Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0007_F05
(429 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC25H2.14 |mug16||UNC-50 family protein|Schizosaccharomyces po... 48 6e-07
SPBC25H2.13c |cdc20|pol2|DNA polymerase epsilon catalytic subuni... 26 2.9
SPAP8A3.12c |||tripeptidylpeptidase |Schizosaccharomyces pombe|c... 26 2.9
SPBC19C7.03 |cyr1|git2|adenylate cyclase|Schizosaccharomyces pom... 25 3.8
SPCC24B10.15 |||PINc domain|Schizosaccharomyces pombe|chr 3|||Ma... 25 3.8
SPAC22G7.10 |||mRNA cleavage and polyadenylation specificity fac... 25 5.0
SPAPB1E7.09 |ogm2|oma2|protein O-mannosyltransferase Ogm2|Schizo... 25 5.0
SPBC428.04 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 25 6.6
SPBC4C3.06 |||actin cytoskeletal protein Syp1|Schizosaccharomyce... 25 6.6
SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein ... 24 8.7
SPAC24C9.07c |bgs2|meu21, pgs2|1,3-beta-glucan synthase subunit ... 24 8.7
>SPBC25H2.14 |mug16||UNC-50 family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 235
Score = 48.0 bits (109), Expect = 6e-07
Identities = 20/45 (44%), Positives = 30/45 (66%)
Frame = +2
Query: 293 RLFKFNQMDFEFAAWQMVYLFISPQKVFRNFNYRKHTKSQFARDD 427
RL K +QMDFE A W M LF +P++V+R+ RK +++ R+D
Sbjct: 10 RLLKLSQMDFERAWWDMANLFRAPRRVYRSITLRKQNINRYGRED 54
>SPBC25H2.13c |cdc20|pol2|DNA polymerase epsilon catalytic subunit a
Pol2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 2199
Score = 25.8 bits (54), Expect = 2.9
Identities = 7/14 (50%), Positives = 13/14 (92%)
Frame = +3
Query: 321 LNLQLGKWFTYSFH 362
LN+++G+W+T S+H
Sbjct: 239 LNIRVGQWYTVSYH 252
>SPAP8A3.12c |||tripeptidylpeptidase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1274
Score = 25.8 bits (54), Expect = 2.9
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -3
Query: 268 SGTSRRSLIISRGWQRRSASWKV 200
+G S R+L +S+ W+ S WKV
Sbjct: 151 TGRSGRTLKLSKEWKNPSKKWKV 173
>SPBC19C7.03 |cyr1|git2|adenylate cyclase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1692
Score = 25.4 bits (53), Expect = 3.8
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +2
Query: 161 NMKYSTSPTPCLNNFPRSASPLPAPANY 244
N K+S +P+ LN+F + SP P Y
Sbjct: 969 NTKFSNAPSDVLNHFIQRNSPQPNILRY 996
>SPCC24B10.15 |||PINc domain|Schizosaccharomyces pombe|chr
3|||Manual
Length = 462
Score = 25.4 bits (53), Expect = 3.8
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = +2
Query: 167 KYSTSPTPCLNNFPRSASPLPAPANYQATTASAAXKRYKYLRRLFKF 307
++STS P L+ S+ P+P+ + A++ S A K +Y + L F
Sbjct: 24 RWSTSHIPSLSEINPSSFQSPSPSPF-ASSTSLASKPARYSKPLGLF 69
>SPAC22G7.10 |||mRNA cleavage and polyadenylation specificity factor
complex subunit, Fip1 homolog |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 344
Score = 25.0 bits (52), Expect = 5.0
Identities = 13/44 (29%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = +2
Query: 158 TNMKYSTSPT--PCLNNFPRSASPLPAPANYQATTASAAXKRYK 283
TN S P+ P +N+P S+ P+P Y ++ + RY+
Sbjct: 297 TNYNASRPPSNHPHSSNYPSSSRRKPSPDRYSNYSSRGSGGRYR 340
>SPAPB1E7.09 |ogm2|oma2|protein O-mannosyltransferase
Ogm2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 739
Score = 25.0 bits (52), Expect = 5.0
Identities = 18/52 (34%), Positives = 24/52 (46%)
Frame = +2
Query: 5 LQPTLCNLFRKINRFM*DIIQFRKFPSYLYRHIISSFEINAII*VYH*INFT 160
L TLC L ++ + I +F S L IIS+F + VYH FT
Sbjct: 171 LAATLCTLMVALDNHLATISRFILLDSMLLFFIISTFFCLSRYHVYHKAPFT 222
>SPBC428.04 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 115
Score = 24.6 bits (51), Expect = 6.6
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -2
Query: 191 KALEKWNTSCL*NLFNGILKL 129
K+ EK+ TS L +LFNG L L
Sbjct: 36 KSFEKYETSFLKSLFNGNLGL 56
>SPBC4C3.06 |||actin cytoskeletal protein Syp1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 818
Score = 24.6 bits (51), Expect = 6.6
Identities = 19/75 (25%), Positives = 37/75 (49%), Gaps = 7/75 (9%)
Frame = -3
Query: 268 SGTSRRSLIISRGWQRRSASWKVIKTRR----WRS--GILHVCKIYLMVYLNYSIYFKTT 107
+G S L + + W+ +S +I + WR+ LH+ K+ ++VYL ++ K+
Sbjct: 648 NGASCIPLTVVQKWKHDESSSSMIAFVKPNPVWRNLGSSLHIEKLVIIVYLGENVLVKSC 707
Query: 106 NYMSV-QITRKFTKL 65
+ +RK +KL
Sbjct: 708 QSSPAGEFSRKTSKL 722
>SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein
Lsb1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 296
Score = 24.2 bits (50), Expect = 8.7
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = +2
Query: 164 MKYSTSPTPCLNNFPRSASPLPAPANYQAT 253
+K P P N+P +AS P YQ T
Sbjct: 202 VKAQPPPPPPQQNYPPAASSSAPPMQYQQT 231
>SPAC24C9.07c |bgs2|meu21, pgs2|1,3-beta-glucan synthase subunit
Bgs2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1894
Score = 24.2 bits (50), Expect = 8.7
Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 3/33 (9%)
Frame = +2
Query: 149 INFTNMKYST---SPTPCLNNFPRSASPLPAPA 238
I+FT Y T SPT NF +S P P P+
Sbjct: 492 IHFTTYWYYTVFNSPTIIEKNFRQSVGPKPIPS 524
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,659,866
Number of Sequences: 5004
Number of extensions: 31308
Number of successful extensions: 84
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 82
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 84
length of database: 2,362,478
effective HSP length: 66
effective length of database: 2,032,214
effective search space used: 154448264
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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