Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0007_F03
         (636 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC101486-1|AAI01487.1| 1031|Homo sapiens zinc finger protein 445...    31   2.6  
AY295873-1|AAP50258.1| 1031|Homo sapiens zinc finger protein pro...    31   2.6  
AY262260-1|AAP36990.1| 1031|Homo sapiens zinc finger protein pro...    31   2.6  
AF161353-1|AAF28913.1|  137|Homo sapiens HSPC090 protein.              31   2.6  
BC006131-1|AAH06131.1|  581|Homo sapiens chromosome 10 open read...    31   3.4  
AL139243-4|CAI14149.1|  581|Homo sapiens chromosome 10 open read...    31   3.4  
AK075265-1|BAC11507.1|  581|Homo sapiens protein ( Homo sapiens ...    31   3.4  

>BC101486-1|AAI01487.1| 1031|Homo sapiens zinc finger protein 445
           protein.
          Length = 1031

 Score = 31.5 bits (68), Expect = 2.6
 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
 Frame = +2

Query: 335 WWERHPDSLARATERILSALSQLRTLIPGH---YLLHHKPSHGENAI 466
           WW R PD L++A    L  L Q  +++PG    ++  H P  GE A+
Sbjct: 82  WWLR-PDVLSKAQILELLVLEQFLSILPGELRVWVQLHNPESGEEAV 127


>AY295873-1|AAP50258.1| 1031|Homo sapiens zinc finger protein
           protein.
          Length = 1031

 Score = 31.5 bits (68), Expect = 2.6
 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
 Frame = +2

Query: 335 WWERHPDSLARATERILSALSQLRTLIPGH---YLLHHKPSHGENAI 466
           WW R PD L++A    L  L Q  +++PG    ++  H P  GE A+
Sbjct: 82  WWLR-PDVLSKAQILELLVLEQFLSILPGELRVWVQLHNPESGEEAV 127


>AY262260-1|AAP36990.1| 1031|Homo sapiens zinc finger protein
           protein.
          Length = 1031

 Score = 31.5 bits (68), Expect = 2.6
 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
 Frame = +2

Query: 335 WWERHPDSLARATERILSALSQLRTLIPGH---YLLHHKPSHGENAI 466
           WW R PD L++A    L  L Q  +++PG    ++  H P  GE A+
Sbjct: 82  WWLR-PDVLSKAQILELLVLEQFLSILPGELRVWVQLHNPESGEEAV 127


>AF161353-1|AAF28913.1|  137|Homo sapiens HSPC090 protein.
          Length = 137

 Score = 31.5 bits (68), Expect = 2.6
 Identities = 18/55 (32%), Positives = 28/55 (50%)
 Frame = +2

Query: 251 RQNVSLLNVRVEGATGEVGTFEMISSEEWWERHPDSLARATERILSALSQLRTLI 415
           +Q+V L+N+R  G  G  G+ +  + E   E   DSLA   E +      LRT++
Sbjct: 76  KQSVYLMNLRKSGTLGHPGSVDETTYERLAEESLDSLAEFFEDLADKPYTLRTMM 130


>BC006131-1|AAH06131.1|  581|Homo sapiens chromosome 10 open reading
           frame 33 protein.
          Length = 581

 Score = 31.1 bits (67), Expect = 3.4
 Identities = 12/37 (32%), Positives = 21/37 (56%)
 Frame = +2

Query: 329 EEWWERHPDSLARATERILSALSQLRTLIPGHYLLHH 439
           ++W+E  P     AT+ ++ A++   T   G+ LLHH
Sbjct: 232 DQWFESEPLKATLATDAVIGAMTSPHTPGSGYVLLHH 268


>AL139243-4|CAI14149.1|  581|Homo sapiens chromosome 10 open reading
           frame 33 protein.
          Length = 581

 Score = 31.1 bits (67), Expect = 3.4
 Identities = 12/37 (32%), Positives = 21/37 (56%)
 Frame = +2

Query: 329 EEWWERHPDSLARATERILSALSQLRTLIPGHYLLHH 439
           ++W+E  P     AT+ ++ A++   T   G+ LLHH
Sbjct: 232 DQWFESEPLKATLATDAVIGAMTSPHTPGSGYVLLHH 268


>AK075265-1|BAC11507.1|  581|Homo sapiens protein ( Homo sapiens
           cDNA FLJ90784 fis, clone THYRO1001456. ).
          Length = 581

 Score = 31.1 bits (67), Expect = 3.4
 Identities = 12/37 (32%), Positives = 21/37 (56%)
 Frame = +2

Query: 329 EEWWERHPDSLARATERILSALSQLRTLIPGHYLLHH 439
           ++W+E  P     AT+ ++ A++   T   G+ LLHH
Sbjct: 232 DQWFESEPLKATLATDAVIGAMTSPHTPGSGYVLLHH 268


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,659,317
Number of Sequences: 237096
Number of extensions: 2111870
Number of successful extensions: 9554
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9346
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9554
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6972732040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)