Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0007_F12
         (216 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    22   0.95 
DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.              21   2.2  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    21   2.2  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          20   3.8  
DQ325133-1|ABD14147.1|  181|Apis mellifera complementary sex det...    20   3.8  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      20   3.8  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    20   3.8  
AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    19   6.7  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              19   6.7  

>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 21.8 bits (44), Expect = 0.95
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +1

Query: 4   NLFIDKNGWNKSQDGNRPEW 63
           N+F+DK G++     N  +W
Sbjct: 198 NIFLDKKGFHMDGYTNNSKW 217


>DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.
          Length = 135

 Score = 20.6 bits (41), Expect = 2.2
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +1

Query: 1   ANLFIDKNGWNK 36
           A +F+D+NG NK
Sbjct: 88  AEIFLDENGVNK 99


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 20.6 bits (41), Expect = 2.2
 Identities = 11/34 (32%), Positives = 14/34 (41%), Gaps = 8/34 (23%)
 Frame = +1

Query: 28  WNKSQDGNRPEWI--------PIQNGYRIQYPLD 105
           W     G RP W          I+ GYR+  P+D
Sbjct: 829 WEVMSYGERPYWNWSNQDVIKSIEKGYRLPAPMD 862



 Score = 18.6 bits (36), Expect = 8.8
 Identities = 7/23 (30%), Positives = 11/23 (47%)
 Frame = +2

Query: 50  TVPNGSQFRMVTEFNTLWTTIII 118
           T P    FR  T  + +W+  I+
Sbjct: 805 TAPEAIAFRKFTSASDVWSMGIV 827


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 19.8 bits (39), Expect = 3.8
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = +1

Query: 109 NYNFIAFIFPNQVQFP 156
           N+N+  F+  N + FP
Sbjct: 236 NHNYPPFMLSNSLNFP 251


>DQ325133-1|ABD14147.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 19.8 bits (39), Expect = 3.8
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = +1

Query: 97  PLDNNYNF 120
           PL NNYN+
Sbjct: 87  PLSNNYNY 94


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 19.8 bits (39), Expect = 3.8
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = +1

Query: 109 NYNFIAFIFPNQVQFP 156
           N+N+  F+  N + FP
Sbjct: 236 NHNYPPFMLSNSLNFP 251


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 19.8 bits (39), Expect = 3.8
 Identities = 5/6 (83%), Positives = 6/6 (100%)
 Frame = -3

Query: 115 YNCCPK 98
           YNCCP+
Sbjct: 211 YNCCPE 216


>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 19.0 bits (37), Expect = 6.7
 Identities = 4/13 (30%), Positives = 10/13 (76%)
 Frame = -1

Query: 78  ILNWDPFGTVPVL 40
           +L+W P+G + ++
Sbjct: 284 VLSWTPYGVMSMI 296


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 19.0 bits (37), Expect = 6.7
 Identities = 5/11 (45%), Positives = 8/11 (72%)
 Frame = -3

Query: 118 NYNCCPKGIEF 86
           +YNC P  ++F
Sbjct: 693 SYNCVPINVQF 703


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,384
Number of Sequences: 438
Number of extensions: 1466
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 46
effective length of database: 126,195
effective search space used:  3154875
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)