Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0007_F06
         (585 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF003140-9|AAB54171.1|   86|Caenorhabditis elegans Acyl-coenzyme...   101   4e-22
Z46794-8|CAA86779.1|  385|Caenorhabditis elegans Hypothetical pr...    81   8e-16
Z68004-6|CAA91987.2|  116|Caenorhabditis elegans Hypothetical pr...    60   2e-09
AL023828-1|CAA19448.1|  115|Caenorhabditis elegans Hypothetical ...    55   4e-08
Z92826-2|CAB07319.1|  266|Caenorhabditis elegans Hypothetical pr...    50   1e-06
U00063-1|AAK18960.1|  146|Caenorhabditis elegans Acyl-coenzyme a...    48   5e-06
Z81120-7|CAB03343.2|  274|Caenorhabditis elegans Hypothetical pr...    44   1e-04
Z95559-11|CAB09005.2|  435|Caenorhabditis elegans Hypothetical p...    32   0.26 
U27312-8|AAZ32809.1|  219|Caenorhabditis elegans Hypothetical pr...    31   0.46 
AF045641-5|AAC02577.2|  554|Caenorhabditis elegans Hypothetical ...    29   3.2  
Z68751-3|CAA92973.1|  760|Caenorhabditis elegans Hypothetical pr...    28   5.6  

>AF003140-9|AAB54171.1|   86|Caenorhabditis elegans Acyl-coenzyme a
           binding proteinprotein 1 protein.
          Length = 86

 Score =  101 bits (242), Expect = 4e-22
 Identities = 47/82 (57%), Positives = 63/82 (76%)
 Frame = +2

Query: 65  FDQAAANVRNLKSVPSDSDLLELYALFKQATSGDADPANRPGLLDLRGKAKFDAWHKKAG 244
           FD AAA V+ LK+ PS+ +LL+LYALFKQ T GD +  ++PG+ DL+GKAK+ AW +K G
Sbjct: 5   FDDAAATVKTLKTSPSNDELLKLYALFKQGTVGD-NTTDKPGMFDLKGKAKWSAWDEKKG 63

Query: 245 TSKEDAQKAYIAKVEGLVASIG 310
            +K+DAQKAY+A VE L+A  G
Sbjct: 64  LAKDDAQKAYVALVEELIAKYG 85


>Z46794-8|CAA86779.1|  385|Caenorhabditis elegans Hypothetical
           protein R06F6.9 protein.
          Length = 385

 Score = 80.6 bits (190), Expect = 8e-16
 Identities = 41/99 (41%), Positives = 62/99 (62%)
 Frame = +2

Query: 5   RSLLYLNLPIS*VIMSLQEQFDQAAANVRNLKSVPSDSDLLELYALFKQATSGDADPANR 184
           RS+LY N  +S    S Q  F++A  N++ LK  P +   L+LY LFKQAT+GD     R
Sbjct: 10  RSVLY-NPQVSVRSFSAQADFEKAQKNLKTLKEEPDNDVKLQLYGLFKQATAGDVQ-GKR 67

Query: 185 PGLLDLRGKAKFDAWHKKAGTSKEDAQKAYIAKVEGLVA 301
           PG++D  G+AK+DAW+   G ++++A+  Y   V GL++
Sbjct: 68  PGMMDFVGRAKYDAWNTLKGQTQDEARANYAKLVGGLIS 106


>Z68004-6|CAA91987.2|  116|Caenorhabditis elegans Hypothetical
           protein F47B10.7 protein.
          Length = 116

 Score = 59.7 bits (138), Expect = 2e-09
 Identities = 33/91 (36%), Positives = 55/91 (60%), Gaps = 4/91 (4%)
 Frame = +2

Query: 47  MSLQEQFDQAAANVRNL-KSVP---SDSDLLELYALFKQATSGDADPANRPGLLDLRGKA 214
           MSLQE+FD A   ++ L K+ P   S+   L  Y+LFKQA+ GD +  +RPG+  +  + 
Sbjct: 1   MSLQEKFDAAVEIIQKLPKTGPVATSNDQKLTFYSLFKQASIGDVN-TDRPGIFSIIERK 59

Query: 215 KFDAWHKKAGTSKEDAQKAYIAKVEGLVASI 307
           K+D+W +  G S+++A++ YI  +  +   I
Sbjct: 60  KWDSWKELEGVSQDEAKERYIKALNDMFDKI 90


>AL023828-1|CAA19448.1|  115|Caenorhabditis elegans Hypothetical
           protein Y17G7B.1 protein.
          Length = 115

 Score = 54.8 bits (126), Expect = 4e-08
 Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
 Frame = +2

Query: 65  FDQAAANVRNLKSVPSDSDLLELYALFKQATSGDA--DPANRPGLLDLRGKAKFDAWHKK 238
           F+ AA  +R LKS P+D + L+LYAL+KQA  GD   +        D  G+ K+ AW  +
Sbjct: 15  FEIAAEEMRRLKSEPTDRERLKLYALYKQALHGDIPNEDVYPVPAGDEVGRKKYAAWKSQ 74

Query: 239 AGTSKEDAQKAYIAKVEGLVASIG 310
            G + E  +  Y+A  E ++   G
Sbjct: 75  KGANSEKCRADYVAIAEEMIKKYG 98


>Z92826-2|CAB07319.1|  266|Caenorhabditis elegans Hypothetical
           protein C18D11.2 protein.
          Length = 266

 Score = 50.0 bits (114), Expect = 1e-06
 Identities = 29/78 (37%), Positives = 45/78 (57%), Gaps = 4/78 (5%)
 Frame = +2

Query: 65  FDQAAANVRNL-KSVP---SDSDLLELYALFKQATSGDADPANRPGLLDLRGKAKFDAWH 232
           F+ A   V+NL K  P   S  + L  YALFKQAT G  D   +P   D++G  K++AW+
Sbjct: 4   FETAVFIVQNLPKDGPIKTSTDEKLNFYALFKQATHGKCD-LPKPSFYDIQGVYKWNAWN 62

Query: 233 KKAGTSKEDAQKAYIAKV 286
           K    + ++A++AY+  +
Sbjct: 63  KLDNMTMDEAKQAYVDSI 80


>U00063-1|AAK18960.1|  146|Caenorhabditis elegans Acyl-coenzyme a
           binding proteinprotein 4 protein.
          Length = 146

 Score = 48.0 bits (109), Expect = 5e-06
 Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 4/83 (4%)
 Frame = +2

Query: 50  SLQEQFDQAAANVRNL-KSVP---SDSDLLELYALFKQATSGDADPANRPGLLDLRGKAK 217
           SL EQF+ A   +  L K+ P   S +D L++Y+L+KQATSG  D   +P    +  + K
Sbjct: 4   SLDEQFEAAVWIINALPKNGPIKTSINDQLQMYSLYKQATSGKCDTI-QPYFFQIEQRMK 62

Query: 218 FDAWHKKAGTSKEDAQKAYIAKV 286
           ++AW++     + +A+  Y+ K+
Sbjct: 63  WNAWNQLGNMDEAEAKAQYVEKM 85


>Z81120-7|CAB03343.2|  274|Caenorhabditis elegans Hypothetical
           protein T12D8.3 protein.
          Length = 274

 Score = 43.6 bits (98), Expect = 1e-04
 Identities = 21/74 (28%), Positives = 35/74 (47%)
 Frame = +2

Query: 53  LQEQFDQAAANVRNLKSVPSDSDLLELYALFKQATSGDADPANRPGLLDLRGKAKFDAWH 232
           L+ +FD A   +    +      +L+ Y L+KQA  G AD    P   +   + KF++W 
Sbjct: 28  LEAKFDAATTRLPGFLTKIDQKTILKFYGLYKQAVEGPADSKKGPYWFETVARKKFNSWL 87

Query: 233 KKAGTSKEDAQKAY 274
             +  S+  A +AY
Sbjct: 88  ANSQMSRSRAMEAY 101


>Z95559-11|CAB09005.2|  435|Caenorhabditis elegans Hypothetical
           protein Y41E3.7a protein.
          Length = 435

 Score = 32.3 bits (70), Expect = 0.26
 Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
 Frame = +2

Query: 119 DLLELYALFKQATSGD-ADPANRPGLLDLRGKAKFDAWHKKAGTSKEDAQKAYIAKVE 289
           D ++L +L KQ   G+ +D  +  G LD+ G     AW +    S+++A  +++  V+
Sbjct: 49  DRIKLLSLSKQVQHGEISDEFDNAGWLDITGNDVNKAWRELGSLSRDEAMASFVFLVD 106


>U27312-8|AAZ32809.1|  219|Caenorhabditis elegans Hypothetical
           protein F26A1.15 protein.
          Length = 219

 Score = 31.5 bits (68), Expect = 0.46
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = +2

Query: 200 LRGKAKFDAWHKKAGTSKEDAQKAYIAKVEGLVASI 307
           + G  K+ AW+K  G +KE+A + Y+  V+ L   I
Sbjct: 157 INGNEKWHAWNKCRGLTKEEASEQYVEAVQKLKIDI 192


>AF045641-5|AAC02577.2|  554|Caenorhabditis elegans Hypothetical
           protein F53H1.3 protein.
          Length = 554

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
 Frame = -2

Query: 302 MRRDLLPSQCMPSGRLPLKCRLSYATHRT*PCPS-NRGDQGDWQGQHRR 159
           +++++ P + +PS R P       AT  T   PS   G +GDWQG +RR
Sbjct: 405 LKKEMSPFKGIPSTR-PFSMDDFLATLETNGGPSLTCGTKGDWQGLYRR 452


>Z68751-3|CAA92973.1|  760|Caenorhabditis elegans Hypothetical
           protein T05E11.3 protein.
          Length = 760

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 22/79 (27%), Positives = 39/79 (49%)
 Frame = +2

Query: 65  FDQAAANVRNLKSVPSDSDLLELYALFKQATSGDADPANRPGLLDLRGKAKFDAWHKKAG 244
           + + + N++ L  +   S+ + L  L +  +S DAD          R K K DA +  AG
Sbjct: 462 WSEFSTNIK-LGVMEDPSNRMRLAKLLRFQSSNDADKTTTLAAYVERMKEKQDAIYYMAG 520

Query: 245 TSKEDAQKAYIAKVEGLVA 301
           TS+++ + +    VE L+A
Sbjct: 521 TSRKEVETSPF--VERLIA 537


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,479,895
Number of Sequences: 27780
Number of extensions: 249342
Number of successful extensions: 535
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 511
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 529
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1226509528
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)