Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0007_F07
(558 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF016437-1|AAB65884.2| 690|Caenorhabditis elegans Hypothetical ... 29 2.3
U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical p... 29 3.0
U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical p... 29 3.0
AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin p... 29 3.0
Z82052-5|CAB04828.1| 382|Caenorhabditis elegans Hypothetical pr... 28 4.0
Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical pr... 27 9.1
Z81085-3|CAB03115.1| 769|Caenorhabditis elegans Hypothetical pr... 27 9.1
Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical pr... 27 9.1
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 27 9.1
AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein... 27 9.1
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase... 27 9.1
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 27 9.1
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de... 27 9.1
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 27 9.1
>AF016437-1|AAB65884.2| 690|Caenorhabditis elegans Hypothetical
protein F13H6.1 protein.
Length = 690
Score = 29.1 bits (62), Expect = 2.3
Identities = 21/68 (30%), Positives = 32/68 (47%)
Frame = -3
Query: 523 GSRSPSGPHCSVAPSNFNSSGST*ASRSTFLWLGMTTSDARPSPSERLFVPISTLYGVLG 344
G +PS C V P NF+ S + + + G +TS P+ + V T LG
Sbjct: 133 GKLTPSDD-CEVTPRNFDRSRRRTFNPAALIRCGRSTSANALLPNYNMDVTTDT--NDLG 189
Query: 343 STNASITC 320
S++ S+TC
Sbjct: 190 SSSKSLTC 197
>U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical
protein K07E12.1b protein.
Length = 12268
Score = 28.7 bits (61), Expect = 3.0
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = +3
Query: 306 DRADVQVMEAFVEPNTPYRVEI-GTNNRSEG 395
D +V + + PNTPY++ I TN+ SEG
Sbjct: 1093 DHGEVTLPKEQFNPNTPYKIRISATNDLSEG 1123
>U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical
protein K07E12.1a protein.
Length = 13100
Score = 28.7 bits (61), Expect = 3.0
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = +3
Query: 306 DRADVQVMEAFVEPNTPYRVEI-GTNNRSEG 395
D +V + + PNTPY++ I TN+ SEG
Sbjct: 1156 DHGEVTLPKEQFNPNTPYKIRISATNDLSEG 1186
>AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin
protein.
Length = 13100
Score = 28.7 bits (61), Expect = 3.0
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = +3
Query: 306 DRADVQVMEAFVEPNTPYRVEI-GTNNRSEG 395
D +V + + PNTPY++ I TN+ SEG
Sbjct: 1156 DHGEVTLPKEQFNPNTPYKIRISATNDLSEG 1186
>Z82052-5|CAB04828.1| 382|Caenorhabditis elegans Hypothetical
protein T25E12.10 protein.
Length = 382
Score = 28.3 bits (60), Expect = 4.0
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +2
Query: 284 SNQPRVTGQSRCTGYGG 334
SNQPR S C GYGG
Sbjct: 139 SNQPRTEADSICKGYGG 155
>Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 27.1 bits (57), Expect = 9.1
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 310 EPMYRLWRRL*SLILHIELRSVRIIVLKVTAVRRRLSSQAKETLIWKLRSTRMN 471
+P LW+ + +I I LRSV + + R++ QA + L+ ++R T N
Sbjct: 2502 QPARELWQSIQGIIDEIRLRSVHVTGAHDASPNRQVRQQAAQ-LLTEMRRTIEN 2554
>Z81085-3|CAB03115.1| 769|Caenorhabditis elegans Hypothetical
protein F46F3.4 protein.
Length = 769
Score = 27.1 bits (57), Expect = 9.1
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +1
Query: 175 EENIQTDIKNVVVLIAVPQRLQIPTDNIGLLEDEQTEQPAASYRT 309
EE + ++ K V L++PT+ + L D TE+ A+S T
Sbjct: 470 EEVVNSESKQVATSSDSTNNLELPTEQMVLGSDTTTEEDASSCST 514
>Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 27.1 bits (57), Expect = 9.1
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 310 EPMYRLWRRL*SLILHIELRSVRIIVLKVTAVRRRLSSQAKETLIWKLRSTRMN 471
+P LW+ + +I I LRSV + + R++ QA + L+ ++R T N
Sbjct: 2502 QPARELWQSIQGIIDEIRLRSVHVTGAHDASPNRQVRQQAAQ-LLTEMRRTIEN 2554
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 27.1 bits (57), Expect = 9.1
Identities = 22/94 (23%), Positives = 36/94 (38%), Gaps = 1/94 (1%)
Frame = -3
Query: 556 GCDRSLHTRVTGSRS-PSGPHCSVAPSNFNSSGST*ASRSTFLWLGMTTSDARPSPSERL 380
G S + T S S P+ P +V S + ++ AS ST T+ PS +
Sbjct: 489 GVPTSTSNQPTPSTSNPTTPKSTVTASPSTTGATSTASPSTITSSAPTSQSHSPSSTMTS 548
Query: 379 FVPISTLYGVLGSTNASITCTSALSCNSRLVALF 278
VP+++ + +T C S + F
Sbjct: 549 TVPVTSTFASTTTTVPITVAPGQCYCQSNVAVAF 582
>AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein
protein.
Length = 3674
Score = 27.1 bits (57), Expect = 9.1
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 310 EPMYRLWRRL*SLILHIELRSVRIIVLKVTAVRRRLSSQAKETLIWKLRSTRMN 471
+P LW+ + +I I LRSV + + R++ QA + L+ ++R T N
Sbjct: 2502 QPARELWQSIQGIIDEIRLRSVHVTGAHDASPNRQVRQQAAQ-LLTEMRRTIEN 2554
>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
beta protein.
Length = 1418
Score = 27.1 bits (57), Expect = 9.1
Identities = 21/55 (38%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
Frame = -3
Query: 550 DRSLHTRV---TGSRSPSGPHCSVAPSNFNSSGST*ASRSTFLWLGMTTSDARPS 395
D+ H V S SP+ P S P SSGST S T G +TS + PS
Sbjct: 639 DQRAHPEVEQPVSSSSPATPSISGPPPCATSSGST--SSITITTTGCSTSSSGPS 691
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 27.1 bits (57), Expect = 9.1
Identities = 21/55 (38%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
Frame = -3
Query: 550 DRSLHTRV---TGSRSPSGPHCSVAPSNFNSSGST*ASRSTFLWLGMTTSDARPS 395
D+ H V S SP+ P S P SSGST S T G +TS + PS
Sbjct: 640 DQRAHPEVEQPVSSSSPATPSISGPPPCATSSGST--SSITITTTGCSTSSSGPS 692
>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
defective protein 8,isoform a protein.
Length = 1419
Score = 27.1 bits (57), Expect = 9.1
Identities = 21/55 (38%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
Frame = -3
Query: 550 DRSLHTRV---TGSRSPSGPHCSVAPSNFNSSGST*ASRSTFLWLGMTTSDARPS 395
D+ H V S SP+ P S P SSGST S T G +TS + PS
Sbjct: 640 DQRAHPEVEQPVSSSSPATPSISGPPPCATSSGST--SSITITTTGCSTSSSGPS 692
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 27.1 bits (57), Expect = 9.1
Identities = 21/55 (38%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
Frame = -3
Query: 550 DRSLHTRV---TGSRSPSGPHCSVAPSNFNSSGST*ASRSTFLWLGMTTSDARPS 395
D+ H V S SP+ P S P SSGST S T G +TS + PS
Sbjct: 640 DQRAHPEVEQPVSSSSPATPSISGPPPCATSSGST--SSITITTTGCSTSSSGPS 692
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,711,363
Number of Sequences: 27780
Number of extensions: 263371
Number of successful extensions: 857
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 828
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 856
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1144922904
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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