Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0007_F04
(463 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82266-15|CAD36491.1| 608|Caenorhabditis elegans Hypothetical p... 31 0.53
Z82266-14|CAD36490.1| 467|Caenorhabditis elegans Hypothetical p... 31 0.53
Z82266-10|CAJ80811.1| 331|Caenorhabditis elegans Hypothetical p... 31 0.53
Z68213-9|CAD37352.1| 608|Caenorhabditis elegans Hypothetical pr... 31 0.53
Z68213-8|CAA92439.3| 467|Caenorhabditis elegans Hypothetical pr... 31 0.53
Z99942-7|CAB17070.2| 462|Caenorhabditis elegans Hypothetical pr... 28 2.8
AF039043-9|AAB94196.1| 427|Caenorhabditis elegans Tetraspanin f... 28 3.7
AF039043-8|AAL02514.1| 451|Caenorhabditis elegans Tetraspanin f... 28 3.7
Z70270-6|CAA94226.2| 323|Caenorhabditis elegans Hypothetical pr... 27 4.9
AF039719-12|AAB96758.1| 293|Caenorhabditis elegans Hypothetical... 27 6.5
U58754-2|AAB00671.1| 391|Caenorhabditis elegans Hypothetical pr... 27 8.6
AL021480-3|CAA16328.1| 410|Caenorhabditis elegans Hypothetical ... 27 8.6
AF016446-4|AAC24164.1| 321|Caenorhabditis elegans Serpentine re... 27 8.6
>Z82266-15|CAD36491.1| 608|Caenorhabditis elegans Hypothetical
protein C01F6.6b protein.
Length = 608
Score = 30.7 bits (66), Expect = 0.53
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -1
Query: 241 RQSGVFITSSHS*EASFRGDDHQNHH*YGERHDHRH 134
R+S V + SH S+ + HQ H + + H H H
Sbjct: 508 RESAVDVPVSHQYVPSYATESHQKHEQHSQTHHHHH 543
>Z82266-14|CAD36490.1| 467|Caenorhabditis elegans Hypothetical
protein C01F6.6a protein.
Length = 467
Score = 30.7 bits (66), Expect = 0.53
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -1
Query: 241 RQSGVFITSSHS*EASFRGDDHQNHH*YGERHDHRH 134
R+S V + SH S+ + HQ H + + H H H
Sbjct: 367 RESAVDVPVSHQYVPSYATESHQKHEQHSQTHHHHH 402
>Z82266-10|CAJ80811.1| 331|Caenorhabditis elegans Hypothetical
protein C01F6.6e protein.
Length = 331
Score = 30.7 bits (66), Expect = 0.53
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -1
Query: 241 RQSGVFITSSHS*EASFRGDDHQNHH*YGERHDHRH 134
R+S V + SH S+ + HQ H + + H H H
Sbjct: 231 RESAVDVPVSHQYVPSYATESHQKHEQHSQTHHHHH 266
>Z68213-9|CAD37352.1| 608|Caenorhabditis elegans Hypothetical
protein C01F6.6b protein.
Length = 608
Score = 30.7 bits (66), Expect = 0.53
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -1
Query: 241 RQSGVFITSSHS*EASFRGDDHQNHH*YGERHDHRH 134
R+S V + SH S+ + HQ H + + H H H
Sbjct: 508 RESAVDVPVSHQYVPSYATESHQKHEQHSQTHHHHH 543
>Z68213-8|CAA92439.3| 467|Caenorhabditis elegans Hypothetical
protein C01F6.6a protein.
Length = 467
Score = 30.7 bits (66), Expect = 0.53
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -1
Query: 241 RQSGVFITSSHS*EASFRGDDHQNHH*YGERHDHRH 134
R+S V + SH S+ + HQ H + + H H H
Sbjct: 367 RESAVDVPVSHQYVPSYATESHQKHEQHSQTHHHHH 402
>Z99942-7|CAB17070.2| 462|Caenorhabditis elegans Hypothetical
protein H13N06.5 protein.
Length = 462
Score = 28.3 bits (60), Expect = 2.8
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -1
Query: 178 HQNHH*YGERHDHRHAKNSHNFIR*KHFHDD 86
H + H +G HDH HA + H H HD+
Sbjct: 80 HAHDHDHGHAHDHGHAHDHHG-----HSHDE 105
>AF039043-9|AAB94196.1| 427|Caenorhabditis elegans Tetraspanin
family protein 14,isoform a protein.
Length = 427
Score = 27.9 bits (59), Expect = 3.7
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = +2
Query: 26 DNVYIFYCLVLCLFLTYFFKIIVKM 100
DN+++ C C+FL+Y + V +
Sbjct: 97 DNIFLLKCFAACVFLSYILVVAVTL 121
>AF039043-8|AAL02514.1| 451|Caenorhabditis elegans Tetraspanin
family protein 14,isoform b protein.
Length = 451
Score = 27.9 bits (59), Expect = 3.7
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = +2
Query: 26 DNVYIFYCLVLCLFLTYFFKIIVKM 100
DN+++ C C+FL+Y + V +
Sbjct: 121 DNIFLLKCFAACVFLSYILVVAVTL 145
>Z70270-6|CAA94226.2| 323|Caenorhabditis elegans Hypothetical
protein C53D6.4 protein.
Length = 323
Score = 27.5 bits (58), Expect = 4.9
Identities = 11/33 (33%), Positives = 22/33 (66%)
Frame = +2
Query: 23 IDNVYIFYCLVLCLFLTYFFKIIVKMFLSYEVM 121
++ +YIF CL++CL T+ + + ++ LS V+
Sbjct: 242 VNGLYIFACLLVCL-ATFIYHVRERILLSAPVL 273
>AF039719-12|AAB96758.1| 293|Caenorhabditis elegans Hypothetical
protein K04F10.7 protein.
Length = 293
Score = 27.1 bits (57), Expect = 6.5
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = -1
Query: 181 DHQNHH*YGERHDHRHAKNSH 119
DH++HH ++H HR + + H
Sbjct: 149 DHKDHHRRDDKHHHRDSNHRH 169
>U58754-2|AAB00671.1| 391|Caenorhabditis elegans Hypothetical
protein C39H7.4 protein.
Length = 391
Score = 26.6 bits (56), Expect = 8.6
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +2
Query: 206 RVGARNKHATLSGVLLLPPSAMQLPKSVEMAPLATY 313
R+ ATLSG L P A LP+S ++ TY
Sbjct: 21 RIAIAPPSATLSGAHYLSPHASTLPRSNDVLTSPTY 56
>AL021480-3|CAA16328.1| 410|Caenorhabditis elegans Hypothetical
protein Y39E4A.2b protein.
Length = 410
Score = 26.6 bits (56), Expect = 8.6
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = -1
Query: 181 DHQNHH*YGERHDHRHAKNSHNFIR*KHFHDDFKKIC 71
D +HH +G H H H + H+ H +DD C
Sbjct: 46 DSIDHHHHGHGHGHSHGGHGHSH---THNNDDSSSDC 79
>AF016446-4|AAC24164.1| 321|Caenorhabditis elegans Serpentine
receptor, class h protein23 protein.
Length = 321
Score = 26.6 bits (56), Expect = 8.6
Identities = 13/49 (26%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Frame = +1
Query: 34 LHFLLFSALFI--FDIFF*NHRENVSIV*SYGCFWRVYDRVFLRISGDF 174
+HF+ F+ F +FF + V + Y W V++ +F + DF
Sbjct: 18 IHFVSLPTYFLALFSLFF--IKSKVFVTYRYFLLWHVFENLFFEMHSDF 64
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,573,383
Number of Sequences: 27780
Number of extensions: 210667
Number of successful extensions: 559
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 516
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 550
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 818426686
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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