Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0007_F20
         (551 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF017647-1|AAC47802.1|  924|Drosophila melanogaster origin recog...    28   9.7  

>AF017647-1|AAC47802.1|  924|Drosophila melanogaster origin
           recognition complex subunit1 protein.
          Length = 924

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 1/89 (1%)
 Frame = -3

Query: 507 PNQRQREDCEVINFKKLNSQEVYQAGNNCYRLNLSSEQSIVM-GTYKNSTGKIVNLLYYG 331
           P+ +  +D   I+F  L   E ++  +N   L     + IV+ GT K S  +I   L   
Sbjct: 103 PHNKYDDDEVAIDFS-LEVIEEHRPYDNDVALGAIYRKCIVLEGTSKTSAEEI---LKRH 158

Query: 330 KGEVKSLYRSCDRIISKYLFIKINENYVL 244
             ++KS   +C   +S+Y F+K+  +Y L
Sbjct: 159 SNKLKST--ACPMFVSRYRFVKVKRSYRL 185


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,327,067
Number of Sequences: 53049
Number of extensions: 487223
Number of successful extensions: 1111
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1080
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1111
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2110522698
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)