Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0007_F04
         (463 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    23   2.1  
U15955-1|AAA67443.1|   95|Apis mellifera defensin precursor prot...    21   6.5  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   6.5  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   6.5  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    21   8.5  
AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter...    21   8.5  
AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter...    21   8.5  

>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = -1

Query: 172 NHH*YGERHDHRHAKNSHN 116
           +HH  G  H H HA   H+
Sbjct: 415 HHHTMGHGHSHIHATPHHH 433


>U15955-1|AAA67443.1|   95|Apis mellifera defensin precursor
           protein.
          Length = 95

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 7/25 (28%), Positives = 14/25 (56%)
 Frame = -2

Query: 276 SCIALGGRSSTPDRVACLLRAPTLK 202
           +C++LG      ++V C+ R  + K
Sbjct: 63  NCLSLGKAGGHCEKVGCICRKTSFK 87


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +3

Query: 180 SSPRNEAS*EWELVINTPL 236
           S+P  EAS E  L++  PL
Sbjct: 313 SNPGGEASAEIRLIVTAPL 331


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +3

Query: 180 SSPRNEAS*EWELVINTPL 236
           S+P  EAS E  L++  PL
Sbjct: 313 SNPGGEASAEIRLIVTAPL 331


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -2

Query: 264 LGGRSSTPDRVAC 226
           LGGR+ T  RV C
Sbjct: 344 LGGRTDTTYRVVC 356


>AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 593

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -3

Query: 401 GILWSFPYL 375
           G LW FPYL
Sbjct: 40  GNLWRFPYL 48


>AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 646

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -3

Query: 401 GILWSFPYL 375
           G LW FPYL
Sbjct: 93  GNLWRFPYL 101


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,545
Number of Sequences: 438
Number of extensions: 2443
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12312900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)