/101 (43%), Positives = 62/101 (61%), Gaps = 4/101 (3%)
Frame = +1
Query: 70 KYK-MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL---QLERINVYYNE 237
+YK RE++ I GQ G QIG WE+ EHGI P G YH + D + E IN ++ E
Sbjct: 3 QYKGSREVISIHVGQAGVQIGNACWELFCLEHGIQPDG-YHVEDDTYDEETETINTFFAE 61
Query: 238 ASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ 360
+GGK+VPR + VDLEP +D VR+G + +F P+ + G+
Sbjct: 62 TAGGKHVPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGK 102
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 90.2 bits (214), Expect = 4e-19
Identities = 37/94 (39%), Positives = 55/94 (58%)
Frame = +1
Query: 79 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 258
MRE++ I GQ G QIG WE+ EHGI P G D E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYV 60
Query: 259 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ 360
PR+I VDLEP +D +R+G + ++F P+ + G+
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGK 94
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 90.2 bits (214), Expect = 4e-19
Identities = 43/96 (44%), Positives = 58/96 (60%), Gaps = 2/96 (2%)
Frame = +1
Query: 79 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLE--RINVYYNEASGGK 252
MREIV I GQ G QIG WE+ EHGI P G D+ +E N +++E GK
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGK 60
Query: 253 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ 360
+VPRAI VDLEP +D VR+G + ++F P+ + G+
Sbjct: 61 HVPRAIFVDLEPTVIDEVRTGTYAKLFHPEQLISGK 96
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 90.2 bits (214), Expect = 4e-19
Identities = 37/94 (39%), Positives = 55/94 (58%)
Frame = +1
Query: 79 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 258
MRE++ I GQ G QIG WE+ EHGI P G D E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYV 60
Query: 259 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ 360
PR+I VDLEP +D +R+G + ++F P+ + G+
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGK 94
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 88.2 bits (209), Expect = 2e-18
Identities = 37/94 (39%), Positives = 56/94 (59%)
Frame = +1
Query: 79 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 258
MRE++ I GQ G QIG WE+ EHGI P G S + E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYV 60
Query: 259 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ 360
PR+I VDLEP +D +R+G + ++F P+ + G+
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGK 94
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 88.2 bits (209), Expect = 2e-18
Identities = 37/94 (39%), Positives = 56/94 (59%)
Frame = +1
Query: 79 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 258
MRE++ I GQ G QIG WE+ EHGI P G S + E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYV 60
Query: 259 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ 360
PR+I VDLEP +D +R+G + ++F P+ + G+
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGK 94
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 85.8 bits (203), Expect = 8e-18
Identities = 37/96 (38%), Positives = 57/96 (59%), Gaps = 2/96 (2%)
Frame = +1
Query: 79 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 252
MRE++ I GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 253 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ 360
+VPRA++VDLEP +D +R+G + +F P+ + G+
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGK 96
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 85.8 bits (203), Expect = 8e-18
Identities = 37/96 (38%), Positives = 57/96 (59%), Gaps = 2/96 (2%)
Frame = +1
Query: 79 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 252
MRE++ I GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 253 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ 360
+VPRA++VDLEP +D +R+G + +F P+ + G+
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGK 96
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 85.8 bits (203), Expect = 8e-18
Identities = 37/96 (38%), Positives = 57/96 (59%), Gaps = 2/96 (2%)
Frame = +1
Query: 79 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 252
MRE++ I GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 253 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ 360
+VPRA++VDLEP +D +R+G + +F P+ + G+
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGK 96
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 85.4 bits (202), Expect = 1e-17
Identities = 38/94 (40%), Positives = 57/94 (60%), Gaps = 1/94 (1%)
Frame = +1
Query: 82 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAY-HGDSDLQLERINVYYNEASGGKYV 258
RE V I GQ G QIG WE+ EHG+D G + + + + + +++E+ GK+V
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEKNKKQQSLQAFFSESMNGKHV 65
Query: 259 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ 360
PRAI VDLEP +D +R+G +G +F PD + G+
Sbjct: 66 PRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGK 99
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 85.4 bits (202), Expect = 1e-17
Identities = 35/94 (37%), Positives = 55/94 (58%)
Frame = +1
Query: 79 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 258
MRE++ I GQ G QIG WE+ EHGI P G + + ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYV 60
Query: 259 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ 360
PR+I VDLEP +D +R+G + ++F P+ + G+
Sbjct: 61 PRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGK 94
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 85.4 bits (202), Expect = 1e-17
Identities = 35/94 (37%), Positives = 55/94 (58%)
Frame = +1
Query: 79 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 258
MRE++ I GQ G QIG WE+ EHGI P G + + ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYV 60
Query: 259 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ 360
PR+I VDLEP +D +R+G + ++F P+ + G+
Sbjct: 61 PRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGK 94
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 85.0 bits (201), Expect = 1e-17
Identities = 37/97 (38%), Positives = 59/97 (60%), Gaps = 2/97 (2%)
Frame = +1
Query: 76 KMREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLE--RINVYYNEASGG 249
+ RE++ I GQ G Q+G WE+ EHGI P G + + L ++ N +++E G
Sbjct: 5 RSREVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMAG 64
Query: 250 KYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ 360
K+VPRAI+VDLEP +D +R+G + +F P+ + G+
Sbjct: 65 KHVPRAIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGK 101
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 83.8 bits (198), Expect = 3e-17
Identities = 36/95 (37%), Positives = 56/95 (58%), Gaps = 2/95 (2%)
Frame = +1
Query: 82 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 255
RE++ I GQ G QIG WE+ EHGI P G D L + + +++E G++
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRH 60
Query: 256 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ 360
VPRA++VDLEP +D +R+G + +F P+ + G+
Sbjct: 61 VPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGK 95
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 77.8 bits (183), Expect = 2e-15
Identities = 35/94 (37%), Positives = 56/94 (59%)
Frame = +1
Query: 79 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 258
MRE++ I GQ G QIG WE+ EHGI P G + D + ++++ G++V
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDGTSM-EPDGNSGSLGTFFSDTGYGRHV 59
Query: 259 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ 360
PR+I VDLEP +D +R+G + ++F P+ + G+
Sbjct: 60 PRSIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGK 93
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 74.1 bits (174), Expect = 3e-14
Identities = 34/94 (36%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Frame = +1
Query: 88 IVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRA 267
++ + GQCGNQ+ FW+ + DEHGI+ G + D+ ++ ++Y +A YVPRA
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFY-QADDDHYVPRA 65
Query: 268 ILVDLEPGTMDSVRSGP-FGQIFRPDNFVFGQSG 366
+LVDLEP ++ + P F +F DN G
Sbjct: 66 VLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHG 99
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 74.1 bits (174), Expect = 3e-14
Identities = 34/94 (36%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Frame = +1
Query: 88 IVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRA 267
++ + GQCGNQ+ FW+ + DEHGI+ G + D+ ++ ++Y +A YVPRA
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFY-QADDDHYVPRA 65
Query: 268 ILVDLEPGTMDSVRSGP-FGQIFRPDNFVFGQSG 366
+LVDLEP ++ + P F +F DN G
Sbjct: 66 VLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHG 99
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 68.5 bits (160), Expect = 1e-12
Identities = 31/71 (43%), Positives = 45/71 (63%), Gaps = 3/71 (4%)
Frame = +1
Query: 157 EHGIDPTGAYHGDSDL---QLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQ 327
EHGI P G YH + D + E IN ++ E +GGK+VPR + VDLEP +D VR+G +
Sbjct: 5 EHGIQPDG-YHVEDDTYDEETETINTFFAETAGGKHVPRCLFVDLEPTVVDEVRTGTYRS 63
Query: 328 IFRPDNFVFGQ 360
+F P+ + G+
Sbjct: 64 LFHPEQLLSGK 74
>U41105-5|AAA82398.1| 390|Caenorhabditis elegans Hypothetical
protein T02G5.7 protein.
Length = 390
Score = 28.7 bits (61), Expect = 1.3
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Frame = -2
Query: 261 GHVLASGGLIVINIDALKL---QVRIAVVCTGGVDAVLV 154
GH L GL ++N A L Q+ +A +C GG +A V
Sbjct: 347 GHPLGMSGLRIVNSLAYSLAPGQLGVAAICNGGGEATAV 385
>Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical
protein K01A6.2 protein.
Length = 1092
Score = 27.9 bits (59), Expect = 2.4
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +1
Query: 145 IISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDL 282
I S+ H I T + H DS R + GG + R IL+D+
Sbjct: 101 IASEHHHISTTSSCHSDSGNSSSRDVITPFTVHGGASIGRLILIDI 146
>U00043-5|AAN65292.1| 505|Caenorhabditis elegans Hypothetical
protein T26A5.5b protein.
Length = 505
Score = 26.2 bits (55), Expect = 7.2
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +1
Query: 211 ERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRP-DNFVFG 357
E I + A GK V + + LEPG + SG ++ P D+ VFG
Sbjct: 196 EFIKTVNDNAFFGKSVEKCHVAILEPGDTMLIPSGWIHAVYTPDDSLVFG 245
>U00043-4|AAN65291.1| 1076|Caenorhabditis elegans Hypothetical
protein T26A5.5a protein.
Length = 1076
Score = 26.2 bits (55), Expect = 7.2
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +1
Query: 211 ERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRP-DNFVFG 357
E I + A GK V + + LEPG + SG ++ P D+ VFG
Sbjct: 196 EFIKTVNDNAFFGKSVEKCHVAILEPGDTMLIPSGWIHAVYTPDDSLVFG 245
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,569,358
Number of Sequences: 27780
Number of extensions: 137975
Number of successful extensions: 425
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 403
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 414
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 514188384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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