Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0007_F03
(636 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U29082-3|AAT92083.1| 1178|Caenorhabditis elegans Troponin t prot... 29 2.8
U50071-6|AAQ91911.1| 1004|Caenorhabditis elegans Uncoordinated p... 29 3.7
U50071-5|AAA93443.1| 2039|Caenorhabditis elegans Uncoordinated p... 29 3.7
U50071-4|AAM75382.1| 1841|Caenorhabditis elegans Uncoordinated p... 29 3.7
U50071-3|AAA93444.1| 1867|Caenorhabditis elegans Uncoordinated p... 29 3.7
U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated p... 29 3.7
U39847-3|AAB41826.1| 1815|Caenorhabditis elegans AO49 ankyrin pr... 29 3.7
U39847-2|AAB41828.1| 1867|Caenorhabditis elegans AO66 ankyrin pr... 29 3.7
U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin pr... 29 3.7
U21734-1|AAA85854.1| 1786|Caenorhabditis elegans UNC-44 protein. 29 3.7
U21731-1|AAA85852.1| 985|Caenorhabditis elegans UNC-44 protein. 29 3.7
Z81494-5|CAB04053.1| 419|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z82089-1|CAB05002.1| 983|Caenorhabditis elegans Hypothetical pr... 27 8.5
Z81511-2|CAB04167.1| 983|Caenorhabditis elegans Hypothetical pr... 27 8.5
>U29082-3|AAT92083.1| 1178|Caenorhabditis elegans Troponin t protein
3, isoform b protein.
Length = 1178
Score = 29.1 bits (62), Expect = 2.8
Identities = 21/80 (26%), Positives = 39/80 (48%)
Frame = -1
Query: 381 IRSVARAKESGCLSHHSSDDIISNVPTSPVAPSTRTFKSDTF*RSLRERDKLSILLSCIL 202
+R+ + + +SG + + SD SN +P A +D F RE + + I+ + I+
Sbjct: 223 VRTPSSSSDSGLSTDNDSDR--SNAEAAPPADPPSVDSTDFF-SFEREEEDIQIVHNYIV 279
Query: 201 LAPISNWYSKIGSRITSSLD 142
A + +YS+ + SLD
Sbjct: 280 TAKVKAYYSEKLKNVEFSLD 299
>U50071-6|AAQ91911.1| 1004|Caenorhabditis elegans Uncoordinated
protein 44, isoform g protein.
Length = 1004
Score = 28.7 bits (61), Expect = 3.7
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +3
Query: 369 LLNGYSQP*VNSGH*SPDTTFCIISRVMVKTPFCTS 476
L NG + P +NSG SP+ F I+ V +P TS
Sbjct: 891 LENGGAIPKINSGGMSPEKEFAKIAPVATSSPIATS 926
>U50071-5|AAA93443.1| 2039|Caenorhabditis elegans Uncoordinated
protein 44, isoform a protein.
Length = 2039
Score = 28.7 bits (61), Expect = 3.7
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +3
Query: 369 LLNGYSQP*VNSGH*SPDTTFCIISRVMVKTPFCTS 476
L NG + P +NSG SP+ F I+ V +P TS
Sbjct: 891 LENGGAIPKINSGGMSPEKEFAKIAPVATSSPIATS 926
>U50071-4|AAM75382.1| 1841|Caenorhabditis elegans Uncoordinated
protein 44, isoform e protein.
Length = 1841
Score = 28.7 bits (61), Expect = 3.7
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +3
Query: 369 LLNGYSQP*VNSGH*SPDTTFCIISRVMVKTPFCTS 476
L NG + P +NSG SP+ F I+ V +P TS
Sbjct: 891 LENGGAIPKINSGGMSPEKEFAKIAPVATSSPIATS 926
>U50071-3|AAA93444.1| 1867|Caenorhabditis elegans Uncoordinated
protein 44, isoform c protein.
Length = 1867
Score = 28.7 bits (61), Expect = 3.7
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +3
Query: 369 LLNGYSQP*VNSGH*SPDTTFCIISRVMVKTPFCTS 476
L NG + P +NSG SP+ F I+ V +P TS
Sbjct: 891 LENGGAIPKINSGGMSPEKEFAKIAPVATSSPIATS 926
>U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated
protein 44, isoform f protein.
Length = 6994
Score = 28.7 bits (61), Expect = 3.7
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +3
Query: 369 LLNGYSQP*VNSGH*SPDTTFCIISRVMVKTPFCTS 476
L NG + P +NSG SP+ F I+ V +P TS
Sbjct: 891 LENGGAIPKINSGGMSPEKEFAKIAPVATSSPIATS 926
>U39847-3|AAB41826.1| 1815|Caenorhabditis elegans AO49 ankyrin
protein.
Length = 1815
Score = 28.7 bits (61), Expect = 3.7
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +3
Query: 369 LLNGYSQP*VNSGH*SPDTTFCIISRVMVKTPFCTS 476
L NG + P +NSG SP+ F I+ V +P TS
Sbjct: 891 LENGGAIPKINSGGMSPEKEFAKIAPVATSSPIATS 926
>U39847-2|AAB41828.1| 1867|Caenorhabditis elegans AO66 ankyrin
protein.
Length = 1867
Score = 28.7 bits (61), Expect = 3.7
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +3
Query: 369 LLNGYSQP*VNSGH*SPDTTFCIISRVMVKTPFCTS 476
L NG + P +NSG SP+ F I+ V +P TS
Sbjct: 891 LENGGAIPKINSGGMSPEKEFAKIAPVATSSPIATS 926
>U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin
protein.
Length = 6994
Score = 28.7 bits (61), Expect = 3.7
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +3
Query: 369 LLNGYSQP*VNSGH*SPDTTFCIISRVMVKTPFCTS 476
L NG + P +NSG SP+ F I+ V +P TS
Sbjct: 891 LENGGAIPKINSGGMSPEKEFAKIAPVATSSPIATS 926
>U21734-1|AAA85854.1| 1786|Caenorhabditis elegans UNC-44 protein.
Length = 1786
Score = 28.7 bits (61), Expect = 3.7
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +3
Query: 369 LLNGYSQP*VNSGH*SPDTTFCIISRVMVKTPFCTS 476
L NG + P +NSG SP+ F I+ V +P TS
Sbjct: 891 LENGGAIPKINSGGMSPEKEFAKIAPVATSSPIATS 926
>U21731-1|AAA85852.1| 985|Caenorhabditis elegans UNC-44 protein.
Length = 985
Score = 28.7 bits (61), Expect = 3.7
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +3
Query: 369 LLNGYSQP*VNSGH*SPDTTFCIISRVMVKTPFCTS 476
L NG + P +NSG SP+ F I+ V +P TS
Sbjct: 61 LENGGAIPKINSGGMSPEKEFAKIAPVATSSPIATS 96
>Z81494-5|CAB04053.1| 419|Caenorhabditis elegans Hypothetical
protein F02E9.7 protein.
Length = 419
Score = 27.9 bits (59), Expect = 6.4
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 6/56 (10%)
Frame = +2
Query: 305 GTFEMISSEEWWERHPDSLARATERI------LSALSQLRTLIPGHYLLHHKPSHG 454
G EM+ +E R P ++ A E+ L A S +I GHY +H SHG
Sbjct: 221 GFIEMLRNESHDPRGPVNITAAEEQWAWLENNLEASSAQYLIISGHYPVHSMSSHG 276
>Z82089-1|CAB05002.1| 983|Caenorhabditis elegans Hypothetical
protein ZK270.1 protein.
Length = 983
Score = 27.5 bits (58), Expect = 8.5
Identities = 12/44 (27%), Positives = 20/44 (45%)
Frame = -1
Query: 222 ILLSCILLAPISNWYSKIGSRITSSLDCLTLCEQWIIMS*ASLS 91
+ L I P W S +G+ + ++ C W ++ ASLS
Sbjct: 770 VYLDLIDNMPTDTWQSILGTLVCMAMVCFVFLNNWFTVAIASLS 813
>Z81511-2|CAB04167.1| 983|Caenorhabditis elegans Hypothetical
protein ZK270.1 protein.
Length = 983
Score = 27.5 bits (58), Expect = 8.5
Identities = 12/44 (27%), Positives = 20/44 (45%)
Frame = -1
Query: 222 ILLSCILLAPISNWYSKIGSRITSSLDCLTLCEQWIIMS*ASLS 91
+ L I P W S +G+ + ++ C W ++ ASLS
Sbjct: 770 VYLDLIDNMPTDTWQSILGTLVCMAMVCFVFLNNWFTVAIASLS 813
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,330,969
Number of Sequences: 27780
Number of extensions: 313533
Number of successful extensions: 860
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 827
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 860
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1406256614
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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