Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0007_F07
         (558 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            26   0.73 
AY341205-1|AAR13769.1|  285|Anopheles gambiae period protein.          24   3.9  
AY341204-1|AAR13768.1|  285|Anopheles gambiae period protein.          24   3.9  
AY341203-1|AAR13767.1|  285|Anopheles gambiae period protein.          24   3.9  
AY341202-1|AAR13766.1|  285|Anopheles gambiae period protein.          24   3.9  
AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering In...    23   5.1  
DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domai...    23   6.8  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    23   9.0  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 26.2 bits (55), Expect = 0.73
 Identities = 23/78 (29%), Positives = 32/78 (41%)
 Frame = -3

Query: 481 SNFNSSGST*ASRSTFLWLGMTTSDARPSPSERLFVPISTLYGVLGSTNASITCTSALSC 302
           S      S  +S+S  L   +T    +     R  +P S   G+LG+T   I CT A   
Sbjct: 176 STSEKDSSRESSKSPMLMKMLTDKQEQTCQWCRKVIP-SHQTGILGTTEGMIFCTEACFS 234

Query: 301 NSRLVALFVRPQVIQYYR 248
            SR  A F R +   + R
Sbjct: 235 QSRR-ASFKRAKTCDWCR 251


>AY341205-1|AAR13769.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 23.8 bits (49), Expect = 3.9
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +3

Query: 372 GTNNRSEGDGRASEVVIPSQR 434
           GTN  + GD + S  V P+QR
Sbjct: 196 GTNTETIGDEQQSHAVSPNQR 216


>AY341204-1|AAR13768.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 23.8 bits (49), Expect = 3.9
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +3

Query: 372 GTNNRSEGDGRASEVVIPSQR 434
           GTN  + GD + S  V P+QR
Sbjct: 196 GTNTETIGDEQQSHAVSPNQR 216


>AY341203-1|AAR13767.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 23.8 bits (49), Expect = 3.9
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +3

Query: 372 GTNNRSEGDGRASEVVIPSQR 434
           GTN  + GD + S  V P+QR
Sbjct: 196 GTNTETIGDEQQSHAVSPNQR 216


>AY341202-1|AAR13766.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 23.8 bits (49), Expect = 3.9
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +3

Query: 372 GTNNRSEGDGRASEVVIPSQR 434
           GTN  + GD + S  V P+QR
Sbjct: 196 GTNTETIGDEQQSHAVSPNQR 216


>AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering
           Institute proto-oncogeneproduct protein.
          Length = 358

 Score = 23.4 bits (48), Expect = 5.1
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = -1

Query: 504 DHTAQSHQVISIHPGRP 454
           DH A  H  +S H G P
Sbjct: 56  DHLASQHHALSHHAGEP 72


>DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domain
           protein protein.
          Length = 285

 Score = 23.0 bits (47), Expect = 6.8
 Identities = 8/15 (53%), Positives = 13/15 (86%)
 Frame = -2

Query: 308 VL*LAAGCSVCSSSS 264
           VL +AAGCS+C++ +
Sbjct: 135 VLIVAAGCSICAAQT 149


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 22.6 bits (46), Expect = 9.0
 Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
 Frame = -2

Query: 329 HNLYIGSVL*LAAGCSVCSSSSNPILSVGICNLCGTA-MSTTTFLIS 192
           HN  +GS     AG  V   S+ PIL+ G  N+C  A  +  TF +S
Sbjct: 840 HNQDLGS-----AGSCVRKFSTLPILACGQNNVCNYASRNDRTFWLS 881


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 581,912
Number of Sequences: 2352
Number of extensions: 11676
Number of successful extensions: 25
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 52142868
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)