Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0007_F15
(617 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0293 + 22849103-22849513,22849670-22849756,22850156-228502... 52 4e-07
01_06_0824 - 32243495-32244319,32244449-32244859 52 5e-07
01_01_1152 + 9170628-9171899 50 2e-06
11_02_0011 - 7337618-7338496,7338596-7338991 48 5e-06
11_02_0012 - 7346282-7347136,7347234-7347593 47 1e-05
04_04_0619 + 26652923-26653267,26653440-26654273 47 1e-05
03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869 47 1e-05
11_02_0014 - 7352619-7352918,7353173-7353418 44 1e-04
11_01_0767 + 6438648-6438809,6439146-6440000 40 0.001
11_01_0771 + 6453130-6454488 38 0.006
11_01_0750 - 6315126-6315896,6316371-6316784 38 0.008
04_04_0190 - 23442824-23442846,23442891-23442949,23443613-234437... 35 0.059
05_06_0044 - 25150322-25151260 34 0.078
04_04_1068 + 30552935-30553234,30553424-30553623,30553738-30554122 33 0.18
04_01_0216 - 2739742-2740381,2742346-2742883,2745014-2745911 28 6.8
03_01_0536 - 4020235-4021161,4022760-4022808,4023203-4023267 27 9.0
>03_05_0293 +
22849103-22849513,22849670-22849756,22850156-22850284,
22850507-22851262,22853474-22854250
Length = 719
Score = 52.0 bits (119), Expect = 4e-07
Identities = 25/62 (40%), Positives = 31/62 (50%)
Frame = +3
Query: 432 AASAAAINKWVESKTNDRIKXXXXXXXXXXXXRVVLVNALYFKGMWKSQFSPMNTMDQPF 611
A A+ +N WVE T+ IK R+VL NALYFKG W +F T D F
Sbjct: 211 AEVASQVNSWVEKVTSGLIKEILPPGSVDHTTRLVLGNALYFKGAWTEKFDASKTKDGEF 270
Query: 612 HI 617
H+
Sbjct: 271 HL 272
Score = 48.4 bits (110), Expect = 5e-06
Identities = 21/56 (37%), Positives = 28/56 (50%)
Frame = +3
Query: 450 INKWVESKTNDRIKXXXXXXXXXXXXRVVLVNALYFKGMWKSQFSPMNTMDQPFHI 617
+N WV+ T+ IK ++VL NALYFKG W +F T D FH+
Sbjct: 469 VNSWVDRVTSGLIKNIATPRSINHNTKLVLANALYFKGAWAEKFDVSKTEDGEFHL 524
>01_06_0824 - 32243495-32244319,32244449-32244859
Length = 411
Score = 51.6 bits (118), Expect = 5e-07
Identities = 33/106 (31%), Positives = 47/106 (44%), Gaps = 1/106 (0%)
Frame = +3
Query: 303 GITLNIANKVYLKEGPYELHSELKEDAVKVFDASFEKLNFNDGAASAAA-INKWVESKTN 479
G + AN V++ + L + + A ++F D A IN+W ES T
Sbjct: 96 GPKVRFANGVWV-DAALRLKAAYARVVADKYRAEARPVSFRDKLEEARREINEWFESATA 154
Query: 480 DRIKXXXXXXXXXXXXRVVLVNALYFKGMWKSQFSPMNTMDQPFHI 617
RIK VL NALYFKG W+S+F +T D F++
Sbjct: 155 GRIKDFLPKDAVDRATPAVLGNALYFKGDWESKFDARSTSDDVFYL 200
>01_01_1152 + 9170628-9171899
Length = 423
Score = 49.6 bits (113), Expect = 2e-06
Identities = 43/165 (26%), Positives = 64/165 (38%), Gaps = 2/165 (1%)
Frame = +3
Query: 129 KSQNVVSSPLSAEYXXXXXXXXXXDPAHEELLTSLDIPN-DDCIRSSFTSITSNLKSIQG 305
+ +N + SPLS ELL L P+ + RS T + + L+ +
Sbjct: 57 QGRNFIVSPLSFHAALALVADGARGETQRELLGFLGSPSLAELHRSPTTRLVARLRHLPN 116
Query: 306 ITLNIANKVYLKEGPYELHSELKEDAVKVFDASFEKLNFNDGAASAAA-INKWVESKTND 482
+ A V++ G L E + A + A E +F A +N +V T
Sbjct: 117 TSF--ACGVWVDRGR-ALTPEFADAAASRYAAVAEPADFATQPEQARERVNAFVSDATEG 173
Query: 483 RIKXXXXXXXXXXXXRVVLVNALYFKGMWKSQFSPMNTMDQPFHI 617
I+ VVL NA++FKG W F P T PFH+
Sbjct: 174 LIRDVLPPNSVDSSTVVVLANAVHFKGTWSLPFHPSATFHAPFHL 218
>11_02_0011 - 7337618-7338496,7338596-7338991
Length = 424
Score = 48.4 bits (110), Expect = 5e-06
Identities = 46/169 (27%), Positives = 64/169 (37%), Gaps = 5/169 (2%)
Frame = +3
Query: 123 LDKSQNVVSSPLSAEYXXXXXXXXXXDPAHEELLTSLDIPN-DDCIRSSFTSITSNL--- 290
+ ++N+V SP S +ELL L + DD S ++ L
Sbjct: 27 VSSNKNLVFSPASLYAALALVAAGARGTTLDELLALLGAASLDDLEESVRRAVEVGLADE 86
Query: 291 KSIQGITLNIANKVYLKEGPYELHSELKEDAVKVFDASFEKLNFN-DGAASAAAINKWVE 467
+ G ++ A V+ E EL + A + A NF S INKWV
Sbjct: 87 SASGGPRVSDACGVWHDE-TLELKPAYRAAAAGTYKAVTRAANFQRQPKRSRKKINKWVS 145
Query: 468 SKTNDRIKXXXXXXXXXXXXRVVLVNALYFKGMWKSQFSPMNTMDQPFH 614
TN I +VLVNA+YFKG W + F +T FH
Sbjct: 146 KATNKLIPEILPDGSVHVDTALVLVNAIYFKGKWSNPFPRSSTTTGKFH 194
>11_02_0012 - 7346282-7347136,7347234-7347593
Length = 404
Score = 47.2 bits (107), Expect = 1e-05
Identities = 23/60 (38%), Positives = 28/60 (46%)
Frame = +3
Query: 435 ASAAAINKWVESKTNDRIKXXXXXXXXXXXXRVVLVNALYFKGMWKSQFSPMNTMDQPFH 614
+S INKWV TN I+ +VLVNA+YFKG W + F T FH
Sbjct: 123 SSRKKINKWVSKATNKLIREILPDGSVHGGTALVLVNAIYFKGKWSNPFPRERTTTGKFH 182
>04_04_0619 + 26652923-26653267,26653440-26654273
Length = 392
Score = 47.2 bits (107), Expect = 1e-05
Identities = 24/87 (27%), Positives = 39/87 (44%), Gaps = 1/87 (1%)
Frame = +3
Query: 357 LHSELKEDAVKVFDASFEKLNF-NDGAASAAAINKWVESKTNDRIKXXXXXXXXXXXXRV 533
L E + A A ++F N A+AA +N+++ TN R+ +
Sbjct: 91 LRPEFQSTAAAAHGAFPRSVDFQNQANAAAAEVNRFISQATNGRLNNTISPGTFGSSTKC 150
Query: 534 VLVNALYFKGMWKSQFSPMNTMDQPFH 614
VL NA++FK W +F +T + FH
Sbjct: 151 VLANAMHFKATWGRKFESYDTQRRRFH 177
>03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869
Length = 258
Score = 47.2 bits (107), Expect = 1e-05
Identities = 23/62 (37%), Positives = 30/62 (48%)
Frame = +3
Query: 432 AASAAAINKWVESKTNDRIKXXXXXXXXXXXXRVVLVNALYFKGMWKSQFSPMNTMDQPF 611
A A+ +N WV+ T+ IK R+VL NALYFKG W +F T D F
Sbjct: 3 AEVASQVNSWVDRVTSGLIKEILPPGSVDHTTRLVLGNALYFKGAWTEKFDASKTKDGEF 62
Query: 612 HI 617
+
Sbjct: 63 RL 64
>11_02_0014 - 7352619-7352918,7353173-7353418
Length = 181
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/59 (37%), Positives = 26/59 (44%)
Frame = +3
Query: 438 SAAAINKWVESKTNDRIKXXXXXXXXXXXXRVVLVNALYFKGMWKSQFSPMNTMDQPFH 614
S IN+WV TN I +VLVNA+YFKG W F +T FH
Sbjct: 86 SRKKINEWVSKATNKLIPEILPDGSVHRLTTLVLVNAIYFKGKWSDPFPRESTTTGKFH 144
>11_01_0767 + 6438648-6438809,6439146-6440000
Length = 338
Score = 40.3 bits (90), Expect = 0.001
Identities = 23/91 (25%), Positives = 38/91 (41%), Gaps = 1/91 (1%)
Frame = +3
Query: 342 EGPYELHSELKEDAVKVFDASFEKLNFNDGAASAAA-INKWVESKTNDRIKXXXXXXXXX 518
+ Y L ++ V + + ++F + A IN WV T + I
Sbjct: 25 DASYSLKPAYRDAIVGTYKGAASTVDFKNHPVEARKEINAWVARATKNLITEVIKPESQS 84
Query: 519 XXXRVVLVNALYFKGMWKSQFSPMNTMDQPF 611
R V+ NA+YFKG W + F +T ++ F
Sbjct: 85 VDTRHVVGNAIYFKGEWLAPFDKSDTAEREF 115
>11_01_0771 + 6453130-6454488
Length = 452
Score = 37.9 bits (84), Expect = 0.006
Identities = 19/55 (34%), Positives = 24/55 (43%)
Frame = +3
Query: 450 INKWVESKTNDRIKXXXXXXXXXXXXRVVLVNALYFKGMWKSQFSPMNTMDQPFH 614
IN W T I VVL NA+YFKG W F+ +T +PF+
Sbjct: 177 INAWARRATGKLITDVLPPRSVGPETAVVLGNAIYFKGKWDRPFNESDTERKPFY 231
>11_01_0750 - 6315126-6315896,6316371-6316784
Length = 394
Score = 37.5 bits (83), Expect = 0.008
Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Frame = +3
Query: 381 AVKVFDASFEKLNFNDGAASAA-AINKWVESKTNDRIKXXXXXXXXXXXXRVVLVNALYF 557
A V+ ++ +K +F + A IN WV+ T + +VL +ALYF
Sbjct: 122 AGNVYGSAAKKADFKNKPEDAPDQINSWVKDSTKGTVTTLLPAGTIDQNTGLVLGSALYF 181
Query: 558 KGMWKSQFSPMNTMDQPFH 614
+G W + T +Q F+
Sbjct: 182 RGRWLDRDDLRRTTEQKFY 200
>04_04_0190 -
23442824-23442846,23442891-23442949,23443613-23443737,
23443767-23443901,23444195-23444301,23444488-23444566,
23444856-23444942,23445045-23445281,23445783-23446128,
23446486-23446694
Length = 468
Score = 34.7 bits (76), Expect = 0.059
Identities = 23/58 (39%), Positives = 29/58 (50%)
Frame = -2
Query: 427 SLKFNFSKEASNTLTASSFSSECSSYGPSFKYTLFAMFSVIPCIDFKLDVIEVNEERI 254
+L+F S ASNTL S CS YG FK LF +++ C I NEER+
Sbjct: 48 TLRF-LSPHASNTL-GSFLEDHCSRYGRVFKSHLFCTPTIVSCDQELNHFILQNEERL 103
>05_06_0044 - 25150322-25151260
Length = 312
Score = 34.3 bits (75), Expect = 0.078
Identities = 26/98 (26%), Positives = 37/98 (37%), Gaps = 11/98 (11%)
Frame = +3
Query: 357 LHSELKEDAVKVFDASFEKLNFNDGAASAAAINKWVESKTNDRIKXXXXXXXX------- 515
L+ + A VF A+ + AA+ A IN+W S+T +K
Sbjct: 11 LNPAFADTAASVFKAAVRSAG--NPAAARAEINEWFSSQTGGFVKDILSNSIDDDDDGSG 68
Query: 516 ----XXXXRVVLVNALYFKGMWKSQFSPMNTMDQPFHI 617
V L N+LYF W F P T + FH+
Sbjct: 69 GGGGAISASVFLANSLYFNAYWDHPFFPHLTEEGDFHV 106
>04_04_1068 + 30552935-30553234,30553424-30553623,30553738-30554122
Length = 294
Score = 33.1 bits (72), Expect = 0.18
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 5/62 (8%)
Frame = +3
Query: 201 DPAHEELLTSLDIPNDDCIRSS----FTSITSNLKSIQGITLNIANKVY-LKEGPYELHS 365
D E L SLD C RS + I +K I+G + +Y + EGP+E+H
Sbjct: 52 DGDSEALALSLDQSQGSCFRSREKYLYVQIDVEIKLIEGDSAGTVCTIYTISEGPWEIHD 111
Query: 366 EL 371
E+
Sbjct: 112 EI 113
>04_01_0216 - 2739742-2740381,2742346-2742883,2745014-2745911
Length = 691
Score = 27.9 bits (59), Expect = 6.8
Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = -2
Query: 487 ILSFVL-LSTHLLIAAADAAPSLKFNFSKEASNT 389
+LS +L S HL+ AA A P FNFS + +T
Sbjct: 16 LLSMLLDASDHLIAGAAAAPPVFSFNFSADHPST 49
>03_01_0536 - 4020235-4021161,4022760-4022808,4023203-4023267
Length = 346
Score = 27.5 bits (58), Expect = 9.0
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -2
Query: 430 PSLKFNFSKEASNTLTASSFSSECSSYG 347
PSL ++ A +S SSECSSYG
Sbjct: 108 PSLAGSYRARAPGPHATTSSSSECSSYG 135
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,195,807
Number of Sequences: 37544
Number of extensions: 213163
Number of successful extensions: 544
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 535
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 544
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1490248872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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