Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0007_F07
         (558 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY588474-1|AAT94401.1|  104|Apis mellifera defensin 2 protein.         24   0.91 
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    23   1.6  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    23   1.6  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    23   1.6  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    22   3.7  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    22   4.8  

>AY588474-1|AAT94401.1|  104|Apis mellifera defensin 2 protein.
          Length = 104

 Score = 24.2 bits (50), Expect = 0.91
 Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
 Frame = +1

Query: 82  LLIARIMLIIFASLFAT---AFAAPVFYDLRQDGEENIQTD 195
           +L A ++ I+ AS  +     +  P+ Y+LRQ  EENI+ D
Sbjct: 5   VLFAILIAIVHASCASVPKVVYDGPI-YELRQIEEENIEPD 44


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 13/37 (35%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
 Frame = +1

Query: 358 IELRSVRIIVLKV-TAVRRRLSSQAKETLIWKLRSTR 465
           I L  + ++ L++  A RRRL  +A+++ I  ++STR
Sbjct: 207 IPLLLMSLVYLEIYLATRRRLRERARQSRINAVQSTR 243


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 13/37 (35%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
 Frame = +1

Query: 358 IELRSVRIIVLKV-TAVRRRLSSQAKETLIWKLRSTR 465
           I L  + ++ L++  A RRRL  +A+++ I  ++STR
Sbjct: 207 IPLLLMSLVYLEIYLATRRRLRERARQSRINAVQSTR 243


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 13/37 (35%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
 Frame = +1

Query: 358 IELRSVRIIVLKV-TAVRRRLSSQAKETLIWKLRSTR 465
           I L  + ++ L++  A RRRL  +A+++ I  ++STR
Sbjct: 207 IPLLLMSLVYLEIYLATRRRLRERARQSRINAVQSTR 243


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = -3

Query: 556 GCDRSLHTRVTGSRSPSGPHCSVAPSNFN 470
           G D  L    TG++  SG H SV+    N
Sbjct: 287 GSDAELICVTTGTKCVSGEHLSVSGGALN 315


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +2

Query: 116 RRCSRQRSPHPYSTTYGKTGRKTFKPIS 199
           RR S+  SP P  +T+    R+ + PI+
Sbjct: 652 RRGSKIGSPTPAESTFIPEERRIYSPIT 679


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,808
Number of Sequences: 438
Number of extensions: 3276
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16072521
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)