Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0007_F19
(504 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical pr... 53 1e-07
U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical p... 47 9e-06
AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synapt... 47 9e-06
U40954-1|ABA00179.1| 251|Caenorhabditis elegans Hypothetical pr... 43 1e-04
U39993-3|AAK72060.1| 728|Caenorhabditis elegans Hypothetical pr... 32 0.21
Z36753-3|CAA85332.1| 297|Caenorhabditis elegans Hypothetical pr... 31 0.36
U39993-2|AAK72059.1| 744|Caenorhabditis elegans Hypothetical pr... 29 1.4
AL034489-7|CAA22469.1| 353|Caenorhabditis elegans Hypothetical ... 29 1.9
Z81453-3|CAB03791.1| 480|Caenorhabditis elegans Hypothetical pr... 29 2.5
AL032660-2|CAA21751.1| 690|Caenorhabditis elegans Hypothetical ... 29 2.5
Z82288-1|CAB05322.2| 479|Caenorhabditis elegans Hypothetical pr... 28 4.4
AF016687-11|ABL01528.1| 646|Caenorhabditis elegans Hypothetical... 27 5.8
Z92811-3|CAB07274.1| 1083|Caenorhabditis elegans Hypothetical pr... 27 7.7
Z92789-9|CAB07223.1| 1083|Caenorhabditis elegans Hypothetical pr... 27 7.7
Z81592-13|CAB76412.2| 421|Caenorhabditis elegans Hypothetical p... 27 7.7
Z78016-9|CAB76723.2| 421|Caenorhabditis elegans Hypothetical pr... 27 7.7
Z36238-7|CAA85278.2| 506|Caenorhabditis elegans Hypothetical pr... 27 7.7
U28991-8|AAM22060.1| 517|Caenorhabditis elegans Hypothetical pr... 27 7.7
U28991-7|AAK68312.1| 626|Caenorhabditis elegans Hypothetical pr... 27 7.7
U28991-6|AAK68313.1| 624|Caenorhabditis elegans Hypothetical pr... 27 7.7
>Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical protein
F29G6.1 protein.
Length = 1170
Score = 52.8 bits (121), Expect = 1e-07
Identities = 28/73 (38%), Positives = 39/73 (53%), Gaps = 6/73 (8%)
Frame = +1
Query: 133 YSPVCGSDGKTYENPCEF---YCEEDKTHSN-MTIVKNTACEVGIPCY--CTLEYAPVCG 294
+SPVC S G T++N C F C ++T + +TI K C C C EY+PVC
Sbjct: 822 FSPVCDSKGSTHQNICHFGVKRCIAERTFGDVLTIDKFEVCNEVKECNNACPKEYSPVCA 881
Query: 295 SYGKTYANQCSLE 333
S G+ N+C L+
Sbjct: 882 SNGQNIVNECELD 894
Score = 45.6 bits (103), Expect = 2e-05
Identities = 23/81 (28%), Positives = 34/81 (41%), Gaps = 3/81 (3%)
Frame = +1
Query: 112 DVFAEKVYSPVCGSDGKTYENPCEFYCEEDKTHSNMTIVKNTACEVGIPCYCTLEYAPVC 291
D V PVCG+D TY N C C + + T C+ C P+C
Sbjct: 18 DCDCPSVIRPVCGTDNVTYNNLCFLRCVQRTNEDLLFFYNGTCCD---KKECEKVGTPIC 74
Query: 292 GSYGKTYANQC---SLECTLK 345
++G+T+ N C +C +K
Sbjct: 75 DNFGETHINDCHFAQFQCIMK 95
Score = 42.3 bits (95), Expect = 2e-04
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +1
Query: 133 YSPVCGSDGKTYENPCEFYCEE-DKTHSNMTIVKNTACEVGIPCYCTLEYAPVCGSYGKT 309
Y P+CG++G T+ N C E + +S + + C C +++PVC S G T
Sbjct: 776 YDPLCGTNGVTFTNACSLQKEICESANSTIEVAYTGMC---CDTNCPSDFSPVCDSKGST 832
Query: 310 YANQC 324
+ N C
Sbjct: 833 HQNIC 837
Score = 42.3 bits (95), Expect = 2e-04
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Frame = +1
Query: 127 KVYSPVCGSDGKTYENPCEFY---CEEDKTHSNMTIVKNTACEVGIPCYCTLEYAPVCGS 297
K PVC S G+T+++ C F+ C DK H+ T + P CT E + +C
Sbjct: 1075 KTGQPVCDSRGRTHDSLCHFHNSKCIFDKIHTQNTTLTLDYQGKCCPAGCTDELSVICDQ 1134
Query: 298 YGKTYANQC 324
+ Y N C
Sbjct: 1135 HENIYRNSC 1143
Score = 41.5 bits (93), Expect = 3e-04
Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 6/75 (8%)
Frame = +1
Query: 127 KVYSPVCGSDGKTYENPCEFYCEEDKTHSNMTIVKNTACEVGIPCYCTLE------YAPV 288
K YSPVC S+G+ N CE +N+T + C C +E ++PV
Sbjct: 874 KEYSPVCASNGQNIVNECELDKIRCLVENNVTTGDKLVKDYDGEC-CRIENCDISVFSPV 932
Query: 289 CGSYGKTYANQCSLE 333
C + G T+AN C ++
Sbjct: 933 CDTEGVTHANMCLMD 947
Score = 40.3 bits (90), Expect = 8e-04
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = +2
Query: 416 CICTREKDPVCGSDGVTYSNLCLLKC 493
C C PVCG+D VTY+NLC L+C
Sbjct: 19 CDCPSVIRPVCGTDNVTYNNLCFLRC 44
Score = 36.7 bits (81), Expect = 0.010
Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 7/82 (8%)
Frame = +1
Query: 100 CHRRDVFAEKVYSPVCGSDGKTYENPC---EFYCEEDKTHS-NMTIVKNTACEVGIPCY- 264
C +++ EKV +P+C + G+T+ N C +F C K+ ++T + C C
Sbjct: 61 CDKKE--CEKVGTPICDNFGETHINDCHFAQFQCIMKKSMGLSLTKLHMGRCS-SKDCNH 117
Query: 265 -CT-LEYAPVCGSYGKTYANQC 324
CT E+ PVC + G Y N C
Sbjct: 118 NCTNTEFDPVCDTNGSVYRNLC 139
Score = 33.5 bits (73), Expect = 0.089
Identities = 22/67 (32%), Positives = 29/67 (43%), Gaps = 5/67 (7%)
Frame = +1
Query: 139 PVCGSDGKTYENPCEF---YC-EEDKTHS-NMTIVKNTACEVGIPCYCTLEYAPVCGSYG 303
PVC S G + N CEF C K H ++ +N + CT + P+C S
Sbjct: 543 PVCDSAGNLHGNLCEFTYSRCIAASKGHQIHIATEENCISKEACQMPCTDDKHPICASDF 602
Query: 304 KTYANQC 324
TY N C
Sbjct: 603 STYENLC 609
Score = 33.5 bits (73), Expect = 0.089
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +2
Query: 422 CTREKDPVCGSDGVTYSNLC 481
CT +K P+C SD TY NLC
Sbjct: 590 CTDDKHPICASDFSTYENLC 609
Score = 33.5 bits (73), Expect = 0.089
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +2
Query: 422 CTREKDPVCGSDGVTYSNLCLLK 490
C DP+CG++GVT++N C L+
Sbjct: 772 CDNSYDPLCGTNGVTFTNACSLQ 794
Score = 31.9 bits (69), Expect = 0.27
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 8/76 (10%)
Frame = +1
Query: 124 EKVYSPVCGSDGKTYENPCE---FYCEEDKTH-SNMTIVKNTACEVG----IPCYCTLEY 279
+K + PVC + +T++N C+ F C+ +K S + I + AC I C +
Sbjct: 258 DKSWDPVCDTRNRTHKNVCQFKFFACKINKIDGSVIDIAHSGACRARKSTCITCPKDEKK 317
Query: 280 APVCGSYGKTYANQCS 327
P+C + T+ CS
Sbjct: 318 IPICDNRNMTHPTLCS 333
Score = 31.5 bits (68), Expect = 0.36
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +1
Query: 265 CTLEYAPVCGSYGKTYANQCSLE 333
C Y P+CG+ G T+ N CSL+
Sbjct: 772 CDNSYDPLCGTNGVTFTNACSLQ 794
Score = 31.1 bits (67), Expect = 0.47
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = +2
Query: 371 HDGECQGAKLASLHPCICTREKDPVCGSDGVTYSNLCLLK 490
H G C H C T E DPVC ++G Y NLC+ +
Sbjct: 106 HMGRCSSKDCN--HNCTNT-EFDPVCDTNGSVYRNLCVFQ 142
Score = 31.1 bits (67), Expect = 0.47
Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = +1
Query: 139 PVCGSDGKTYENPCEFYCEEDKTHSNMTIVKNTACE-VGIPCYCTLEYAP 285
P+C SD TYEN C+F ++ + K E + PC E +P
Sbjct: 596 PICASDFSTYENLCQFRKQKCLDSELEVLFKGKCSECLDSPCALPAENSP 645
Score = 29.9 bits (64), Expect = 1.1
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = +2
Query: 359 LKMEHDGECQGAKLASLHPCICTREKDPVCGSDGVTYSNLCLL 487
L ++DGEC + C + PVC ++GVT++N+CL+
Sbjct: 910 LVKDYDGEC-----CRIENCDIS-VFSPVCDTEGVTHANMCLM 946
Score = 29.9 bits (64), Expect = 1.1
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Frame = +1
Query: 142 VCGSDGKTYENPCEFY---C-EEDKTHSNMTIVKNTACEVGIPCYCTLEYAPVCGSYGKT 309
VC S+G+T+ N C + C + + + IV C C T + PVC S G+T
Sbjct: 1030 VCDSEGQTHMNHCVYQQRRCMAQTISQKTLNIVHTGECCALASCPKTGQ--PVCDSRGRT 1087
Query: 310 YANQC 324
+ + C
Sbjct: 1088 HDSLC 1092
Score = 29.1 bits (62), Expect = 1.9
Identities = 17/43 (39%), Positives = 22/43 (51%)
Frame = +2
Query: 353 RLLKMEHDGECQGAKLASLHPCICTREKDPVCGSDGVTYSNLC 481
+ L + H GEC LAS C + PVC S G T+ +LC
Sbjct: 1057 KTLNIVHTGEC--CALAS-----CPKTGQPVCDSRGRTHDSLC 1092
Score = 27.9 bits (59), Expect = 4.4
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = +2
Query: 359 LKMEHDGECQGAKLASLHPCICTREKDPVCGSDGVTYSNLC 481
+K H+ Q + P C+R+ PVC T+ NLC
Sbjct: 354 IKSCHERSPQFTLKDEICPRTCSRDVKPVCDEANNTHQNLC 394
Score = 27.5 bits (58), Expect = 5.8
Identities = 11/42 (26%), Positives = 21/42 (50%)
Frame = +2
Query: 356 LLKMEHDGECQGAKLASLHPCICTREKDPVCGSDGVTYSNLC 481
++ + H G C+ K + C +K P+C + +T+ LC
Sbjct: 292 VIDIAHSGACRARKSTCI-TCPKDEKKIPICDNRNMTHPTLC 332
>U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical
protein F41G3.12 protein.
Length = 1483
Score = 46.8 bits (106), Expect = 9e-06
Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 23/93 (24%)
Frame = +1
Query: 124 EKVYSPVCGSDGKTYENPCEFYCEEDKTHSNMTIVKNTACEVGI---------------- 255
E V PVC ++G+T++N CE + +T S + + C +G+
Sbjct: 398 EDVMRPVCATNGETFDNECEMKKKSCETKSMIKVKHQGTCGIGVCATFDSCKKPQVCVVV 457
Query: 256 ----PCYC---TLEYAPVCGSYGKTYANQCSLE 333
C C T E+ VCGS GKTY+N+C L+
Sbjct: 458 DGKPKCVCPSCTDEFKEVCGSDGKTYSNECRLQ 490
Score = 39.1 bits (87), Expect = 0.002
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = +1
Query: 133 YSPVCGSDGKTYENPCEFYCEEDKTHSNMTIVKNTACE 246
+ VCGSDGKTY N C N+ + N+ACE
Sbjct: 472 FKEVCGSDGKTYSNECRLQNAACMAQKNIFVKYNSACE 509
Score = 38.3 bits (85), Expect = 0.003
Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 22/88 (25%)
Frame = +1
Query: 136 SPVCGSDGKTYENPCEFYCEEDKTHSNMTIV--------------KNTACEVGIP----- 258
SPVC S G Y++ C ++ +N+T+ C++G+
Sbjct: 258 SPVCSSHGVDYQSSCHLRHHACESKTNITVKFFGRCDPCHGHKCPNGQTCQLGVDRRPEC 317
Query: 259 -C--YCTLEYAPVCGSYGKTYANQCSLE 333
C CT+ A VCG+ GKTY N+C L+
Sbjct: 318 KCSEQCTMNSAHVCGTDGKTYLNECFLK 345
Score = 35.5 bits (78), Expect = 0.022
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +1
Query: 142 VCGSDGKTYENPCEFYCEEDKTHSNMTIVKNTAC-EVGIPC 261
VCG+DGKTY N C K ++ + K C E G PC
Sbjct: 330 VCGTDGKTYLNECFLKLAACKEQKDILVWKRGNCDEAGSPC 370
Score = 35.5 bits (78), Expect = 0.022
Identities = 16/26 (61%), Positives = 18/26 (69%)
Frame = +2
Query: 422 CTREKDPVCGSDGVTYSNLCLLKCAS 499
CT E VCGSDG TYSN C L+ A+
Sbjct: 468 CTDEFKEVCGSDGKTYSNECRLQNAA 493
Score = 34.7 bits (76), Expect = 0.039
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = +2
Query: 443 VCGSDGVTYSNLCLLK 490
VCGSDG TYSNLC LK
Sbjct: 880 VCGSDGTTYSNLCELK 895
Score = 33.9 bits (74), Expect = 0.067
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = +2
Query: 422 CTREKDPVCGSDGVTYSNLCLLKCAS 499
CT VCG+DG TY N C LK A+
Sbjct: 323 CTMNSAHVCGTDGKTYLNECFLKLAA 348
Score = 31.5 bits (68), Expect = 0.36
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +2
Query: 440 PVCGSDGVTYSNLCLLKCAS 499
P+CGSDG+ Y+N C L S
Sbjct: 693 PICGSDGIVYNNQCHLNTIS 712
Score = 29.9 bits (64), Expect = 1.1
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +2
Query: 431 EKDPVCGSDGVTYSNLCLLK 490
E VCG+DGVTYS+ C +K
Sbjct: 547 EGKEVCGTDGVTYSSECHMK 566
Score = 29.5 bits (63), Expect = 1.4
Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 10/58 (17%)
Frame = +1
Query: 187 YCEEDKTH-SNMTIVKNTACEVGIPCY---CTLEYA------PVCGSYGKTYANQCSL 330
+C KT + + + AC G C+ CT P+CGS G Y NQC L
Sbjct: 651 HCHSSKTSFPDFKVRRPCACYFGATCHNWACTCPTCNLSSNYPICGSDGIVYNNQCHL 708
Score = 29.5 bits (63), Expect = 1.4
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +1
Query: 142 VCGSDGKTYENPCE 183
VCGSDG TY N CE
Sbjct: 880 VCGSDGTTYSNLCE 893
Score = 29.1 bits (62), Expect = 1.9
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +2
Query: 422 CTREKDPVCGSDGVTYSNLCLLKCAS 499
C D VCGSD V+YS+ C L S
Sbjct: 169 CRVVTDVVCGSDHVSYSSFCHLSVRS 194
Score = 28.7 bits (61), Expect = 2.5
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 6/59 (10%)
Frame = +1
Query: 172 NPCE-FYCE--ED--KTHSNMTIVKNTACEVGIPCYC-TLEYAPVCGSYGKTYANQCSL 330
NPCE C ED N ++ C P Y ++E +PVC S+G Y + C L
Sbjct: 216 NPCEDLRCGPGEDCVVNQINGILLAKCVCPTQCPNYGDSVESSPVCSSHGVDYQSSCHL 274
Score = 27.9 bits (59), Expect = 4.4
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +1
Query: 139 PVCGSDGKTYENPC 180
P+CGSDG Y N C
Sbjct: 693 PICGSDGIVYNNQC 706
Score = 27.9 bits (59), Expect = 4.4
Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 3/24 (12%)
Frame = +1
Query: 286 VCGSYGKTYANQCSLE---CTLKI 348
VCGS G TY+N C L+ C +K+
Sbjct: 880 VCGSDGTTYSNLCELKMFACNIKL 903
Score = 27.1 bits (57), Expect = 7.7
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +2
Query: 443 VCGSDGVTYSNLCLLKCAS 499
+CG +GV Y +LC L+ AS
Sbjct: 619 ICGENGVLYPSLCHLQLAS 637
>AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synaptic
protein) homologfamily member protein.
Length = 1473
Score = 46.8 bits (106), Expect = 9e-06
Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 23/93 (24%)
Frame = +1
Query: 124 EKVYSPVCGSDGKTYENPCEFYCEEDKTHSNMTIVKNTACEVGI---------------- 255
E V PVC ++G+T++N CE + +T S + + C +G+
Sbjct: 406 EDVMRPVCATNGETFDNECEMKKKSCETKSMIKVKHQGTCGIGVCATFDSCKKPQVCVVV 465
Query: 256 ----PCYC---TLEYAPVCGSYGKTYANQCSLE 333
C C T E+ VCGS GKTY+N+C L+
Sbjct: 466 DGKPKCVCPSCTDEFKEVCGSDGKTYSNECRLQ 498
Score = 39.1 bits (87), Expect = 0.002
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = +1
Query: 133 YSPVCGSDGKTYENPCEFYCEEDKTHSNMTIVKNTACE 246
+ VCGSDGKTY N C N+ + N+ACE
Sbjct: 480 FKEVCGSDGKTYSNECRLQNAACMAQKNIFVKYNSACE 517
Score = 38.3 bits (85), Expect = 0.003
Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 22/88 (25%)
Frame = +1
Query: 136 SPVCGSDGKTYENPCEFYCEEDKTHSNMTIV--------------KNTACEVGIP----- 258
SPVC S G Y++ C ++ +N+T+ C++G+
Sbjct: 266 SPVCSSHGVDYQSSCHLRHHACESKTNITVKFFGRCDPCHGHKCPNGQTCQLGVDRRPEC 325
Query: 259 -C--YCTLEYAPVCGSYGKTYANQCSLE 333
C CT+ A VCG+ GKTY N+C L+
Sbjct: 326 KCSEQCTMNSAHVCGTDGKTYLNECFLK 353
Score = 35.5 bits (78), Expect = 0.022
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +1
Query: 142 VCGSDGKTYENPCEFYCEEDKTHSNMTIVKNTAC-EVGIPC 261
VCG+DGKTY N C K ++ + K C E G PC
Sbjct: 338 VCGTDGKTYLNECFLKLAACKEQKDILVWKRGNCDEAGSPC 378
Score = 35.5 bits (78), Expect = 0.022
Identities = 16/26 (61%), Positives = 18/26 (69%)
Frame = +2
Query: 422 CTREKDPVCGSDGVTYSNLCLLKCAS 499
CT E VCGSDG TYSN C L+ A+
Sbjct: 476 CTDEFKEVCGSDGKTYSNECRLQNAA 501
Score = 34.7 bits (76), Expect = 0.039
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = +2
Query: 443 VCGSDGVTYSNLCLLK 490
VCGSDG TYSNLC LK
Sbjct: 819 VCGSDGTTYSNLCELK 834
Score = 33.9 bits (74), Expect = 0.067
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = +2
Query: 422 CTREKDPVCGSDGVTYSNLCLLKCAS 499
CT VCG+DG TY N C LK A+
Sbjct: 331 CTMNSAHVCGTDGKTYLNECFLKLAA 356
Score = 29.9 bits (64), Expect = 1.1
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +2
Query: 431 EKDPVCGSDGVTYSNLCLLK 490
E VCG+DGVTYS+ C +K
Sbjct: 555 EGKEVCGTDGVTYSSECHMK 574
Score = 29.5 bits (63), Expect = 1.4
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +1
Query: 142 VCGSDGKTYENPCE 183
VCGSDG TY N CE
Sbjct: 819 VCGSDGTTYSNLCE 832
Score = 29.1 bits (62), Expect = 1.9
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +2
Query: 422 CTREKDPVCGSDGVTYSNLCLLKCAS 499
C D VCGSD V+YS+ C L S
Sbjct: 177 CRVVTDVVCGSDHVSYSSFCHLSVRS 202
Score = 28.7 bits (61), Expect = 2.5
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 6/59 (10%)
Frame = +1
Query: 172 NPCE-FYCE--ED--KTHSNMTIVKNTACEVGIPCYC-TLEYAPVCGSYGKTYANQCSL 330
NPCE C ED N ++ C P Y ++E +PVC S+G Y + C L
Sbjct: 224 NPCEDLRCGPGEDCVVNQINGILLAKCVCPTQCPNYGDSVESSPVCSSHGVDYQSSCHL 282
Score = 27.1 bits (57), Expect = 7.7
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +2
Query: 443 VCGSDGVTYSNLCLLKCAS 499
+CG +GV Y +LC L+ AS
Sbjct: 627 ICGENGVLYPSLCHLQLAS 645
>U40954-1|ABA00179.1| 251|Caenorhabditis elegans Hypothetical
protein ZK813.6 protein.
Length = 251
Score = 42.7 bits (96), Expect = 1e-04
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Frame = +1
Query: 139 PVCGSDGKTYENPCEF---YCEEDKTHSNMTIVKNTACEVGIPCYCTLEYAPVCGSYGKT 309
PVC S+G+ Y+ CEF C E K N + ++ + C E+ PVC G+T
Sbjct: 81 PVC-SEGQMYQTVCEFEERQCIEFKLFKNHISMDSSQEKCSCTAPCPTEWNPVCDKKGQT 139
Query: 310 YANQCS 327
+AN C+
Sbjct: 140 HANFCT 145
Score = 38.7 bits (86), Expect = 0.002
Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 3/68 (4%)
Frame = +1
Query: 139 PVCGSDGK---TYENPCEFYCEEDKTHSNMTIVKNTACEVGIPCYCTLEYAPVCGSYGKT 309
PVC +G TY N C F C ++ + + + + C YC + PVC S G+
Sbjct: 33 PVCVREGPYQYTYSNKCVFQCAQENKKDLVLLYEGSCCSAR---YCNMFEQPVC-SEGQM 88
Query: 310 YANQCSLE 333
Y C E
Sbjct: 89 YQTVCEFE 96
Score = 33.5 bits (73), Expect = 0.089
Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 3/30 (10%)
Frame = +2
Query: 416 CICTREKDPVCGSDG---VTYSNLCLLKCA 496
C C E DPVC +G TYSN C+ +CA
Sbjct: 25 CSCKPEIDPVCVREGPYQYTYSNKCVFQCA 54
Score = 30.3 bits (65), Expect = 0.83
Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 3/29 (10%)
Frame = +1
Query: 259 CYCTLEYAPVC---GSYGKTYANQCSLEC 336
C C E PVC G Y TY+N+C +C
Sbjct: 25 CSCKPEIDPVCVREGPYQYTYSNKCVFQC 53
Score = 29.1 bits (62), Expect = 1.9
Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 4/69 (5%)
Frame = +1
Query: 133 YSPVCGSDGKTYENPCEFY---C-EEDKTHSNMTIVKNTACEVGIPCYCTLEYAPVCGSY 300
++PVC G+T+ N C F C +++ + ++ + + C + C VC S
Sbjct: 129 WNPVCDKKGQTHANFCTFLNSKCYHKNQLNESLEVDYSGVCCEDM-CSAGQTSLTVCDSE 187
Query: 301 GKTYANQCS 327
G T+ + CS
Sbjct: 188 GNTHTDICS 196
>U39993-3|AAK72060.1| 728|Caenorhabditis elegans Hypothetical
protein F47E1.4 protein.
Length = 728
Score = 32.3 bits (70), Expect = 0.21
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +1
Query: 139 PVCGSDGKTYENPCEFYCEEDKTHSNMTIVKNTACE 246
PVC +DG Y +PC C E + ++ +CE
Sbjct: 537 PVCSADGTAYFSPCHAGCREATQFGSDPVIGFASCE 572
>Z36753-3|CAA85332.1| 297|Caenorhabditis elegans Hypothetical
protein T09A5.4 protein.
Length = 297
Score = 31.5 bits (68), Expect = 0.36
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = -1
Query: 150 PADGTIDFFRKYITPVAELLPSILAQRRSEEYRVYS 43
PADG +DF + I + ++ SIL + R EY VY+
Sbjct: 164 PADGQLDFLERLIV-LYYIMDSILIEERWNEYMVYT 198
>U39993-2|AAK72059.1| 744|Caenorhabditis elegans Hypothetical
protein F47E1.2 protein.
Length = 744
Score = 29.5 bits (63), Expect = 1.4
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = +1
Query: 139 PVCGSDGKTYENPCEFYCEEDKTHSNMTIVKNTACE 246
PVC G Y +PC C E + + ++ T+C+
Sbjct: 545 PVCDQTGFAYFSPCHAGCREAMQYGSDPVLDFTSCQ 580
>AL034489-7|CAA22469.1| 353|Caenorhabditis elegans Hypothetical
protein Y7A5A.9 protein.
Length = 353
Score = 29.1 bits (62), Expect = 1.9
Identities = 27/68 (39%), Positives = 32/68 (47%), Gaps = 5/68 (7%)
Frame = +3
Query: 270 LGICP-RLWLL-RKNLRQPM-FTGMHPKD--YTGS*RWNMMANARELNWRVYIRVYARAR 434
LG C R+ L RKN+ Q + F K+ Y G RWNM A+ L W R A
Sbjct: 91 LGACEHRMHFLGRKNIHQDISFFKKSRKELSYLGP-RWNMENQAQNLCWAQEKRQNVLAL 149
Query: 435 KIQFAGAT 458
IQFA T
Sbjct: 150 TIQFAANT 157
>Z81453-3|CAB03791.1| 480|Caenorhabditis elegans Hypothetical
protein B0250.4 protein.
Length = 480
Score = 28.7 bits (61), Expect = 2.5
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = -3
Query: 280 HIPRYSSRGCPPRMRCFSRLSYCCVSCPLRSKIHTGSRTSYH 155
HI Y C P + SR +Y C CP+R T S ++H
Sbjct: 248 HIMMYHLYICHPEQKMESRPTYFCDRCPMR--FGTESALNFH 287
>AL032660-2|CAA21751.1| 690|Caenorhabditis elegans Hypothetical
protein Y70G10A.3 protein.
Length = 690
Score = 28.7 bits (61), Expect = 2.5
Identities = 11/28 (39%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Frame = +1
Query: 259 CYCTLEYAPVCG-SYGKTYANQCSLECT 339
C+C +E+ PVC + G Y + C CT
Sbjct: 457 CHCKMEWNPVCDRNTGHMYYSACHAGCT 484
>Z82288-1|CAB05322.2| 479|Caenorhabditis elegans Hypothetical
protein ZK896.1 protein.
Length = 479
Score = 27.9 bits (59), Expect = 4.4
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = -2
Query: 287 TGAYSKVQ*QGMPTSHAVFFTIVILLCV 204
TGA+ + Q TS+ + FTIV+ +C+
Sbjct: 448 TGAFVSFEFQKSATSNGILFTIVLTICM 475
>AF016687-11|ABL01528.1| 646|Caenorhabditis elegans Hypothetical
protein T21D12.7 protein.
Length = 646
Score = 27.5 bits (58), Expect = 5.8
Identities = 16/60 (26%), Positives = 23/60 (38%), Gaps = 4/60 (6%)
Frame = -3
Query: 331 PVNIGWRKFFRKSHRRGHIPRYSSRGCPPRMRCFSR----LSYCCVSCPLRSKIHTGSRT 164
PVN W + R+G R C F+ YC +CP ++H+ RT
Sbjct: 243 PVNTWWFDY-----RKGECKRAEHSNCEEHFNSFANQEQCADYCVGTCPNNLEVHSNPRT 297
>Z92811-3|CAB07274.1| 1083|Caenorhabditis elegans Hypothetical
protein T01G1.3 protein.
Length = 1083
Score = 27.1 bits (57), Expect = 7.7
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +2
Query: 230 KTPHARWASPATVPWNMPPSVALTEKLTPTNVHWNAP 340
+TP P T+P NMPPS + + P WN P
Sbjct: 848 QTPSWDHKPPPTMPANMPPS----KPVAPVTPGWNDP 880
>Z92789-9|CAB07223.1| 1083|Caenorhabditis elegans Hypothetical
protein T01G1.3 protein.
Length = 1083
Score = 27.1 bits (57), Expect = 7.7
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +2
Query: 230 KTPHARWASPATVPWNMPPSVALTEKLTPTNVHWNAP 340
+TP P T+P NMPPS + + P WN P
Sbjct: 848 QTPSWDHKPPPTMPANMPPS----KPVAPVTPGWNDP 880
>Z81592-13|CAB76412.2| 421|Caenorhabditis elegans Hypothetical
protein R186.6 protein.
Length = 421
Score = 27.1 bits (57), Expect = 7.7
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +1
Query: 124 EKVYSPVCGSDGKTYENPCEFYCE 195
E VY+ V DGK YE+P FY E
Sbjct: 19 EDVYNTVEEVDGKEYEDPDYFYDE 42
>Z78016-9|CAB76723.2| 421|Caenorhabditis elegans Hypothetical
protein R186.6 protein.
Length = 421
Score = 27.1 bits (57), Expect = 7.7
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +1
Query: 124 EKVYSPVCGSDGKTYENPCEFYCE 195
E VY+ V DGK YE+P FY E
Sbjct: 19 EDVYNTVEEVDGKEYEDPDYFYDE 42
>Z36238-7|CAA85278.2| 506|Caenorhabditis elegans Hypothetical
protein R74.8a protein.
Length = 506
Score = 27.1 bits (57), Expect = 7.7
Identities = 11/22 (50%), Positives = 15/22 (68%), Gaps = 2/22 (9%)
Frame = -2
Query: 374 HVPSSGAGIIFRVHSSE--HWL 315
H+ SSG GII VH+ + HW+
Sbjct: 455 HISSSGEGIILDVHAQQKLHWV 476
>U28991-8|AAM22060.1| 517|Caenorhabditis elegans Hypothetical
protein F08F8.9c protein.
Length = 517
Score = 27.1 bits (57), Expect = 7.7
Identities = 13/55 (23%), Positives = 22/55 (40%)
Frame = +1
Query: 118 FAEKVYSPVCGSDGKTYENPCEFYCEEDKTHSNMTIVKNTACEVGIPCYCTLEYA 282
F V+ P+ S Y++P + S+ + V + P Y T EY+
Sbjct: 312 FGVAVHEPISESSASAYDDPTRNHWNPQSATSDYSTVPTSGTSNVFPSYQTSEYS 366
>U28991-7|AAK68312.1| 626|Caenorhabditis elegans Hypothetical
protein F08F8.9a protein.
Length = 626
Score = 27.1 bits (57), Expect = 7.7
Identities = 13/55 (23%), Positives = 22/55 (40%)
Frame = +1
Query: 118 FAEKVYSPVCGSDGKTYENPCEFYCEEDKTHSNMTIVKNTACEVGIPCYCTLEYA 282
F V+ P+ S Y++P + S+ + V + P Y T EY+
Sbjct: 312 FGVAVHEPISESSASAYDDPTRNHWNPQSATSDYSTVPTSGTSNVFPSYQTSEYS 366
>U28991-6|AAK68313.1| 624|Caenorhabditis elegans Hypothetical
protein F08F8.9b protein.
Length = 624
Score = 27.1 bits (57), Expect = 7.7
Identities = 13/55 (23%), Positives = 22/55 (40%)
Frame = +1
Query: 118 FAEKVYSPVCGSDGKTYENPCEFYCEEDKTHSNMTIVKNTACEVGIPCYCTLEYA 282
F V+ P+ S Y++P + S+ + V + P Y T EY+
Sbjct: 312 FGVAVHEPISESSASAYDDPTRNHWNPQSATSDYSTVPTSGTSNVFPSYQTSEYS 366
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,550,739
Number of Sequences: 27780
Number of extensions: 292443
Number of successful extensions: 849
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 729
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 834
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 967231538
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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