Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0007_F05
         (429 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    23   1.9  
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    23   1.9  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    23   1.9  
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    23   1.9  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    21   4.4  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   5.8  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   5.8  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    21   7.7  

>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 10/31 (32%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
 Frame = -3

Query: 337 PSCKFKIHLVEFEQSSQVFI-PFXSGTSRRS 248
           P C F I  + +EQ++  ++     GT R+S
Sbjct: 198 PLCSFAIESISYEQTAITYVWKNDEGTLRKS 228


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 10/31 (32%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
 Frame = -3

Query: 337 PSCKFKIHLVEFEQSSQVFI-PFXSGTSRRS 248
           P C F I  + +EQ++  ++     GT R+S
Sbjct: 198 PLCSFAIESISYEQTAITYVWKNDEGTLRKS 228


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 10/31 (32%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
 Frame = -3

Query: 337 PSCKFKIHLVEFEQSSQVFI-PFXSGTSRRS 248
           P C F I  + +EQ++  ++     GT R+S
Sbjct: 249 PLCSFAIESISYEQTAITYVWKNDEGTLRKS 279


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 10/31 (32%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
 Frame = -3

Query: 337 PSCKFKIHLVEFEQSSQVFI-PFXSGTSRRS 248
           P C F I  + +EQ++  ++     GT R+S
Sbjct: 198 PLCSFAIESISYEQTAITYVWKNDEGTLRKS 228


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 21.4 bits (43), Expect = 4.4
 Identities = 7/28 (25%), Positives = 15/28 (53%)
 Frame = +2

Query: 326 FAAWQMVYLFISPQKVFRNFNYRKHTKS 409
           F AW +  +F  P   + + NY ++ ++
Sbjct: 155 FGAWLIALIFAMPFATYVDINYVEYPQN 182


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 10/44 (22%), Positives = 20/44 (45%)
 Frame = +2

Query: 206 PRSASPLPAPANYQATTASAAXKRYKYLRRLFKFNQMDFEFAAW 337
           PRS +  P+PA   A+T +   +  +  + L +    ++    W
Sbjct: 738 PRSPNASPSPAEQCASTTTITARSPQGSQGLLQCATSNYSTTRW 781


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +2

Query: 14  TLCNLFRKIN 43
           T CN+FRK N
Sbjct: 717 TTCNMFRKTN 726


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +2

Query: 200 NFPRSASPLPAPANYQATT 256
           N   S   LPAPAN++  T
Sbjct: 384 NLDPSNRKLPAPANWKKDT 402


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,756
Number of Sequences: 438
Number of extensions: 2492
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 11121030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)