Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0007_F12
(216 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL117207-17|CAI79269.1| 421|Caenorhabditis elegans Hypothetical... 27 2.4
U40938-2|AAQ65206.1| 463|Caenorhabditis elegans Hypothetical pr... 25 5.5
U40938-1|AAA81695.2| 465|Caenorhabditis elegans Hypothetical pr... 25 5.5
U29154-3|AAA68419.2| 283|Caenorhabditis elegans Hypothetical pr... 25 5.5
Z70780-11|CAC35815.1| 138|Caenorhabditis elegans Hypothetical p... 25 7.3
Z81124-11|CAB03370.2| 306|Caenorhabditis elegans Hypothetical p... 25 9.7
Z78540-6|CAD30431.1| 887|Caenorhabditis elegans Hypothetical pr... 25 9.7
Z78540-5|CAB01738.2| 793|Caenorhabditis elegans Hypothetical pr... 25 9.7
Z72501-3|CAD30430.1| 887|Caenorhabditis elegans Hypothetical pr... 25 9.7
U41021-5|AAA82335.2| 652|Caenorhabditis elegans Hypothetical pr... 25 9.7
U40942-6|AAP68937.1| 709|Caenorhabditis elegans High temperatur... 25 9.7
U40942-5|AAC47068.1| 729|Caenorhabditis elegans High temperatur... 25 9.7
AY887908-1|AAX34420.1| 652|Caenorhabditis elegans anion transpo... 25 9.7
AY070228-1|AAL55425.1| 729|Caenorhabditis elegans HID-1 protein. 25 9.7
AJ133838-1|CAB44432.1| 793|Caenorhabditis elegans DYC-1 protein... 25 9.7
AF106589-1|AAC78228.2| 629|Caenorhabditis elegans Abnormal acet... 25 9.7
AF025378-1|AAC14016.2| 629|Caenorhabditis elegans acetylcholine... 25 9.7
AF016681-4|AAB66174.2| 276|Caenorhabditis elegans Hypothetical ... 25 9.7
>AL117207-17|CAI79269.1| 421|Caenorhabditis elegans Hypothetical
protein Y60A3A.25 protein.
Length = 421
Score = 26.6 bits (56), Expect = 2.4
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +1
Query: 13 IDKNGWNKSQDGNRPEWIPIQNGYRIQYPLDNN 111
+D + + QD N W+ + N + Q P DNN
Sbjct: 106 MDMQPYQEYQDNNESGWVDLNNDNQFQQP-DNN 137
>U40938-2|AAQ65206.1| 463|Caenorhabditis elegans Hypothetical
protein D1009.3b protein.
Length = 463
Score = 25.4 bits (53), Expect = 5.5
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -1
Query: 156 WELHLIRKNEGYKIIIVVQRVLNSVTILNWDPF 58
W+++ +K +GYKI I + V N +T DPF
Sbjct: 333 WKVNFGKKQDGYKIQITEEGVGN-LTYNGVDPF 364
>U40938-1|AAA81695.2| 465|Caenorhabditis elegans Hypothetical
protein D1009.3a protein.
Length = 465
Score = 25.4 bits (53), Expect = 5.5
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -1
Query: 156 WELHLIRKNEGYKIIIVVQRVLNSVTILNWDPF 58
W+++ +K +GYKI I + V N +T DPF
Sbjct: 335 WKVNFGKKQDGYKIQITEEGVGN-LTYNGVDPF 366
>U29154-3|AAA68419.2| 283|Caenorhabditis elegans Hypothetical
protein T07F12.1 protein.
Length = 283
Score = 25.4 bits (53), Expect = 5.5
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +1
Query: 52 RPEWIPIQNGYRIQYPLDNNY 114
RP WIP ++ ++ YP+ NY
Sbjct: 131 RPCWIPPKDLKKLGYPVQENY 151
>Z70780-11|CAC35815.1| 138|Caenorhabditis elegans Hypothetical
protein F46B6.12 protein.
Length = 138
Score = 25.0 bits (52), Expect = 7.3
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = +3
Query: 42 GREPSRMDPNSEWLPNSIPFG 104
G EP DP EW+ S+ G
Sbjct: 76 GLEPFDFDPRDEWIAKSVETG 96
>Z81124-11|CAB03370.2| 306|Caenorhabditis elegans Hypothetical
protein T21B4.1 protein.
Length = 306
Score = 24.6 bits (51), Expect = 9.7
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -1
Query: 72 NWDPFGTVPVLRFVPSVLVNK 10
NW FGT P++ + +L NK
Sbjct: 245 NWSNFGTTPLIIQISYLLCNK 265
>Z78540-6|CAD30431.1| 887|Caenorhabditis elegans Hypothetical
protein C33G3.1b protein.
Length = 887
Score = 24.6 bits (51), Expect = 9.7
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +3
Query: 48 EPSRMDPNSEWLPNS 92
EPS MDPN LP+S
Sbjct: 809 EPSEMDPNRNNLPSS 823
>Z78540-5|CAB01738.2| 793|Caenorhabditis elegans Hypothetical
protein C33G3.1a protein.
Length = 793
Score = 24.6 bits (51), Expect = 9.7
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +3
Query: 48 EPSRMDPNSEWLPNS 92
EPS MDPN LP+S
Sbjct: 715 EPSEMDPNRNNLPSS 729
>Z72501-3|CAD30430.1| 887|Caenorhabditis elegans Hypothetical
protein C33G3.1b protein.
Length = 887
Score = 24.6 bits (51), Expect = 9.7
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +3
Query: 48 EPSRMDPNSEWLPNS 92
EPS MDPN LP+S
Sbjct: 809 EPSEMDPNRNNLPSS 823
>U41021-5|AAA82335.2| 652|Caenorhabditis elegans Hypothetical
protein F14D12.5 protein.
Length = 652
Score = 24.6 bits (51), Expect = 9.7
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +2
Query: 158 TKHRYQVKGKHQLLAL 205
TKHRY++ +LLAL
Sbjct: 339 TKHRYRIDSNQELLAL 354
>U40942-6|AAP68937.1| 709|Caenorhabditis elegans High
temperature-induced dauerformation protein 1, isoform b
protein.
Length = 709
Score = 24.6 bits (51), Expect = 9.7
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +3
Query: 150 VPKPNTVTRSRANINS*HWWNI 215
VP P + R + NI + HW+ I
Sbjct: 679 VPHPIVIRRYQTNIGTNHWFRI 700
>U40942-5|AAC47068.1| 729|Caenorhabditis elegans High
temperature-induced dauerformation protein 1, isoform a
protein.
Length = 729
Score = 24.6 bits (51), Expect = 9.7
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +3
Query: 150 VPKPNTVTRSRANINS*HWWNI 215
VP P + R + NI + HW+ I
Sbjct: 679 VPHPIVIRRYQTNIGTNHWFRI 700
>AY887908-1|AAX34420.1| 652|Caenorhabditis elegans anion
transporter SULP-2 protein.
Length = 652
Score = 24.6 bits (51), Expect = 9.7
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +2
Query: 158 TKHRYQVKGKHQLLAL 205
TKHRY++ +LLAL
Sbjct: 339 TKHRYRIDSNQELLAL 354
>AY070228-1|AAL55425.1| 729|Caenorhabditis elegans HID-1 protein.
Length = 729
Score = 24.6 bits (51), Expect = 9.7
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +3
Query: 150 VPKPNTVTRSRANINS*HWWNI 215
VP P + R + NI + HW+ I
Sbjct: 679 VPHPIVIRRYQTNIGTNHWFRI 700
>AJ133838-1|CAB44432.1| 793|Caenorhabditis elegans DYC-1 protein
protein.
Length = 793
Score = 24.6 bits (51), Expect = 9.7
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +3
Query: 48 EPSRMDPNSEWLPNS 92
EPS MDPN LP+S
Sbjct: 715 EPSEMDPNRNNLPSS 729
>AF106589-1|AAC78228.2| 629|Caenorhabditis elegans Abnormal
acetylcholinesterase protein2 protein.
Length = 629
Score = 24.6 bits (51), Expect = 9.7
Identities = 7/20 (35%), Positives = 12/20 (60%)
Frame = +1
Query: 55 PEWIPIQNGYRIQYPLDNNY 114
P+W+ + +GY I+Y Y
Sbjct: 484 PKWMGVMHGYEIEYAFGQPY 503
>AF025378-1|AAC14016.2| 629|Caenorhabditis elegans
acetylcholinesterase protein.
Length = 629
Score = 24.6 bits (51), Expect = 9.7
Identities = 7/20 (35%), Positives = 12/20 (60%)
Frame = +1
Query: 55 PEWIPIQNGYRIQYPLDNNY 114
P+W+ + +GY I+Y Y
Sbjct: 484 PKWMGVMHGYEIEYAFGQPY 503
>AF016681-4|AAB66174.2| 276|Caenorhabditis elegans Hypothetical
protein F22E5.8 protein.
Length = 276
Score = 24.6 bits (51), Expect = 9.7
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +1
Query: 52 RPEWIPIQNGYRIQYPLDNNYN 117
R +W P +NGY Q+P + N
Sbjct: 179 RIKWKPTENGYYSQFPYNLRIN 200
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,432,535
Number of Sequences: 27780
Number of extensions: 98893
Number of successful extensions: 268
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 268
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 268
length of database: 12,740,198
effective HSP length: 51
effective length of database: 11,323,418
effective search space used: 226468360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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