Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0007_F19
         (504 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              32   0.004
EF051030-1|ABN05618.1|  118|Apis mellifera phosphoenolpyruvate c...    24   0.78 
S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor prot...    23   1.8  
S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor prot...    23   1.8  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   1.8  
U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive o...    22   3.2  
AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin ...    22   3.2  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    22   4.2  
AY375535-1|AAQ82648.1|  147|Apis mellifera doublesex protein.          21   9.6  
AF134816-1|AAD40232.1|   50|Apis mellifera unknown protein.            21   9.6  

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 31.9 bits (69), Expect = 0.004
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = +1

Query: 265 CTLEYAPVCGSYGKTYANQCSL 330
           C   + PVC S GK YAN C L
Sbjct: 110 CPRRHRPVCASNGKIYANHCEL 131



 Score = 30.3 bits (65), Expect = 0.012
 Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 4/44 (9%)
 Frame = +2

Query: 380 ECQGAKLASLHPCICTRE----KDPVCGSDGVTYSNLCLLKCAS 499
           EC+ +  +++  C+C R+      PVC S+G  Y+N C L  A+
Sbjct: 92  ECELSPNSTIAVCVCMRKCPRRHRPVCASNGKIYANHCELHRAA 135



 Score = 30.3 bits (65), Expect = 0.012
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +1

Query: 133 YSPVCGSDGKTYENPCEFYCEEDKTHSNMTIVKN 234
           + PVC S+GK Y N CE +      HS  ++ K+
Sbjct: 114 HRPVCASNGKIYANHCELH--RAACHSGSSLTKS 145


>EF051030-1|ABN05618.1|  118|Apis mellifera phosphoenolpyruvate
           carboxykinase protein.
          Length = 118

 Score = 24.2 bits (50), Expect = 0.78
 Identities = 10/31 (32%), Positives = 14/31 (45%)
 Frame = -3

Query: 337 CIPVNIGWRKFFRKSHRRGHIPRYSSRGCPP 245
           C+  +I W KF ++   R   P Y   G  P
Sbjct: 41  CVGDDIAWMKFDKEGRLRAINPEYGFFGVAP 71


>S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor
           protein.
          Length = 169

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +2

Query: 347 LYRLLKMEHDGECQGAKLASLHP 415
           L  +L+M  DG C+     S HP
Sbjct: 102 LMAILRMSADGGCRNFSTCSSHP 124


>S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor
           protein.
          Length = 168

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +2

Query: 347 LYRLLKMEHDGECQGAKLASLHP 415
           L  +L+M  DG C+     S HP
Sbjct: 101 LMAILRMSADGGCRNFSTCSSHP 123


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 8/21 (38%), Positives = 16/21 (76%)
 Frame = -3

Query: 184 IHTGSRTSYHLTRRRDYRLFP 122
           +++G+R+S  LT +  +RL+P
Sbjct: 53  LYSGTRSSESLTAQAHHRLYP 73


>U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive
           opsin protein.
          Length = 377

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 7/17 (41%), Positives = 14/17 (82%)
 Frame = -1

Query: 123 RKYITPVAELLPSILAQ 73
           R+ +TPV+ +LP++ A+
Sbjct: 310 RELLTPVSTMLPAVFAK 326


>AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin
           protein.
          Length = 377

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 7/17 (41%), Positives = 14/17 (82%)
 Frame = -1

Query: 123 RKYITPVAELLPSILAQ 73
           R+ +TPV+ +LP++ A+
Sbjct: 310 RELLTPVSTMLPAVFAK 326


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -1

Query: 438 SFSRVHIHGCKL 403
           S   +H+HGCK+
Sbjct: 93  SLHELHVHGCKV 104


>AY375535-1|AAQ82648.1|  147|Apis mellifera doublesex protein.
          Length = 147

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 6/7 (85%), Positives = 6/7 (85%)
 Frame = +1

Query: 256 PCYCTLE 276
           PCYCT E
Sbjct: 1   PCYCTCE 7


>AF134816-1|AAD40232.1|   50|Apis mellifera unknown protein.
          Length = 50

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +3

Query: 339 PKDYTGS*RWNM 374
           PKD+ GS  W+M
Sbjct: 31  PKDHNGSIYWSM 42


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,235
Number of Sequences: 438
Number of extensions: 3793
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13864083
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)